RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 COL16A1Q07092 1604 aaPredicted RBP19.68■□□□□ 0.74
TMEM38A-202ENST00000595452 C1orf167Q5SNV9 1468 aa19.67■□□□□ 0.74
TMEM38A-202ENST00000595452 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
TMEM38A-202ENST00000595452 WAPLQ7Z5K2 1190 aa19.66■□□□□ 0.74
TMEM38A-202ENST00000595452 JCADQ9P266 1359 aa19.66■□□□□ 0.74
TMEM38A-202ENST00000595452 NEUROD1Q13562 356 aa19.65■□□□□ 0.74
TMEM38A-202ENST00000595452 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
TMEM38A-202ENST00000595452 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
TMEM38A-202ENST00000595452 ARHGEF28Q8N1W1 1705 aaKnown RBP19.64■□□□□ 0.73
TMEM38A-202ENST00000595452 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
TMEM38A-202ENST00000595452 EIF3AQ14152 1382 aaKnown RBP19.63■□□□□ 0.73
TMEM38A-202ENST00000595452 TRAK1Q9UPV9 953 aa19.63■□□□□ 0.73
TMEM38A-202ENST00000595452 KIF1AQ12756 1690 aa19.62■□□□□ 0.73
TMEM38A-202ENST00000595452 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
TMEM38A-202ENST00000595452 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
TMEM38A-202ENST00000595452 TONSLQ96HA7 1378 aa19.61■□□□□ 0.73
TMEM38A-202ENST00000595452 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
TMEM38A-202ENST00000595452 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
TMEM38A-202ENST00000595452 SAFB2Q14151 953 aaKnown RBP eCLIP19.59■□□□□ 0.73
TMEM38A-202ENST00000595452 SPATA31A6Q5VVP1 1343 aa19.58■□□□□ 0.73
TMEM38A-202ENST00000595452 ESCO1Q5FWF5 840 aa19.58■□□□□ 0.72
TMEM38A-202ENST00000595452 LRRC59Q96AG4 307 aaKnown RBP19.58■□□□□ 0.72
TMEM38A-202ENST00000595452 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.72
TMEM38A-202ENST00000595452 NPHP3Q7Z494 1330 aa19.57■□□□□ 0.72
TMEM38A-202ENST00000595452 ORAI2Q96SN7 254 aa19.56■□□□□ 0.72
TMEM38A-202ENST00000595452 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
TMEM38A-202ENST00000595452 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
TMEM38A-202ENST00000595452 NUTM2FA1L443 756 aa19.54■□□□□ 0.72
TMEM38A-202ENST00000595452 RGPD8O14715 1765 aaPredicted RBP19.54■□□□□ 0.72
TMEM38A-202ENST00000595452 PCGF6Q9BYE7 350 aa19.53■□□□□ 0.72
TMEM38A-202ENST00000595452 MINK1Q8N4C8 1332 aaPredicted RBP19.52■□□□□ 0.72
TMEM38A-202ENST00000595452 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
TMEM38A-202ENST00000595452 MEX3CQ5U5Q3 659 aaKnown RBP19.52■□□□□ 0.72
TMEM38A-202ENST00000595452 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.72
TMEM38A-202ENST00000595452 QRICH2Q9H0J4 1663 aa19.5■□□□□ 0.71
TMEM38A-202ENST00000595452 SOS2Q07890 1332 aaPredicted RBP19.5■□□□□ 0.71
TMEM38A-202ENST00000595452 HIRIP3Q9BW71 556 aaPredicted RBP19.49■□□□□ 0.71
TMEM38A-202ENST00000595452 CLSPNQ9HAW4 1339 aa19.49■□□□□ 0.71
TMEM38A-202ENST00000595452 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
TMEM38A-202ENST00000595452 NBPF1Q3BBV0 1214 aa19.48■□□□□ 0.71
TMEM38A-202ENST00000595452 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
TMEM38A-202ENST00000595452 CENPJQ9HC77 1338 aaPredicted RBP19.48■□□□□ 0.71
TMEM38A-202ENST00000595452 USP32Q8NFA0 1604 aa19.47■□□□□ 0.71
TMEM38A-202ENST00000595452 PNPLA6Q8IY17 1366 aa19.47■□□□□ 0.71
TMEM38A-202ENST00000595452 FOXO3O43524 673 aa19.47■□□□□ 0.71
TMEM38A-202ENST00000595452 PHF8Q9UPP1 1060 aa19.47■□□□□ 0.71
TMEM38A-202ENST00000595452 PXDNQ92626 1479 aa19.47■□□□□ 0.71
TMEM38A-202ENST00000595452 PSME1Q06323 249 aa19.46■□□□□ 0.71
TMEM38A-202ENST00000595452 COL22A1Q8NFW1 1626 aaPredicted RBP19.45■□□□□ 0.7
TMEM38A-202ENST00000595452 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
TMEM38A-202ENST00000595452 NUTM2BA6NNL0 878 aaPredicted RBP19.44■□□□□ 0.7
TMEM38A-202ENST00000595452 NUTM2EB1AL46 878 aaPredicted RBP19.44■□□□□ 0.7
TMEM38A-202ENST00000595452 NUTM2AQ8IVF1 878 aaPredicted RBP19.44■□□□□ 0.7
TMEM38A-202ENST00000595452 LRP6O75581 1613 aa19.43■□□□□ 0.7
TMEM38A-202ENST00000595452 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
TMEM38A-202ENST00000595452 KRT28Q7Z3Y7 464 aa19.41■□□□□ 0.7
TMEM38A-202ENST00000595452 ATP7BP35670 1465 aa19.41■□□□□ 0.7
TMEM38A-202ENST00000595452 TOPAZ1Q8N9V7 1692 aa19.4■□□□□ 0.7
TMEM38A-202ENST00000595452 XPCQ01831 940 aaPredicted RBP19.4■□□□□ 0.7
TMEM38A-202ENST00000595452 CARD11Q9BXL7 1154 aa19.4■□□□□ 0.7
TMEM38A-202ENST00000595452 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 CDK19Q9BWU1 502 aa19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 TIMELESSQ9UNS1 1208 aa19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 TNS3Q68CZ2 1445 aa19.39■□□□□ 0.69
TMEM38A-202ENST00000595452 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
TMEM38A-202ENST00000595452 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
TMEM38A-202ENST00000595452 SPATA31A3Q5VYP0 1347 aa19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 EVC2Q86UK5 1308 aa19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 NBPF8Q3BBV2 869 aa19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 CCER1Q8TC90 406 aaPredicted RBP19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 NUDT16Q96DE0 195 aaKnown RBP19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 MARF1Q9Y4F3 1742 aaKnown RBP19.37■□□□□ 0.69
TMEM38A-202ENST00000595452 PRR36Q9H6K5 1346 aa19.36■□□□□ 0.69
TMEM38A-202ENST00000595452 HAP1P54257 671 aaPredicted RBP19.36■□□□□ 0.69
TMEM38A-202ENST00000595452 CCDC61Q9Y6R9 512 aa19.36■□□□□ 0.69
TMEM38A-202ENST00000595452 ILDR2Q71H61 639 aa19.35■□□□□ 0.69
TMEM38A-202ENST00000595452 LMOD2Q6P5Q4 547 aa19.34■□□□□ 0.69
TMEM38A-202ENST00000595452 TRPM3Q9HCF6 1732 aaPredicted RBP19.34■□□□□ 0.69
TMEM38A-202ENST00000595452 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.69
TMEM38A-202ENST00000595452 ADAMTS2O95450 1211 aa19.33■□□□□ 0.68
TMEM38A-202ENST00000595452 C8orf37Q96NL8 207 aa19.33■□□□□ 0.68
TMEM38A-202ENST00000595452 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
TMEM38A-202ENST00000595452 ALS2Q96Q42 1657 aa19.31■□□□□ 0.68
TMEM38A-202ENST00000595452 NGLY1Q96IV0 654 aa19.31■□□□□ 0.68
TMEM38A-202ENST00000595452 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
TMEM38A-202ENST00000595452 AFF2P51816 1311 aa19.3■□□□□ 0.68
TMEM38A-202ENST00000595452 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
TMEM38A-202ENST00000595452 RGS17Q9UGC6 210 aaPredicted RBP19.3■□□□□ 0.68
TMEM38A-202ENST00000595452 ABCA3Q99758 1704 aa19.3■□□□□ 0.68
TMEM38A-202ENST00000595452 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
TMEM38A-202ENST00000595452 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
TMEM38A-202ENST00000595452 CABP2Q9NPB3 220 aa19.28■□□□□ 0.68
TMEM38A-202ENST00000595452 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
TMEM38A-202ENST00000595452 SOCS7O14512 581 aa19.27■□□□□ 0.68
TMEM38A-202ENST00000595452 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
TMEM38A-202ENST00000595452 ACEP12821 1306 aa19.26■□□□□ 0.67
TMEM38A-202ENST00000595452 POTEAQ6S8J7 498 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms