RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
LINC00343-204ENST00000596398 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
LINC00343-204ENST00000596398 SAMD9Q5K651 1589 aa13□□□□□ -0.33
LINC00343-204ENST00000596398 EPAS1Q99814 870 aa13□□□□□ -0.33
LINC00343-204ENST00000596398 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
LINC00343-204ENST00000596398 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
LINC00343-204ENST00000596398 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
LINC00343-204ENST00000596398 PIP4K2BP78356 416 aa12.97□□□□□ -0.33
LINC00343-204ENST00000596398 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
LINC00343-204ENST00000596398 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
LINC00343-204ENST00000596398 C6orf132Q5T0Z8 1188 aa12.96□□□□□ -0.33
LINC00343-204ENST00000596398 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
LINC00343-204ENST00000596398 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
LINC00343-204ENST00000596398 DDX12PQ92771 950 aa12.94□□□□□ -0.34
LINC00343-204ENST00000596398 PLCH2O75038 1416 aa12.94□□□□□ -0.34
LINC00343-204ENST00000596398 AFAP1Q8N556 730 aa12.93□□□□□ -0.34
LINC00343-204ENST00000596398 ANKK1Q8NFD2 765 aa12.93□□□□□ -0.34
LINC00343-204ENST00000596398 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
LINC00343-204ENST00000596398 KIAA1468Q9P260 1216 aa12.93□□□□□ -0.34
LINC00343-204ENST00000596398 ESF1Q9H501 851 aaKnown RBP12.92□□□□□ -0.34
LINC00343-204ENST00000596398 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
LINC00343-204ENST00000596398 LAPTM4BQ86VI4 370 aa12.91□□□□□ -0.34
LINC00343-204ENST00000596398 ONECUT3O60422 494 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-204ENST00000596398 PDIA6Q15084 440 aa12.9□□□□□ -0.34
LINC00343-204ENST00000596398 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
LINC00343-204ENST00000596398 ABCA6Q8N139 1617 aa12.9□□□□□ -0.34
LINC00343-204ENST00000596398 CDK13Q14004 1512 aaKnown RBP12.89□□□□□ -0.35
LINC00343-204ENST00000596398 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
LINC00343-204ENST00000596398 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
LINC00343-204ENST00000596398 KDM5CP41229 1560 aa12.89□□□□□ -0.35
LINC00343-204ENST00000596398 MYO5CQ9NQX4 1742 aa12.88□□□□□ -0.35
LINC00343-204ENST00000596398 EFCAB2Q5VUJ9 269 aa12.88□□□□□ -0.35
LINC00343-204ENST00000596398 REREQ9P2R6 1566 aa12.87□□□□□ -0.35
LINC00343-204ENST00000596398 TRIM6-TRIM34B2RNG4 842 aa12.87□□□□□ -0.35
LINC00343-204ENST00000596398 BCAMP50895 628 aa12.87□□□□□ -0.35
LINC00343-204ENST00000596398 NBR1Q14596 966 aa12.87□□□□□ -0.35
LINC00343-204ENST00000596398 SUPT6HQ7KZ85 1726 aaKnown RBP12.87□□□□□ -0.35
LINC00343-204ENST00000596398 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-204ENST00000596398 PAXIP1Q6ZW49 1069 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-204ENST00000596398 ZFRQ96KR1 1074 aaKnown RBP12.86□□□□□ -0.35
LINC00343-204ENST00000596398 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
LINC00343-204ENST00000596398 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
LINC00343-204ENST00000596398 AGLP35573 1532 aa12.85□□□□□ -0.35
LINC00343-204ENST00000596398 TOM1O60784 492 aa12.85□□□□□ -0.35
LINC00343-204ENST00000596398 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
LINC00343-204ENST00000596398 E2F4Q16254 413 aa12.85□□□□□ -0.35
LINC00343-204ENST00000596398 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
LINC00343-204ENST00000596398 MAP3K7O43318 606 aa12.84□□□□□ -0.35
LINC00343-204ENST00000596398 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
LINC00343-204ENST00000596398 NPATQ14207 1427 aa12.84□□□□□ -0.35
LINC00343-204ENST00000596398 TCOF1Q13428 1488 aaKnown RBP12.84□□□□□ -0.35
LINC00343-204ENST00000596398 SRCAPQ6ZRS2 3230 aa12.83□□□□□ -0.36
LINC00343-204ENST00000596398 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
LINC00343-204ENST00000596398 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
LINC00343-204ENST00000596398 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
LINC00343-204ENST00000596398 KIF14Q15058 1648 aa12.82□□□□□ -0.36
LINC00343-204ENST00000596398 TSR1Q2NL82 804 aaKnown RBP12.82□□□□□ -0.36
LINC00343-204ENST00000596398 PLA2R1Q13018 1463 aa12.82□□□□□ -0.36
LINC00343-204ENST00000596398 ARHGAP5Q13017 1502 aa12.82□□□□□ -0.36
LINC00343-204ENST00000596398 ZMYM3Q14202 1370 aa12.81□□□□□ -0.36
LINC00343-204ENST00000596398 ALKQ9UM73 1620 aa12.81□□□□□ -0.36
LINC00343-204ENST00000596398 MROH2AA6NES4 1674 aa12.81□□□□□ -0.36
LINC00343-204ENST00000596398 A0A0G2JS52 829 aa12.81□□□□□ -0.36
LINC00343-204ENST00000596398 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
LINC00343-204ENST00000596398 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
LINC00343-204ENST00000596398 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
LINC00343-204ENST00000596398 WDR70Q9NW82 654 aa12.8□□□□□ -0.36
LINC00343-204ENST00000596398 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
LINC00343-204ENST00000596398 RGS20O76081 388 aa12.78□□□□□ -0.36
LINC00343-204ENST00000596398 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
LINC00343-204ENST00000596398 KIDINS220Q9ULH0 1771 aa12.78□□□□□ -0.36
LINC00343-204ENST00000596398 CPS1P31327 1500 aa12.78□□□□□ -0.36
LINC00343-204ENST00000596398 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
LINC00343-204ENST00000596398 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
LINC00343-204ENST00000596398 TSKSQ9UJT2 592 aa12.77□□□□□ -0.37
LINC00343-204ENST00000596398 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.37
LINC00343-204ENST00000596398 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
LINC00343-204ENST00000596398 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
LINC00343-204ENST00000596398 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
LINC00343-204ENST00000596398 CDC42BPBQ9Y5S2 1711 aa12.76□□□□□ -0.37
LINC00343-204ENST00000596398 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
LINC00343-204ENST00000596398 PTPRKQ15262 1439 aa12.74□□□□□ -0.37
LINC00343-204ENST00000596398 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
LINC00343-204ENST00000596398 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
LINC00343-204ENST00000596398 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
LINC00343-204ENST00000596398 POLR1AO95602 1720 aaPredicted RBP12.74□□□□□ -0.37
LINC00343-204ENST00000596398 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
LINC00343-204ENST00000596398 NEURL4Q96JN8 1562 aa12.73□□□□□ -0.37
LINC00343-204ENST00000596398 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
LINC00343-204ENST00000596398 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
LINC00343-204ENST00000596398 ABCC1P33527 1531 aa12.72□□□□□ -0.37
LINC00343-204ENST00000596398 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
LINC00343-204ENST00000596398 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
LINC00343-204ENST00000596398 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
LINC00343-204ENST00000596398 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
LINC00343-204ENST00000596398 PRSS12P56730 875 aa12.71□□□□□ -0.37
LINC00343-204ENST00000596398 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.37
LINC00343-204ENST00000596398 FAM198AQ9UFP1 575 aa12.69□□□□□ -0.38
LINC00343-204ENST00000596398 A2ML1A8K2U0 1454 aa12.69□□□□□ -0.38
LINC00343-204ENST00000596398 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms