RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 KNDC1Q76NI1 1749 aa20.18■□□□□ 0.82
SOX2-OT-227ENST00000597651 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
SOX2-OT-227ENST00000597651 HRCP23327 699 aa20.17■□□□□ 0.82
SOX2-OT-227ENST00000597651 SOS2Q07890 1332 aaPredicted RBP20.17■□□□□ 0.82
SOX2-OT-227ENST00000597651 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
SOX2-OT-227ENST00000597651 MEX3CQ5U5Q3 659 aaKnown RBP20.16■□□□□ 0.82
SOX2-OT-227ENST00000597651 STK26Q9P289 416 aa20.16■□□□□ 0.82
SOX2-OT-227ENST00000597651 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
SOX2-OT-227ENST00000597651 YTHDC2Q9H6S0 1430 aaKnown RBP20.12■□□□□ 0.81
SOX2-OT-227ENST00000597651 AFF2P51816 1311 aa20.12■□□□□ 0.81
SOX2-OT-227ENST00000597651 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
SOX2-OT-227ENST00000597651 MYOM2P54296 1465 aa20.11■□□□□ 0.81
SOX2-OT-227ENST00000597651 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
SOX2-OT-227ENST00000597651 PXDNQ92626 1479 aa20.11■□□□□ 0.81
SOX2-OT-227ENST00000597651 TRIM26Q12899 539 aaPredicted RBP20.1■□□□□ 0.81
SOX2-OT-227ENST00000597651 CFAP70Q5T0N1 1121 aa20.1■□□□□ 0.81
SOX2-OT-227ENST00000597651 FMN2Q9NZ56 1722 aa20.1■□□□□ 0.81
SOX2-OT-227ENST00000597651 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
SOX2-OT-227ENST00000597651 NUTM2FA1L443 756 aa20.09■□□□□ 0.81
SOX2-OT-227ENST00000597651 ESCO1Q5FWF5 840 aa20.08■□□□□ 0.81
SOX2-OT-227ENST00000597651 C8orf37Q96NL8 207 aa20.07■□□□□ 0.8
SOX2-OT-227ENST00000597651 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-227ENST00000597651 XPCQ01831 940 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-227ENST00000597651 ADGRB1O14514 1584 aa20.05■□□□□ 0.8
SOX2-OT-227ENST00000597651 FOXO3O43524 673 aa20.05■□□□□ 0.8
SOX2-OT-227ENST00000597651 ADAMTS2O95450 1211 aa20.05■□□□□ 0.8
SOX2-OT-227ENST00000597651 RXRBP28702 533 aa20.04■□□□□ 0.8
SOX2-OT-227ENST00000597651 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
SOX2-OT-227ENST00000597651 CDK12Q9NYV4 1490 aaPredicted RBP20.04■□□□□ 0.8
SOX2-OT-227ENST00000597651 UPF1Q92900 1129 aaKnown RBP eCLIP20.02■□□□□ 0.8
SOX2-OT-227ENST00000597651 RGS12O14924 1447 aa20.02■□□□□ 0.79
SOX2-OT-227ENST00000597651 NPHP3Q7Z494 1330 aa20.02■□□□□ 0.79
SOX2-OT-227ENST00000597651 QTRT2Q9H974 415 aaKnown RBP20.01■□□□□ 0.79
SOX2-OT-227ENST00000597651 USP32Q8NFA0 1604 aa20■□□□□ 0.79
SOX2-OT-227ENST00000597651 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
SOX2-OT-227ENST00000597651 DLC1Q96QB1 1528 aa19.99■□□□□ 0.79
SOX2-OT-227ENST00000597651 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
SOX2-OT-227ENST00000597651 MARF1Q9Y4F3 1742 aaKnown RBP19.99■□□□□ 0.79
SOX2-OT-227ENST00000597651 SAFB2Q14151 953 aaKnown RBP eCLIP19.98■□□□□ 0.79
SOX2-OT-227ENST00000597651 FNBP4Q8N3X1 1017 aaPredicted RBP19.98■□□□□ 0.79
SOX2-OT-227ENST00000597651 PRAM1Q96QH2 718 aa19.98■□□□□ 0.79
SOX2-OT-227ENST00000597651 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
SOX2-OT-227ENST00000597651 RBM6P78332 1123 aaKnown RBP19.96■□□□□ 0.79
SOX2-OT-227ENST00000597651 BCL9LQ86UU0 1499 aa19.96■□□□□ 0.79
SOX2-OT-227ENST00000597651 SPATA31A3Q5VYP0 1347 aa19.95■□□□□ 0.78
SOX2-OT-227ENST00000597651 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
SOX2-OT-227ENST00000597651 DCAF11Q8TEB1 546 aa19.94■□□□□ 0.78
SOX2-OT-227ENST00000597651 USP21Q9UK80 565 aa19.94■□□□□ 0.78
SOX2-OT-227ENST00000597651 KDM2AQ9Y2K7 1162 aa19.94■□□□□ 0.78
SOX2-OT-227ENST00000597651 ATRNO75882 1429 aa19.93■□□□□ 0.78
SOX2-OT-227ENST00000597651 KRT28Q7Z3Y7 464 aa19.92■□□□□ 0.78
SOX2-OT-227ENST00000597651 TRAK1Q9UPV9 953 aa19.92■□□□□ 0.78
SOX2-OT-227ENST00000597651 PHF8Q9UPP1 1060 aa19.91■□□□□ 0.78
SOX2-OT-227ENST00000597651 PRR36Q9H6K5 1346 aa19.91■□□□□ 0.78
SOX2-OT-227ENST00000597651 EP400Q96L91 3159 aa19.91■□□□□ 0.78
SOX2-OT-227ENST00000597651 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
SOX2-OT-227ENST00000597651 ARHGEF28Q8N1W1 1705 aaKnown RBP19.88■□□□□ 0.77
SOX2-OT-227ENST00000597651 ABCA3Q99758 1704 aa19.88■□□□□ 0.77
SOX2-OT-227ENST00000597651 SLIT2O94813 1529 aa19.88■□□□□ 0.77
SOX2-OT-227ENST00000597651 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
SOX2-OT-227ENST00000597651 TRPM3Q9HCF6 1732 aaPredicted RBP19.88■□□□□ 0.77
SOX2-OT-227ENST00000597651 TNS3Q68CZ2 1445 aa19.87■□□□□ 0.77
SOX2-OT-227ENST00000597651 ANKARQ7Z5J8 1434 aa19.87■□□□□ 0.77
SOX2-OT-227ENST00000597651 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
SOX2-OT-227ENST00000597651 CABLES1Q8TDN4 633 aa19.87■□□□□ 0.77
SOX2-OT-227ENST00000597651 POGKQ9P215 609 aa19.87■□□□□ 0.77
SOX2-OT-227ENST00000597651 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
SOX2-OT-227ENST00000597651 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.86■□□□□ 0.77
SOX2-OT-227ENST00000597651 GLI3P10071 1580 aa19.85■□□□□ 0.77
SOX2-OT-227ENST00000597651 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
SOX2-OT-227ENST00000597651 TULP4Q9NRJ4 1543 aa19.83■□□□□ 0.77
SOX2-OT-227ENST00000597651 ALS2Q96Q42 1657 aa19.82■□□□□ 0.76
SOX2-OT-227ENST00000597651 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SOX2-OT-227ENST00000597651 WASLO00401 505 aaPredicted RBP19.81■□□□□ 0.76
SOX2-OT-227ENST00000597651 STAC3Q96MF2 364 aa19.81■□□□□ 0.76
SOX2-OT-227ENST00000597651 PLCH1Q4KWH8 1693 aa19.81■□□□□ 0.76
SOX2-OT-227ENST00000597651 PLEKHG5O94827 1062 aa19.8■□□□□ 0.76
SOX2-OT-227ENST00000597651 GJD4Q96KN9 370 aaPredicted RBP19.8■□□□□ 0.76
SOX2-OT-227ENST00000597651 RALGAPBQ86X10 1494 aa19.79■□□□□ 0.76
SOX2-OT-227ENST00000597651 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
SOX2-OT-227ENST00000597651 PSME1Q06323 249 aa19.79■□□□□ 0.76
SOX2-OT-227ENST00000597651 UNC5CLQ8IV45 518 aa19.79■□□□□ 0.76
SOX2-OT-227ENST00000597651 ATP7BP35670 1465 aa19.79■□□□□ 0.76
SOX2-OT-227ENST00000597651 NBPF1Q3BBV0 1214 aa19.78■□□□□ 0.76
SOX2-OT-227ENST00000597651 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
SOX2-OT-227ENST00000597651 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
SOX2-OT-227ENST00000597651 BRWD3Q6RI45 1802 aa19.76■□□□□ 0.75
SOX2-OT-227ENST00000597651 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
SOX2-OT-227ENST00000597651 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
SOX2-OT-227ENST00000597651 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
SOX2-OT-227ENST00000597651 FAM83GA6ND36 823 aa19.75■□□□□ 0.75
SOX2-OT-227ENST00000597651 LMOD2Q6P5Q4 547 aa19.75■□□□□ 0.75
SOX2-OT-227ENST00000597651 SRCAPQ6ZRS2 3230 aa19.74■□□□□ 0.75
SOX2-OT-227ENST00000597651 NRAPQ86VF7 1730 aa19.74■□□□□ 0.75
SOX2-OT-227ENST00000597651 TOPAZ1Q8N9V7 1692 aa19.74■□□□□ 0.75
SOX2-OT-227ENST00000597651 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
SOX2-OT-227ENST00000597651 EIF3AQ14152 1382 aaKnown RBP19.71■□□□□ 0.75
SOX2-OT-227ENST00000597651 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
SOX2-OT-227ENST00000597651 VPS72Q15906 364 aa19.71■□□□□ 0.75
SOX2-OT-227ENST00000597651 CDK19Q9BWU1 502 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms