RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 LRPPRCP42704 1394 aaKnown RBP26.4■■□□□ 1.82
PNKP-206ENST00000595792 TECPR2O15040 1411 aa26.39■■□□□ 1.82
PNKP-206ENST00000595792 PLEKHH1Q9ULM0 1364 aa26.39■■□□□ 1.82
PNKP-206ENST00000595792 WAPLQ7Z5K2 1190 aa26.39■■□□□ 1.82
PNKP-206ENST00000595792 ZNF772Q68DY9 489 aaPredicted RBP26.35■■□□□ 1.81
PNKP-206ENST00000595792 YTHDC2Q9H6S0 1430 aaKnown RBP26.35■■□□□ 1.81
PNKP-206ENST00000595792 MYOM2P54296 1465 aa26.34■■□□□ 1.81
PNKP-206ENST00000595792 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
PNKP-206ENST00000595792 AFF2P51816 1311 aa26.34■■□□□ 1.81
PNKP-206ENST00000595792 SOS2Q07890 1332 aaPredicted RBP26.34■■□□□ 1.81
PNKP-206ENST00000595792 ABCC11Q96J66 1382 aa26.33■■□□□ 1.81
PNKP-206ENST00000595792 NUTM2FA1L443 756 aa26.33■■□□□ 1.81
PNKP-206ENST00000595792 HRCP23327 699 aa26.32■■□□□ 1.8
PNKP-206ENST00000595792 ESCO1Q5FWF5 840 aa26.31■■□□□ 1.8
PNKP-206ENST00000595792 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
PNKP-206ENST00000595792 CFAP70Q5T0N1 1121 aa26.3■■□□□ 1.8
PNKP-206ENST00000595792 C8orf37Q96NL8 207 aa26.3■■□□□ 1.8
PNKP-206ENST00000595792 ADAMTS2O95450 1211 aa26.28■■□□□ 1.8
PNKP-206ENST00000595792 C14orf93Q9H972 538 aaKnown RBP26.28■■□□□ 1.8
PNKP-206ENST00000595792 PXDNQ92626 1479 aa26.28■■□□□ 1.8
PNKP-206ENST00000595792 XPCQ01831 940 aaPredicted RBP26.27■■□□□ 1.8
PNKP-206ENST00000595792 COL22A1Q8NFW1 1626 aaPredicted RBP26.26■■□□□ 1.79
PNKP-206ENST00000595792 NPHP3Q7Z494 1330 aa26.23■■□□□ 1.79
PNKP-206ENST00000595792 FOXO3O43524 673 aa26.23■■□□□ 1.79
PNKP-206ENST00000595792 RXRBP28702 533 aa26.23■■□□□ 1.79
PNKP-206ENST00000595792 DHX57Q6P158 1386 aaKnown RBP26.21■■□□□ 1.79
PNKP-206ENST00000595792 RGPD8O14715 1765 aaPredicted RBP26.21■■□□□ 1.79
PNKP-206ENST00000595792 SAFB2Q14151 953 aaKnown RBP eCLIP26.21■■□□□ 1.79
PNKP-206ENST00000595792 ADGRB1O14514 1584 aa26.2■■□□□ 1.78
PNKP-206ENST00000595792 KIF1AQ12756 1690 aa26.19■■□□□ 1.78
PNKP-206ENST00000595792 NGLY1Q96IV0 654 aa26.19■■□□□ 1.78
PNKP-206ENST00000595792 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
PNKP-206ENST00000595792 CDK12Q9NYV4 1490 aaPredicted RBP26.17■■□□□ 1.78
PNKP-206ENST00000595792 RGS12O14924 1447 aa26.17■■□□□ 1.78
PNKP-206ENST00000595792 KDM2AQ9Y2K7 1162 aa26.17■■□□□ 1.78
PNKP-206ENST00000595792 SIRT1Q96EB6 747 aa26.16■■□□□ 1.78
PNKP-206ENST00000595792 QTRT2Q9H974 415 aaKnown RBP26.16■■□□□ 1.78
PNKP-206ENST00000595792 DLC1Q96QB1 1528 aa26.15■■□□□ 1.78
PNKP-206ENST00000595792 MARF1Q9Y4F3 1742 aaKnown RBP26.14■■□□□ 1.77
PNKP-206ENST00000595792 DCAF11Q8TEB1 546 aa26.13■■□□□ 1.77
PNKP-206ENST00000595792 USP32Q8NFA0 1604 aa26.13■■□□□ 1.77
PNKP-206ENST00000595792 RBM6P78332 1123 aaKnown RBP26.11■■□□□ 1.77
PNKP-206ENST00000595792 UPF1Q92900 1129 aaKnown RBP eCLIP26.11■■□□□ 1.77
PNKP-206ENST00000595792 USP21Q9UK80 565 aa26.11■■□□□ 1.77
PNKP-206ENST00000595792 TRAK1Q9UPV9 953 aa26.11■■□□□ 1.77
PNKP-206ENST00000595792 ADGRB2O60241 1585 aa26.11■■□□□ 1.77
PNKP-206ENST00000595792 POGKQ9P215 609 aa26.1■■□□□ 1.77
PNKP-206ENST00000595792 PHF8Q9UPP1 1060 aa26.08■■□□□ 1.77
PNKP-206ENST00000595792 SPATA31A3Q5VYP0 1347 aa26.08■■□□□ 1.77
PNKP-206ENST00000595792 KRT28Q7Z3Y7 464 aa26.07■■□□□ 1.76
PNKP-206ENST00000595792 FNBP4Q8N3X1 1017 aaPredicted RBP26.07■■□□□ 1.76
PNKP-206ENST00000595792 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
PNKP-206ENST00000595792 ATRNO75882 1429 aa26.05■■□□□ 1.76
PNKP-206ENST00000595792 MINK1Q8N4C8 1332 aaPredicted RBP26.04■■□□□ 1.76
PNKP-206ENST00000595792 TNS3Q68CZ2 1445 aa26.04■■□□□ 1.76
PNKP-206ENST00000595792 ARHGEF28Q8N1W1 1705 aaKnown RBP26.03■■□□□ 1.76
PNKP-206ENST00000595792 PLEKHG5O94827 1062 aa26.03■■□□□ 1.76
PNKP-206ENST00000595792 TRPC5Q9UL62 973 aaPredicted RBP26.03■■□□□ 1.76
PNKP-206ENST00000595792 BCL9LQ86UU0 1499 aa26.03■■□□□ 1.76
PNKP-206ENST00000595792 PMFBP1Q8TBY8 1022 aa26.02■■□□□ 1.76
PNKP-206ENST00000595792 ANKARQ7Z5J8 1434 aa26.02■■□□□ 1.76
PNKP-206ENST00000595792 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
PNKP-206ENST00000595792 PRR36Q9H6K5 1346 aa25.99■■□□□ 1.75
PNKP-206ENST00000595792 CABLES1Q8TDN4 633 aa25.99■■□□□ 1.75
PNKP-206ENST00000595792 TULP4Q9NRJ4 1543 aa25.98■■□□□ 1.75
PNKP-206ENST00000595792 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.97■■□□□ 1.75
PNKP-206ENST00000595792 TRPM3Q9HCF6 1732 aaPredicted RBP25.97■■□□□ 1.75
PNKP-206ENST00000595792 KIAA1210Q9ULL0 1709 aa25.97■■□□□ 1.75
PNKP-206ENST00000595792 LMOD2Q6P5Q4 547 aa25.96■■□□□ 1.75
PNKP-206ENST00000595792 SBNO1A3KN83 1393 aa25.95■■□□□ 1.75
PNKP-206ENST00000595792 SLIT2O94813 1529 aa25.95■■□□□ 1.74
PNKP-206ENST00000595792 PSME1Q06323 249 aa25.95■■□□□ 1.74
PNKP-206ENST00000595792 STAC3Q96MF2 364 aa25.95■■□□□ 1.74
PNKP-206ENST00000595792 PLCH1Q4KWH8 1693 aa25.93■■□□□ 1.74
PNKP-206ENST00000595792 WASLO00401 505 aaPredicted RBP25.93■■□□□ 1.74
PNKP-206ENST00000595792 GLI3P10071 1580 aa25.92■■□□□ 1.74
PNKP-206ENST00000595792 HAP1P54257 671 aaPredicted RBP25.92■■□□□ 1.74
PNKP-206ENST00000595792 ALS2Q96Q42 1657 aa25.91■■□□□ 1.74
PNKP-206ENST00000595792 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
PNKP-206ENST00000595792 ARHGEF10O15013 1369 aa25.9■■□□□ 1.74
PNKP-206ENST00000595792 GJD4Q96KN9 370 aaPredicted RBP25.89■■□□□ 1.74
PNKP-206ENST00000595792 SIN3AQ96ST3 1273 aa25.89■■□□□ 1.74
PNKP-206ENST00000595792 ATAD2Q6PL18 1390 aa25.89■■□□□ 1.74
PNKP-206ENST00000595792 ATP7BP35670 1465 aa25.89■■□□□ 1.73
PNKP-206ENST00000595792 RALGAPBQ86X10 1494 aa25.89■■□□□ 1.73
PNKP-206ENST00000595792 UNC5CLQ8IV45 518 aa25.88■■□□□ 1.73
PNKP-206ENST00000595792 ITSN1Q15811 1721 aa25.87■■□□□ 1.73
PNKP-206ENST00000595792 EP400Q96L91 3159 aa25.87■■□□□ 1.73
PNKP-206ENST00000595792 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
PNKP-206ENST00000595792 NBPF1Q3BBV0 1214 aa25.85■■□□□ 1.73
PNKP-206ENST00000595792 NWD2Q9ULI1 1742 aa25.85■■□□□ 1.73
PNKP-206ENST00000595792 CRYBG1Q9Y4K1 1723 aa25.85■■□□□ 1.73
PNKP-206ENST00000595792 TOPAZ1Q8N9V7 1692 aa25.83■■□□□ 1.73
PNKP-206ENST00000595792 NGDNQ8NEJ9 315 aaKnown RBP25.83■■□□□ 1.73
PNKP-206ENST00000595792 NUDT16Q96DE0 195 aaKnown RBP25.82■■□□□ 1.72
PNKP-206ENST00000595792 NRAPQ86VF7 1730 aa25.81■■□□□ 1.72
PNKP-206ENST00000595792 L3MBTL2Q969R5 705 aa25.81■■□□□ 1.72
PNKP-206ENST00000595792 BRWD3Q6RI45 1802 aa25.81■■□□□ 1.72
PNKP-206ENST00000595792 TRPM1Q7Z4N2 1603 aa25.8■■□□□ 1.72
PNKP-206ENST00000595792 FAM83GA6ND36 823 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms