RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 FMN2Q9NZ56 1722 aa19.84■□□□□ 0.77
SHKBP1-207ENST00000595631 MST1RQ04912 1400 aa19.84■□□□□ 0.77
SHKBP1-207ENST00000595631 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
SHKBP1-207ENST00000595631 NBPF8Q3BBV2 869 aa19.83■□□□□ 0.77
SHKBP1-207ENST00000595631 CADPS2Q86UW7 1296 aa19.83■□□□□ 0.77
SHKBP1-207ENST00000595631 SLAIN2Q9P270 581 aa19.83■□□□□ 0.77
SHKBP1-207ENST00000595631 HSPA1LP34931 641 aa19.82■□□□□ 0.76
SHKBP1-207ENST00000595631 CCER1Q8TC90 406 aaPredicted RBP19.82■□□□□ 0.76
SHKBP1-207ENST00000595631 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
SHKBP1-207ENST00000595631 PHLPP1O60346 1717 aa19.82■□□□□ 0.76
SHKBP1-207ENST00000595631 SIRT1Q96EB6 747 aa19.8■□□□□ 0.76
SHKBP1-207ENST00000595631 ADGRB2O60241 1585 aa19.78■□□□□ 0.76
SHKBP1-207ENST00000595631 CLSPNQ9HAW4 1339 aa19.78■□□□□ 0.76
SHKBP1-207ENST00000595631 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
SHKBP1-207ENST00000595631 POGKQ9P215 609 aa19.78■□□□□ 0.76
SHKBP1-207ENST00000595631 NHSL1Q5SYE7 1610 aa19.77■□□□□ 0.76
SHKBP1-207ENST00000595631 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
SHKBP1-207ENST00000595631 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
SHKBP1-207ENST00000595631 RALGAPBQ86X10 1494 aa19.75■□□□□ 0.75
SHKBP1-207ENST00000595631 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-207ENST00000595631 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-207ENST00000595631 COL16A1Q07092 1604 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-207ENST00000595631 NUTM2FA1L443 756 aa19.74■□□□□ 0.75
SHKBP1-207ENST00000595631 BRINP3Q76B58 766 aa19.74■□□□□ 0.75
SHKBP1-207ENST00000595631 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-207ENST00000595631 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-207ENST00000595631 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
SHKBP1-207ENST00000595631 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
SHKBP1-207ENST00000595631 DDX17Q92841 729 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-207ENST00000595631 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
SHKBP1-207ENST00000595631 ITSN1Q15811 1721 aa19.67■□□□□ 0.74
SHKBP1-207ENST00000595631 CENPJQ9HC77 1338 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-207ENST00000595631 TULP4Q9NRJ4 1543 aa19.66■□□□□ 0.74
SHKBP1-207ENST00000595631 ESCO1Q5FWF5 840 aa19.65■□□□□ 0.74
SHKBP1-207ENST00000595631 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
SHKBP1-207ENST00000595631 TOPAZ1Q8N9V7 1692 aa19.64■□□□□ 0.73
SHKBP1-207ENST00000595631 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
SHKBP1-207ENST00000595631 PRR36Q9H6K5 1346 aa19.63■□□□□ 0.73
SHKBP1-207ENST00000595631 WASLO00401 505 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-207ENST00000595631 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
SHKBP1-207ENST00000595631 ATP7BP35670 1465 aa19.61■□□□□ 0.73
SHKBP1-207ENST00000595631 ANKARQ7Z5J8 1434 aa19.61■□□□□ 0.73
SHKBP1-207ENST00000595631 MED1Q15648 1581 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-207ENST00000595631 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-207ENST00000595631 CDK19Q9BWU1 502 aa19.6■□□□□ 0.73
SHKBP1-207ENST00000595631 PXDNQ92626 1479 aa19.6■□□□□ 0.73
SHKBP1-207ENST00000595631 XPCQ01831 940 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-207ENST00000595631 FOXO3O43524 673 aa19.57■□□□□ 0.72
SHKBP1-207ENST00000595631 PHF8Q9UPP1 1060 aa19.57■□□□□ 0.72
SHKBP1-207ENST00000595631 PMFBP1Q8TBY8 1022 aa19.56■□□□□ 0.72
SHKBP1-207ENST00000595631 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-207ENST00000595631 JCADQ9P266 1359 aa19.56■□□□□ 0.72
SHKBP1-207ENST00000595631 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-207ENST00000595631 NUDT16Q96DE0 195 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-207ENST00000595631 NPHP3Q7Z494 1330 aa19.54■□□□□ 0.72
SHKBP1-207ENST00000595631 CABP2Q9NPB3 220 aa19.54■□□□□ 0.72
SHKBP1-207ENST00000595631 SRPK2P78362 688 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-207ENST00000595631 USP47Q96K76 1375 aa19.52■□□□□ 0.72
SHKBP1-207ENST00000595631 LRP6O75581 1613 aa19.51■□□□□ 0.71
SHKBP1-207ENST00000595631 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-207ENST00000595631 PNPLA6Q8IY17 1366 aa19.51■□□□□ 0.71
SHKBP1-207ENST00000595631 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
SHKBP1-207ENST00000595631 SBNO2Q9Y2G9 1366 aa19.5■□□□□ 0.71
SHKBP1-207ENST00000595631 LRRC59Q96AG4 307 aaKnown RBP19.5■□□□□ 0.71
SHKBP1-207ENST00000595631 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
SHKBP1-207ENST00000595631 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
SHKBP1-207ENST00000595631 KRT28Q7Z3Y7 464 aa19.49■□□□□ 0.71
SHKBP1-207ENST00000595631 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
SHKBP1-207ENST00000595631 PPIP5K1Q6PFW1 1433 aa19.49■□□□□ 0.71
SHKBP1-207ENST00000595631 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
SHKBP1-207ENST00000595631 MARF1Q9Y4F3 1742 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-207ENST00000595631 PSME1Q06323 249 aa19.46■□□□□ 0.71
SHKBP1-207ENST00000595631 NGDNQ8NEJ9 315 aaKnown RBP19.46■□□□□ 0.71
SHKBP1-207ENST00000595631 TESK2Q96S53 571 aa19.46■□□□□ 0.71
SHKBP1-207ENST00000595631 CCDC61Q9Y6R9 512 aa19.46■□□□□ 0.71
SHKBP1-207ENST00000595631 DISP3Q9P2K9 1392 aa19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 TNS3Q68CZ2 1445 aa19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 NUTM2BA6NNL0 878 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 NUTM2EB1AL46 878 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 NUTM2AQ8IVF1 878 aaPredicted RBP19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 ACEP12821 1306 aa19.45■□□□□ 0.7
SHKBP1-207ENST00000595631 SPATA31A6Q5VVP1 1343 aa19.44■□□□□ 0.7
SHKBP1-207ENST00000595631 SPATA31A3Q5VYP0 1347 aa19.44■□□□□ 0.7
SHKBP1-207ENST00000595631 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
SHKBP1-207ENST00000595631 CRYBG1Q9Y4K1 1723 aa19.43■□□□□ 0.7
SHKBP1-207ENST00000595631 SBNO1A3KN83 1393 aa19.43■□□□□ 0.7
SHKBP1-207ENST00000595631 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
SHKBP1-207ENST00000595631 PLEKHG3A1L390 1219 aa19.42■□□□□ 0.7
SHKBP1-207ENST00000595631 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
SHKBP1-207ENST00000595631 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
SHKBP1-207ENST00000595631 LMOD2Q6P5Q4 547 aa19.4■□□□□ 0.7
SHKBP1-207ENST00000595631 ATAD2Q6PL18 1390 aa19.4■□□□□ 0.7
SHKBP1-207ENST00000595631 NRKQ7Z2Y5 1582 aa19.4■□□□□ 0.7
SHKBP1-207ENST00000595631 PAK3O75914 559 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-207ENST00000595631 MYOM1P52179 1685 aa19.38■□□□□ 0.69
SHKBP1-207ENST00000595631 PHRF1Q9P1Y6 1649 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-207ENST00000595631 MEX3CQ5U5Q3 659 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-207ENST00000595631 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-207ENST00000595631 ADAMTS2O95450 1211 aa19.36■□□□□ 0.69
SHKBP1-207ENST00000595631 HSPA5P11021 654 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms