RNA–Protein interactions for RNA: ENST00000596125.1

GTPBP3-212, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-212ENST00000596125 MEX3CQ5U5Q3 659 aaKnown RBP29.44■■■□□ 2.3
GTPBP3-212ENST00000596125 POTEAQ6S8J7 498 aa29.43■■■□□ 2.3
GTPBP3-212ENST00000596125 LAMC1P11047 1609 aa29.42■■■□□ 2.3
GTPBP3-212ENST00000596125 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
GTPBP3-212ENST00000596125 ORAI2Q96SN7 254 aa29.4■■■□□ 2.3
GTPBP3-212ENST00000596125 CDC42BPGQ6DT37 1551 aa29.39■■■□□ 2.3
GTPBP3-212ENST00000596125 ESCO1Q5FWF5 840 aa29.39■■■□□ 2.3
GTPBP3-212ENST00000596125 NPHP3Q7Z494 1330 aa29.38■■■□□ 2.29
GTPBP3-212ENST00000596125 ZNF772Q68DY9 489 aaPredicted RBP29.37■■■□□ 2.29
GTPBP3-212ENST00000596125 SOS2Q07890 1332 aaPredicted RBP29.37■■■□□ 2.29
GTPBP3-212ENST00000596125 POGKQ9P215 609 aa29.36■■■□□ 2.29
GTPBP3-212ENST00000596125 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
GTPBP3-212ENST00000596125 KNDC1Q76NI1 1749 aa29.36■■■□□ 2.29
GTPBP3-212ENST00000596125 NHSL1Q5SYE7 1610 aa29.35■■■□□ 2.29
GTPBP3-212ENST00000596125 PRAM1Q96QH2 718 aa29.33■■■□□ 2.29
GTPBP3-212ENST00000596125 PLEKHH1Q9ULM0 1364 aa29.32■■■□□ 2.28
GTPBP3-212ENST00000596125 NUTM2BA6NNL0 878 aaPredicted RBP29.32■■■□□ 2.28
GTPBP3-212ENST00000596125 NUTM2EB1AL46 878 aaPredicted RBP29.32■■■□□ 2.28
GTPBP3-212ENST00000596125 NUTM2AQ8IVF1 878 aaPredicted RBP29.32■■■□□ 2.28
GTPBP3-212ENST00000596125 DDX17Q92841 729 aaKnown RBP29.32■■■□□ 2.28
GTPBP3-212ENST00000596125 DLC1Q96QB1 1528 aa29.3■■■□□ 2.28
GTPBP3-212ENST00000596125 PNPLA6Q8IY17 1366 aa29.29■■■□□ 2.28
GTPBP3-212ENST00000596125 FOXO3O43524 673 aa29.27■■■□□ 2.28
GTPBP3-212ENST00000596125 LRP6O75581 1613 aa29.27■■■□□ 2.28
GTPBP3-212ENST00000596125 TRAK1Q9UPV9 953 aa29.26■■■□□ 2.27
GTPBP3-212ENST00000596125 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
GTPBP3-212ENST00000596125 EIF3AQ14152 1382 aaKnown RBP29.24■■■□□ 2.27
GTPBP3-212ENST00000596125 ADGRB1O14514 1584 aa29.23■■■□□ 2.27
GTPBP3-212ENST00000596125 SAFB2Q14151 953 aaKnown RBP eCLIP29.23■■■□□ 2.27
GTPBP3-212ENST00000596125 PSME1Q06323 249 aa29.21■■■□□ 2.27
GTPBP3-212ENST00000596125 PHF8Q9UPP1 1060 aa29.2■■■□□ 2.26
GTPBP3-212ENST00000596125 ANKARQ7Z5J8 1434 aa29.18■■■□□ 2.26
GTPBP3-212ENST00000596125 NGLY1Q96IV0 654 aa29.16■■■□□ 2.26
GTPBP3-212ENST00000596125 C8orf37Q96NL8 207 aa29.16■■■□□ 2.26
GTPBP3-212ENST00000596125 AFF2P51816 1311 aa29.16■■■□□ 2.26
GTPBP3-212ENST00000596125 FMN2Q9NZ56 1722 aa29.15■■■□□ 2.26
GTPBP3-212ENST00000596125 RXRBP28702 533 aa29.15■■■□□ 2.26
GTPBP3-212ENST00000596125 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
GTPBP3-212ENST00000596125 PXDNQ92626 1479 aa29.14■■■□□ 2.26
GTPBP3-212ENST00000596125 KIF1AQ12756 1690 aa29.12■■■□□ 2.25
GTPBP3-212ENST00000596125 WASLO00401 505 aaPredicted RBP29.12■■■□□ 2.25
GTPBP3-212ENST00000596125 ADAMTS2O95450 1211 aa29.12■■■□□ 2.25
GTPBP3-212ENST00000596125 MINK1Q8N4C8 1332 aaPredicted RBP29.12■■■□□ 2.25
GTPBP3-212ENST00000596125 XPCQ01831 940 aaPredicted RBP29.11■■■□□ 2.25
GTPBP3-212ENST00000596125 SPATA31A3Q5VYP0 1347 aa29.11■■■□□ 2.25
GTPBP3-212ENST00000596125 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
GTPBP3-212ENST00000596125 HIRIP3Q9BW71 556 aaPredicted RBP29.09■■■□□ 2.25
GTPBP3-212ENST00000596125 TRIM26Q12899 539 aaPredicted RBP29.08■■■□□ 2.25
GTPBP3-212ENST00000596125 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
GTPBP3-212ENST00000596125 L3MBTL2Q969R5 705 aa29.07■■■□□ 2.24
GTPBP3-212ENST00000596125 SBNO1A3KN83 1393 aa29.06■■■□□ 2.24
GTPBP3-212ENST00000596125 FNBP4Q8N3X1 1017 aaPredicted RBP29.06■■■□□ 2.24
GTPBP3-212ENST00000596125 RBM6P78332 1123 aaKnown RBP29.05■■■□□ 2.24
GTPBP3-212ENST00000596125 KIAA1210Q9ULL0 1709 aa29.05■■■□□ 2.24
GTPBP3-212ENST00000596125 COL22A1Q8NFW1 1626 aaPredicted RBP29.05■■■□□ 2.24
GTPBP3-212ENST00000596125 GPRASP1Q5JY77 1395 aa29.04■■■□□ 2.24
GTPBP3-212ENST00000596125 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
GTPBP3-212ENST00000596125 USP21Q9UK80 565 aa29.03■■■□□ 2.24
GTPBP3-212ENST00000596125 CDK12Q9NYV4 1490 aaPredicted RBP29.03■■■□□ 2.24
GTPBP3-212ENST00000596125 NEUROD1Q13562 356 aa29.02■■■□□ 2.24
GTPBP3-212ENST00000596125 PMFBP1Q8TBY8 1022 aa29.02■■■□□ 2.24
GTPBP3-212ENST00000596125 SIN3AQ96ST3 1273 aa29.01■■■□□ 2.23
GTPBP3-212ENST00000596125 TRPC5Q9UL62 973 aaPredicted RBP29.01■■■□□ 2.23
GTPBP3-212ENST00000596125 TULP4Q9NRJ4 1543 aa29■■■□□ 2.23
GTPBP3-212ENST00000596125 HAP1P54257 671 aaPredicted RBP29■■■□□ 2.23
GTPBP3-212ENST00000596125 NBPF1Q3BBV0 1214 aa29■■■□□ 2.23
GTPBP3-212ENST00000596125 TNS3Q68CZ2 1445 aa29■■■□□ 2.23
GTPBP3-212ENST00000596125 NGDNQ8NEJ9 315 aaKnown RBP28.99■■■□□ 2.23
GTPBP3-212ENST00000596125 LMOD2Q6P5Q4 547 aa28.97■■■□□ 2.23
GTPBP3-212ENST00000596125 NUDT16Q96DE0 195 aaKnown RBP28.97■■■□□ 2.23
GTPBP3-212ENST00000596125 CDK19Q9BWU1 502 aa28.97■■■□□ 2.23
GTPBP3-212ENST00000596125 UPF1Q92900 1129 aaKnown RBP eCLIP28.96■■■□□ 2.23
GTPBP3-212ENST00000596125 PRR36Q9H6K5 1346 aa28.95■■■□□ 2.23
GTPBP3-212ENST00000596125 CENPJQ9HC77 1338 aaPredicted RBP28.95■■■□□ 2.23
GTPBP3-212ENST00000596125 CCDC61Q9Y6R9 512 aa28.95■■■□□ 2.22
GTPBP3-212ENST00000596125 ARHGEF28Q8N1W1 1705 aaKnown RBP28.91■■■□□ 2.22
GTPBP3-212ENST00000596125 USP32Q8NFA0 1604 aa28.89■■■□□ 2.22
GTPBP3-212ENST00000596125 RGPD8O14715 1765 aaPredicted RBP28.88■■■□□ 2.21
GTPBP3-212ENST00000596125 PLEKHG3A1L390 1219 aa28.87■■■□□ 2.21
GTPBP3-212ENST00000596125 UNC5CLQ8IV45 518 aa28.87■■■□□ 2.21
GTPBP3-212ENST00000596125 ROCK2O75116 1388 aaKnown RBP28.87■■■□□ 2.21
GTPBP3-212ENST00000596125 SRPK2P78362 688 aaKnown RBP28.86■■■□□ 2.21
GTPBP3-212ENST00000596125 ATRNO75882 1429 aa28.86■■■□□ 2.21
GTPBP3-212ENST00000596125 ATP7BP35670 1465 aa28.85■■■□□ 2.21
GTPBP3-212ENST00000596125 PAK3O75914 559 aaPredicted RBP28.85■■■□□ 2.21
GTPBP3-212ENST00000596125 BCL9LQ86UU0 1499 aa28.84■■■□□ 2.21
GTPBP3-212ENST00000596125 CABLES1Q8TDN4 633 aa28.83■■■□□ 2.21
GTPBP3-212ENST00000596125 TONSLQ96HA7 1378 aa28.83■■■□□ 2.21
GTPBP3-212ENST00000596125 GJD4Q96KN9 370 aaPredicted RBP28.82■■■□□ 2.2
GTPBP3-212ENST00000596125 POLR3AO14802 1390 aaPredicted RBP28.82■■■□□ 2.2
GTPBP3-212ENST00000596125 EVC2Q86UK5 1308 aa28.81■■■□□ 2.2
GTPBP3-212ENST00000596125 NBPF8Q3BBV2 869 aa28.81■■■□□ 2.2
GTPBP3-212ENST00000596125 SLIT2O94813 1529 aa28.8■■■□□ 2.2
GTPBP3-212ENST00000596125 ACEP12821 1306 aa28.8■■■□□ 2.2
GTPBP3-212ENST00000596125 ITSN1Q15811 1721 aa28.79■■■□□ 2.2
GTPBP3-212ENST00000596125 BRD4O60885 1362 aaPredicted RBP28.78■■■□□ 2.2
GTPBP3-212ENST00000596125 RGS12O14924 1447 aa28.77■■■□□ 2.2
GTPBP3-212ENST00000596125 MARF1Q9Y4F3 1742 aaKnown RBP28.77■■■□□ 2.2
GTPBP3-212ENST00000596125 PLEKHG5O94827 1062 aa28.75■■■□□ 2.19
GTPBP3-212ENST00000596125 VPS72Q15906 364 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms