RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.65
IRF3-213ENST00000596765 CADPS2Q86UW7 1296 aa19.07■□□□□ 0.64
IRF3-213ENST00000596765 ARHGEF28Q8N1W1 1705 aaKnown RBP19.06■□□□□ 0.64
IRF3-213ENST00000596765 ATF3P18847 181 aa19.06■□□□□ 0.64
IRF3-213ENST00000596765 L3MBTL2Q969R5 705 aa19.06■□□□□ 0.64
IRF3-213ENST00000596765 COL16A1Q07092 1604 aaPredicted RBP19.05■□□□□ 0.64
IRF3-213ENST00000596765 DLC1Q96QB1 1528 aa19.05■□□□□ 0.64
IRF3-213ENST00000596765 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
IRF3-213ENST00000596765 NEUROD1Q13562 356 aa19.04■□□□□ 0.64
IRF3-213ENST00000596765 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
IRF3-213ENST00000596765 FMN2Q9NZ56 1722 aa19.04■□□□□ 0.64
IRF3-213ENST00000596765 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
IRF3-213ENST00000596765 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
IRF3-213ENST00000596765 BRINP3Q76B58 766 aa19.03■□□□□ 0.64
IRF3-213ENST00000596765 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
IRF3-213ENST00000596765 SIRT1Q96EB6 747 aa19.02■□□□□ 0.64
IRF3-213ENST00000596765 TIMELESSQ9UNS1 1208 aa19.02■□□□□ 0.64
IRF3-213ENST00000596765 C1orf167Q5SNV9 1468 aa19.02■□□□□ 0.63
IRF3-213ENST00000596765 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
IRF3-213ENST00000596765 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
IRF3-213ENST00000596765 TRAK1Q9UPV9 953 aa18.99■□□□□ 0.63
IRF3-213ENST00000596765 PRAM1Q96QH2 718 aa18.98■□□□□ 0.63
IRF3-213ENST00000596765 ORAI2Q96SN7 254 aa18.98■□□□□ 0.63
IRF3-213ENST00000596765 USP32Q8NFA0 1604 aa18.97■□□□□ 0.63
IRF3-213ENST00000596765 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
IRF3-213ENST00000596765 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
IRF3-213ENST00000596765 ADGRB2O60241 1585 aa18.95■□□□□ 0.62
IRF3-213ENST00000596765 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
IRF3-213ENST00000596765 SHPRHQ149N8 1683 aa18.93■□□□□ 0.62
IRF3-213ENST00000596765 NUTM2FA1L443 756 aa18.93■□□□□ 0.62
IRF3-213ENST00000596765 HIRIP3Q9BW71 556 aaPredicted RBP18.89■□□□□ 0.61
IRF3-213ENST00000596765 POGKQ9P215 609 aa18.89■□□□□ 0.61
IRF3-213ENST00000596765 MINK1Q8N4C8 1332 aaPredicted RBP18.89■□□□□ 0.61
IRF3-213ENST00000596765 RGS17Q9UGC6 210 aaPredicted RBP18.88■□□□□ 0.61
IRF3-213ENST00000596765 QRICH2Q9H0J4 1663 aa18.88■□□□□ 0.61
IRF3-213ENST00000596765 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
IRF3-213ENST00000596765 JCADQ9P266 1359 aa18.87■□□□□ 0.61
IRF3-213ENST00000596765 LRP6O75581 1613 aa18.86■□□□□ 0.61
IRF3-213ENST00000596765 PXDNQ92626 1479 aa18.86■□□□□ 0.61
IRF3-213ENST00000596765 SOS2Q07890 1332 aaPredicted RBP18.86■□□□□ 0.61
IRF3-213ENST00000596765 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
IRF3-213ENST00000596765 KIF1AQ12756 1690 aa18.85■□□□□ 0.61
IRF3-213ENST00000596765 FOXO3O43524 673 aa18.83■□□□□ 0.6
IRF3-213ENST00000596765 GPRASP1Q5JY77 1395 aa18.82■□□□□ 0.6
IRF3-213ENST00000596765 WASLO00401 505 aaPredicted RBP18.82■□□□□ 0.6
IRF3-213ENST00000596765 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
IRF3-213ENST00000596765 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
IRF3-213ENST00000596765 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
IRF3-213ENST00000596765 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
IRF3-213ENST00000596765 ATP7BP35670 1465 aa18.8■□□□□ 0.6
IRF3-213ENST00000596765 RALGAPBQ86X10 1494 aa18.8■□□□□ 0.6
IRF3-213ENST00000596765 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
IRF3-213ENST00000596765 COL22A1Q8NFW1 1626 aaPredicted RBP18.8■□□□□ 0.6
IRF3-213ENST00000596765 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
IRF3-213ENST00000596765 ITSN1Q15811 1721 aa18.8■□□□□ 0.6
IRF3-213ENST00000596765 TRPM3Q9HCF6 1732 aaPredicted RBP18.8■□□□□ 0.6
IRF3-213ENST00000596765 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
IRF3-213ENST00000596765 LRRC59Q96AG4 307 aaKnown RBP18.78■□□□□ 0.6
IRF3-213ENST00000596765 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
IRF3-213ENST00000596765 NPHP3Q7Z494 1330 aa18.77■□□□□ 0.6
IRF3-213ENST00000596765 CENPJQ9HC77 1338 aaPredicted RBP18.77■□□□□ 0.6
IRF3-213ENST00000596765 CDK19Q9BWU1 502 aa18.77■□□□□ 0.6
IRF3-213ENST00000596765 PMFBP1Q8TBY8 1022 aa18.76■□□□□ 0.59
IRF3-213ENST00000596765 SPATA31A6Q5VVP1 1343 aa18.75■□□□□ 0.59
IRF3-213ENST00000596765 MARF1Q9Y4F3 1742 aaKnown RBP18.75■□□□□ 0.59
IRF3-213ENST00000596765 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
IRF3-213ENST00000596765 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
IRF3-213ENST00000596765 KRT28Q7Z3Y7 464 aa18.73■□□□□ 0.59
IRF3-213ENST00000596765 NUDT16Q96DE0 195 aaKnown RBP18.73■□□□□ 0.59
IRF3-213ENST00000596765 ABCA3Q99758 1704 aa18.73■□□□□ 0.59
IRF3-213ENST00000596765 NUTM2BA6NNL0 878 aaPredicted RBP18.72■□□□□ 0.59
IRF3-213ENST00000596765 NUTM2EB1AL46 878 aaPredicted RBP18.72■□□□□ 0.59
IRF3-213ENST00000596765 NUTM2AQ8IVF1 878 aaPredicted RBP18.72■□□□□ 0.59
IRF3-213ENST00000596765 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
IRF3-213ENST00000596765 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
IRF3-213ENST00000596765 CRYBG1Q9Y4K1 1723 aa18.7■□□□□ 0.58
IRF3-213ENST00000596765 EIF3AQ14152 1382 aaKnown RBP18.69■□□□□ 0.58
IRF3-213ENST00000596765 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
IRF3-213ENST00000596765 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
IRF3-213ENST00000596765 TNS3Q68CZ2 1445 aa18.67■□□□□ 0.58
IRF3-213ENST00000596765 SBNO1A3KN83 1393 aa18.67■□□□□ 0.58
IRF3-213ENST00000596765 AKAP12Q02952 1782 aa18.66■□□□□ 0.58
IRF3-213ENST00000596765 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
IRF3-213ENST00000596765 CCDC61Q9Y6R9 512 aa18.66■□□□□ 0.58
IRF3-213ENST00000596765 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
IRF3-213ENST00000596765 PSME1Q06323 249 aa18.65■□□□□ 0.58
IRF3-213ENST00000596765 SBNO2Q9Y2G9 1366 aa18.65■□□□□ 0.58
IRF3-213ENST00000596765 SRPK2P78362 688 aaKnown RBP18.64■□□□□ 0.57
IRF3-213ENST00000596765 ACEP12821 1306 aa18.64■□□□□ 0.57
IRF3-213ENST00000596765 PPIP5K1Q6PFW1 1433 aa18.64■□□□□ 0.57
IRF3-213ENST00000596765 ADAMTS2O95450 1211 aa18.63■□□□□ 0.57
IRF3-213ENST00000596765 ZNF772Q68DY9 489 aaPredicted RBP18.63■□□□□ 0.57
IRF3-213ENST00000596765 CABLES1Q8TDN4 633 aa18.63■□□□□ 0.57
IRF3-213ENST00000596765 NGDNQ8NEJ9 315 aaKnown RBP18.62■□□□□ 0.57
IRF3-213ENST00000596765 TESK2Q96S53 571 aa18.62■□□□□ 0.57
IRF3-213ENST00000596765 AFF2P51816 1311 aa18.61■□□□□ 0.57
IRF3-213ENST00000596765 EVC2Q86UK5 1308 aa18.61■□□□□ 0.57
IRF3-213ENST00000596765 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
IRF3-213ENST00000596765 CABP1Q9NZU7 370 aa18.6■□□□□ 0.57
IRF3-213ENST00000596765 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms