RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
SHKBP1-210ENST00000595874 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
SHKBP1-210ENST00000595874 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-210ENST00000595874 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
SHKBP1-210ENST00000595874 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
SHKBP1-210ENST00000595874 C8orf37Q96NL8 207 aa15.1■□□□□ 0.01
SHKBP1-210ENST00000595874 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-210ENST00000595874 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
SHKBP1-210ENST00000595874 SPATA31A6Q5VVP1 1343 aa15.09■□□□□ 0.01
SHKBP1-210ENST00000595874 PNPLA6Q8IY17 1366 aa15.09■□□□□ 0.01
SHKBP1-210ENST00000595874 KNDC1Q76NI1 1749 aa15.09■□□□□ 0.01
SHKBP1-210ENST00000595874 LRRC59Q96AG4 307 aaKnown RBP15.08■□□□□ 0
SHKBP1-210ENST00000595874 PRAM1Q96QH2 718 aa15.08■□□□□ 0
SHKBP1-210ENST00000595874 MYOM2P54296 1465 aa15.08■□□□□ 0
SHKBP1-210ENST00000595874 RGPD8O14715 1765 aaPredicted RBP15.07■□□□□ 0
SHKBP1-210ENST00000595874 FOXO3O43524 673 aa15.07■□□□□ 0
SHKBP1-210ENST00000595874 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
SHKBP1-210ENST00000595874 POGKQ9P215 609 aa15.07■□□□□ 0
SHKBP1-210ENST00000595874 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
SHKBP1-210ENST00000595874 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
SHKBP1-210ENST00000595874 AFF2P51816 1311 aa15.06■□□□□ 0
SHKBP1-210ENST00000595874 ACIN1Q9UKV3 1341 aaKnown RBP15.06■□□□□ 0
SHKBP1-210ENST00000595874 ABCC11Q96J66 1382 aa15.06■□□□□ 0
SHKBP1-210ENST00000595874 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
SHKBP1-210ENST00000595874 TECPR2O15040 1411 aa15.05■□□□□ -0
SHKBP1-210ENST00000595874 NRXN1Q9ULB1 1477 aa15.05■□□□□ -0
SHKBP1-210ENST00000595874 FMN2Q9NZ56 1722 aa15.05■□□□□ -0
SHKBP1-210ENST00000595874 LAMC1P11047 1609 aa15.04■□□□□ -0
SHKBP1-210ENST00000595874 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
SHKBP1-210ENST00000595874 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
SHKBP1-210ENST00000595874 SOS2Q07890 1332 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-210ENST00000595874 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
SHKBP1-210ENST00000595874 ADGRB1O14514 1584 aa15□□□□□ -0.01
SHKBP1-210ENST00000595874 NEUROD1Q13562 356 aa15□□□□□ -0.01
SHKBP1-210ENST00000595874 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
SHKBP1-210ENST00000595874 LMOD2Q6P5Q4 547 aa15□□□□□ -0.01
SHKBP1-210ENST00000595874 SIN3AQ96ST3 1273 aa15□□□□□ -0.01
SHKBP1-210ENST00000595874 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
SHKBP1-210ENST00000595874 HRCP23327 699 aa14.99□□□□□ -0.01
SHKBP1-210ENST00000595874 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
SHKBP1-210ENST00000595874 PXDNQ92626 1479 aa14.99□□□□□ -0.01
SHKBP1-210ENST00000595874 RXRBP28702 533 aa14.98□□□□□ -0.01
SHKBP1-210ENST00000595874 PHF8Q9UPP1 1060 aa14.98□□□□□ -0.01
SHKBP1-210ENST00000595874 QTRT2Q9H974 415 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-210ENST00000595874 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
SHKBP1-210ENST00000595874 CABLES1Q8TDN4 633 aa14.96□□□□□ -0.01
SHKBP1-210ENST00000595874 USP32Q8NFA0 1604 aa14.95□□□□□ -0.02
SHKBP1-210ENST00000595874 HAP1P54257 671 aaPredicted RBP14.95□□□□□ -0.02
SHKBP1-210ENST00000595874 USP21Q9UK80 565 aa14.95□□□□□ -0.02
SHKBP1-210ENST00000595874 DLC1Q96QB1 1528 aa14.95□□□□□ -0.02
SHKBP1-210ENST00000595874 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
SHKBP1-210ENST00000595874 KIF1AQ12756 1690 aa14.94□□□□□ -0.02
SHKBP1-210ENST00000595874 PSME1Q06323 249 aa14.94□□□□□ -0.02
SHKBP1-210ENST00000595874 SIRT1Q96EB6 747 aa14.94□□□□□ -0.02
SHKBP1-210ENST00000595874 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
SHKBP1-210ENST00000595874 COL22A1Q8NFW1 1626 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-210ENST00000595874 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
SHKBP1-210ENST00000595874 RGS12O14924 1447 aa14.91□□□□□ -0.02
SHKBP1-210ENST00000595874 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-210ENST00000595874 PAK3O75914 559 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-210ENST00000595874 L3MBTL2Q969R5 705 aa14.9□□□□□ -0.02
SHKBP1-210ENST00000595874 MARF1Q9Y4F3 1742 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-210ENST00000595874 TNS3Q68CZ2 1445 aa14.89□□□□□ -0.03
SHKBP1-210ENST00000595874 ADGRB2O60241 1585 aa14.89□□□□□ -0.03
SHKBP1-210ENST00000595874 RBM6P78332 1123 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-210ENST00000595874 NGDNQ8NEJ9 315 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-210ENST00000595874 CDK19Q9BWU1 502 aa14.88□□□□□ -0.03
SHKBP1-210ENST00000595874 TULP4Q9NRJ4 1543 aa14.87□□□□□ -0.03
SHKBP1-210ENST00000595874 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
SHKBP1-210ENST00000595874 UPF1Q92900 1129 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHKBP1-210ENST00000595874 NUDT16Q96DE0 195 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-210ENST00000595874 TRPC5Q9UL62 973 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-210ENST00000595874 ANKARQ7Z5J8 1434 aa14.85□□□□□ -0.03
SHKBP1-210ENST00000595874 CCDC9Q9Y3X0 531 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-210ENST00000595874 ABCA3Q99758 1704 aa14.84□□□□□ -0.03
SHKBP1-210ENST00000595874 FNBP4Q8N3X1 1017 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-210ENST00000595874 GPRASP1Q5JY77 1395 aa14.84□□□□□ -0.03
SHKBP1-210ENST00000595874 ATRNO75882 1429 aa14.83□□□□□ -0.03
SHKBP1-210ENST00000595874 TRPM3Q9HCF6 1732 aaPredicted RBP14.83□□□□□ -0.03
SHKBP1-210ENST00000595874 KIAA1210Q9ULL0 1709 aa14.83□□□□□ -0.03
SHKBP1-210ENST00000595874 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
SHKBP1-210ENST00000595874 SRPK2P78362 688 aaKnown RBP14.83□□□□□ -0.04
SHKBP1-210ENST00000595874 STAC3Q96MF2 364 aa14.83□□□□□ -0.04
SHKBP1-210ENST00000595874 CABP2Q9NPB3 220 aa14.83□□□□□ -0.04
SHKBP1-210ENST00000595874 ATP7BP35670 1465 aa14.82□□□□□ -0.04
SHKBP1-210ENST00000595874 PLCH1Q4KWH8 1693 aa14.82□□□□□ -0.04
SHKBP1-210ENST00000595874 QRICH2Q9H0J4 1663 aa14.82□□□□□ -0.04
SHKBP1-210ENST00000595874 SBNO1A3KN83 1393 aa14.82□□□□□ -0.04
SHKBP1-210ENST00000595874 CENPJQ9HC77 1338 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-210ENST00000595874 EIF3AQ14152 1382 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-210ENST00000595874 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 A0A0G2JS52 829 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 MYT1Q01538 1121 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 NBPF8Q3BBV2 869 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 CDK12Q9NYV4 1490 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 TRPM1Q7Z4N2 1603 aa14.8□□□□□ -0.04
SHKBP1-210ENST00000595874 ZBTB7CA1YPR0 619 aa14.79□□□□□ -0.04
SHKBP1-210ENST00000595874 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
SHKBP1-210ENST00000595874 ACEP12821 1306 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms