RNA–Protein interactions for RNA: ENST00000598775.1

SPTBN4-213, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-213ENST00000598775 SIRT1Q96EB6 747 aa22.62■■□□□ 1.21
SPTBN4-213ENST00000598775 RAB3GAP2Q9H2M9 1393 aa22.62■■□□□ 1.21
SPTBN4-213ENST00000598775 NUTM2BA6NNL0 878 aaPredicted RBP22.61■■□□□ 1.21
SPTBN4-213ENST00000598775 NUTM2EB1AL46 878 aaPredicted RBP22.61■■□□□ 1.21
SPTBN4-213ENST00000598775 NUTM2AQ8IVF1 878 aaPredicted RBP22.61■■□□□ 1.21
SPTBN4-213ENST00000598775 MYOM2P54296 1465 aa22.6■■□□□ 1.21
SPTBN4-213ENST00000598775 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
SPTBN4-213ENST00000598775 C14orf93Q9H972 538 aaKnown RBP22.59■■□□□ 1.21
SPTBN4-213ENST00000598775 YTHDC2Q9H6S0 1430 aaKnown RBP22.58■■□□□ 1.21
SPTBN4-213ENST00000598775 AFF2P51816 1311 aa22.57■■□□□ 1.2
SPTBN4-213ENST00000598775 HRCP23327 699 aa22.57■■□□□ 1.2
SPTBN4-213ENST00000598775 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
SPTBN4-213ENST00000598775 COL22A1Q8NFW1 1626 aaPredicted RBP22.57■■□□□ 1.2
SPTBN4-213ENST00000598775 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
SPTBN4-213ENST00000598775 RXRBP28702 533 aa22.56■■□□□ 1.2
SPTBN4-213ENST00000598775 WAPLQ7Z5K2 1190 aa22.56■■□□□ 1.2
SPTBN4-213ENST00000598775 STK26Q9P289 416 aa22.56■■□□□ 1.2
SPTBN4-213ENST00000598775 ESCO1Q5FWF5 840 aa22.54■■□□□ 1.2
SPTBN4-213ENST00000598775 PXDNQ92626 1479 aa22.54■■□□□ 1.2
SPTBN4-213ENST00000598775 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
SPTBN4-213ENST00000598775 C8orf37Q96NL8 207 aa22.52■■□□□ 1.2
SPTBN4-213ENST00000598775 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
SPTBN4-213ENST00000598775 FMN2Q9NZ56 1722 aa22.51■■□□□ 1.19
SPTBN4-213ENST00000598775 CFAP70Q5T0N1 1121 aa22.49■■□□□ 1.19
SPTBN4-213ENST00000598775 STAC3Q96MF2 364 aa22.49■■□□□ 1.19
SPTBN4-213ENST00000598775 DLC1Q96QB1 1528 aa22.48■■□□□ 1.19
SPTBN4-213ENST00000598775 QTRT2Q9H974 415 aaKnown RBP22.48■■□□□ 1.19
SPTBN4-213ENST00000598775 KIF1AQ12756 1690 aa22.48■■□□□ 1.19
SPTBN4-213ENST00000598775 FOXO3O43524 673 aa22.47■■□□□ 1.19
SPTBN4-213ENST00000598775 RBM6P78332 1123 aaKnown RBP22.47■■□□□ 1.19
SPTBN4-213ENST00000598775 FNBP4Q8N3X1 1017 aaPredicted RBP22.47■■□□□ 1.19
SPTBN4-213ENST00000598775 ADAMTS2O95450 1211 aa22.46■■□□□ 1.19
SPTBN4-213ENST00000598775 NGLY1Q96IV0 654 aa22.46■■□□□ 1.19
SPTBN4-213ENST00000598775 UPF1Q92900 1129 aaKnown RBP eCLIP22.45■■□□□ 1.18
SPTBN4-213ENST00000598775 ADGRB1O14514 1584 aa22.44■■□□□ 1.18
SPTBN4-213ENST00000598775 RGS12O14924 1447 aa22.41■■□□□ 1.18
SPTBN4-213ENST00000598775 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
SPTBN4-213ENST00000598775 NUTM2FA1L443 756 aa22.41■■□□□ 1.18
SPTBN4-213ENST00000598775 PRAM1Q96QH2 718 aa22.41■■□□□ 1.18
SPTBN4-213ENST00000598775 ADGRB2O60241 1585 aa22.41■■□□□ 1.18
SPTBN4-213ENST00000598775 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
SPTBN4-213ENST00000598775 USP21Q9UK80 565 aa22.4■■□□□ 1.18
SPTBN4-213ENST00000598775 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
SPTBN4-213ENST00000598775 ATRNO75882 1429 aa22.39■■□□□ 1.17
SPTBN4-213ENST00000598775 ANKARQ7Z5J8 1434 aa22.39■■□□□ 1.17
SPTBN4-213ENST00000598775 XPCQ01831 940 aaPredicted RBP22.38■■□□□ 1.17
SPTBN4-213ENST00000598775 RGPD8O14715 1765 aaPredicted RBP22.38■■□□□ 1.17
SPTBN4-213ENST00000598775 PHF8Q9UPP1 1060 aa22.37■■□□□ 1.17
SPTBN4-213ENST00000598775 BCL9LQ86UU0 1499 aa22.36■■□□□ 1.17
SPTBN4-213ENST00000598775 KRT28Q7Z3Y7 464 aa22.36■■□□□ 1.17
SPTBN4-213ENST00000598775 DCAF11Q8TEB1 546 aa22.36■■□□□ 1.17
SPTBN4-213ENST00000598775 POGKQ9P215 609 aa22.35■■□□□ 1.17
SPTBN4-213ENST00000598775 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
SPTBN4-213ENST00000598775 PSME1Q06323 249 aa22.34■■□□□ 1.17
SPTBN4-213ENST00000598775 TNS3Q68CZ2 1445 aa22.33■■□□□ 1.17
SPTBN4-213ENST00000598775 USP32Q8NFA0 1604 aa22.33■■□□□ 1.17
SPTBN4-213ENST00000598775 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.17
SPTBN4-213ENST00000598775 EIF3AQ14152 1382 aaKnown RBP22.32■■□□□ 1.16
SPTBN4-213ENST00000598775 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
SPTBN4-213ENST00000598775 TRAK1Q9UPV9 953 aa22.31■■□□□ 1.16
SPTBN4-213ENST00000598775 KDM2AQ9Y2K7 1162 aa22.31■■□□□ 1.16
SPTBN4-213ENST00000598775 SLIT2O94813 1529 aa22.31■■□□□ 1.16
SPTBN4-213ENST00000598775 ARHGEF10O15013 1369 aa22.28■■□□□ 1.16
SPTBN4-213ENST00000598775 TULP4Q9NRJ4 1543 aa22.27■■□□□ 1.16
SPTBN4-213ENST00000598775 ATAD2Q6PL18 1390 aa22.26■■□□□ 1.15
SPTBN4-213ENST00000598775 WASLO00401 505 aaPredicted RBP22.26■■□□□ 1.15
SPTBN4-213ENST00000598775 UNC5CLQ8IV45 518 aa22.26■■□□□ 1.15
SPTBN4-213ENST00000598775 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
SPTBN4-213ENST00000598775 EP400Q96L91 3159 aa22.26■■□□□ 1.15
SPTBN4-213ENST00000598775 ARHGEF28Q8N1W1 1705 aaKnown RBP22.25■■□□□ 1.15
SPTBN4-213ENST00000598775 KIAA1210Q9ULL0 1709 aa22.25■■□□□ 1.15
SPTBN4-213ENST00000598775 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
SPTBN4-213ENST00000598775 PRR36Q9H6K5 1346 aa22.24■■□□□ 1.15
SPTBN4-213ENST00000598775 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
SPTBN4-213ENST00000598775 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
SPTBN4-213ENST00000598775 MINK1Q8N4C8 1332 aaPredicted RBP22.23■■□□□ 1.15
SPTBN4-213ENST00000598775 PMFBP1Q8TBY8 1022 aa22.22■■□□□ 1.15
SPTBN4-213ENST00000598775 NWD2Q9ULI1 1742 aa22.22■■□□□ 1.15
SPTBN4-213ENST00000598775 ALS2Q96Q42 1657 aa22.2■■□□□ 1.15
SPTBN4-213ENST00000598775 GPRASP1Q5JY77 1395 aa22.2■■□□□ 1.14
SPTBN4-213ENST00000598775 RALGAPBQ86X10 1494 aa22.2■■□□□ 1.14
SPTBN4-213ENST00000598775 GLI3P10071 1580 aa22.2■■□□□ 1.14
SPTBN4-213ENST00000598775 HAP1P54257 671 aaPredicted RBP22.18■■□□□ 1.14
SPTBN4-213ENST00000598775 CABLES1Q8TDN4 633 aa22.18■■□□□ 1.14
SPTBN4-213ENST00000598775 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
SPTBN4-213ENST00000598775 ATP7BP35670 1465 aa22.17■■□□□ 1.14
SPTBN4-213ENST00000598775 VPS72Q15906 364 aa22.17■■□□□ 1.14
SPTBN4-213ENST00000598775 PLCH1Q4KWH8 1693 aa22.17■■□□□ 1.14
SPTBN4-213ENST00000598775 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
SPTBN4-213ENST00000598775 ONECUT3O60422 494 aaPredicted RBP22.15■■□□□ 1.14
SPTBN4-213ENST00000598775 LMOD2Q6P5Q4 547 aa22.15■■□□□ 1.14
SPTBN4-213ENST00000598775 FAM83GA6ND36 823 aa22.13■■□□□ 1.13
SPTBN4-213ENST00000598775 NGDNQ8NEJ9 315 aaKnown RBP22.13■■□□□ 1.13
SPTBN4-213ENST00000598775 NUDT16Q96DE0 195 aaKnown RBP22.13■■□□□ 1.13
SPTBN4-213ENST00000598775 CRYBG1Q9Y4K1 1723 aa22.12■■□□□ 1.13
SPTBN4-213ENST00000598775 POLR3AO14802 1390 aaPredicted RBP22.11■■□□□ 1.13
SPTBN4-213ENST00000598775 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
SPTBN4-213ENST00000598775 NRAPQ86VF7 1730 aa22.1■■□□□ 1.13
SPTBN4-213ENST00000598775 CDK19Q9BWU1 502 aa22.1■■□□□ 1.13
SPTBN4-213ENST00000598775 TOPAZ1Q8N9V7 1692 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms