RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 NAIPQ13075 1403 aa14.84□□□□□ -0.03
NOTCH3-202ENST00000595045 RRBP1Q9P2E9 1410 aaKnown RBP14.83□□□□□ -0.03
NOTCH3-202ENST00000595045 MARF1Q9Y4F3 1742 aaKnown RBP14.83□□□□□ -0.03
NOTCH3-202ENST00000595045 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
NOTCH3-202ENST00000595045 GJD4Q96KN9 370 aaPredicted RBP14.82□□□□□ -0.04
NOTCH3-202ENST00000595045 PRAG1Q86YV5 1406 aa14.8□□□□□ -0.04
NOTCH3-202ENST00000595045 PXDNQ92626 1479 aa14.8□□□□□ -0.04
NOTCH3-202ENST00000595045 KIF1BO60333 1816 aa14.79□□□□□ -0.04
NOTCH3-202ENST00000595045 BLMP54132 1417 aaPredicted RBP14.79□□□□□ -0.04
NOTCH3-202ENST00000595045 NPHP3Q7Z494 1330 aa14.79□□□□□ -0.04
NOTCH3-202ENST00000595045 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
NOTCH3-202ENST00000595045 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
NOTCH3-202ENST00000595045 GLI3P10071 1580 aa14.77□□□□□ -0.04
NOTCH3-202ENST00000595045 RALGAPBQ86X10 1494 aa14.77□□□□□ -0.04
NOTCH3-202ENST00000595045 HFM1A2PYH4 1435 aa14.77□□□□□ -0.04
NOTCH3-202ENST00000595045 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.05
NOTCH3-202ENST00000595045 ESCO1Q5FWF5 840 aa14.77□□□□□ -0.05
NOTCH3-202ENST00000595045 DEFB132Q7Z7B7 95 aa14.77□□□□□ -0.05
NOTCH3-202ENST00000595045 VGFO15240 615 aaPredicted RBP14.76□□□□□ -0.05
NOTCH3-202ENST00000595045 LRP5O75197 1615 aa14.76□□□□□ -0.05
NOTCH3-202ENST00000595045 RPGRIP1LQ68CZ1 1315 aa14.75□□□□□ -0.05
NOTCH3-202ENST00000595045 FOXO3O43524 673 aa14.75□□□□□ -0.05
NOTCH3-202ENST00000595045 UNC5CLQ8IV45 518 aa14.75□□□□□ -0.05
NOTCH3-202ENST00000595045 CDC42BPGQ6DT37 1551 aa14.75□□□□□ -0.05
NOTCH3-202ENST00000595045 SLIT2O94813 1529 aa14.75□□□□□ -0.05
NOTCH3-202ENST00000595045 ADGRF5Q8IZF2 1346 aa14.73□□□□□ -0.05
NOTCH3-202ENST00000595045 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
NOTCH3-202ENST00000595045 SLC4A1APQ9BWU0 796 aaKnown RBP14.71□□□□□ -0.05
NOTCH3-202ENST00000595045 LRPPRCP42704 1394 aaKnown RBP14.71□□□□□ -0.06
NOTCH3-202ENST00000595045 NUTM2FA1L443 756 aa14.7□□□□□ -0.06
NOTCH3-202ENST00000595045 SEPT12Q8IYM1 358 aa14.7□□□□□ -0.06
NOTCH3-202ENST00000595045 PPLO60437 1756 aa14.7□□□□□ -0.06
NOTCH3-202ENST00000595045 USP32Q8NFA0 1604 aa14.7□□□□□ -0.06
NOTCH3-202ENST00000595045 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
NOTCH3-202ENST00000595045 SPATA31E1Q6ZUB1 1445 aa14.68□□□□□ -0.06
NOTCH3-202ENST00000595045 WAPLQ7Z5K2 1190 aa14.68□□□□□ -0.06
NOTCH3-202ENST00000595045 PSDA5PKW4 1024 aaPredicted RBP14.67□□□□□ -0.06
NOTCH3-202ENST00000595045 VPS72Q15906 364 aa14.67□□□□□ -0.06
NOTCH3-202ENST00000595045 PLEKHH1Q9ULM0 1364 aa14.67□□□□□ -0.06
NOTCH3-202ENST00000595045 ONECUT3O60422 494 aaPredicted RBP14.66□□□□□ -0.06
NOTCH3-202ENST00000595045 HRCP23327 699 aa14.66□□□□□ -0.06
NOTCH3-202ENST00000595045 TECPR2O15040 1411 aa14.66□□□□□ -0.06
NOTCH3-202ENST00000595045 PLCH1Q4KWH8 1693 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 TMEM132EQ6IEE7 984 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 KRT27Q7Z3Y8 459 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 NWD2Q9ULI1 1742 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 KIF1AQ12756 1690 aa14.65□□□□□ -0.06
NOTCH3-202ENST00000595045 FMN2Q9NZ56 1722 aa14.64□□□□□ -0.07
NOTCH3-202ENST00000595045 ABCC11Q96J66 1382 aa14.64□□□□□ -0.07
NOTCH3-202ENST00000595045 KRT28Q7Z3Y7 464 aa14.64□□□□□ -0.07
NOTCH3-202ENST00000595045 STK26Q9P289 416 aa14.64□□□□□ -0.07
NOTCH3-202ENST00000595045 BAG6P46379 1132 aa14.63□□□□□ -0.07
NOTCH3-202ENST00000595045 RGL3Q3MIN7 710 aa14.63□□□□□ -0.07
NOTCH3-202ENST00000595045 CABLES1Q8TDN4 633 aa14.63□□□□□ -0.07
NOTCH3-202ENST00000595045 MPHOSPH9Q99550 1183 aa14.63□□□□□ -0.07
NOTCH3-202ENST00000595045 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
NOTCH3-202ENST00000595045 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
NOTCH3-202ENST00000595045 TNS3Q68CZ2 1445 aa14.62□□□□□ -0.07
NOTCH3-202ENST00000595045 ABCA3Q99758 1704 aa14.61□□□□□ -0.07
NOTCH3-202ENST00000595045 RGPD8O14715 1765 aaPredicted RBP14.61□□□□□ -0.07
NOTCH3-202ENST00000595045 KNDC1Q76NI1 1749 aa14.61□□□□□ -0.07
NOTCH3-202ENST00000595045 PIK3C2GO75747 1445 aa14.6□□□□□ -0.07
NOTCH3-202ENST00000595045 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
NOTCH3-202ENST00000595045 ANKRD30BQ9BXX2 1392 aa14.6□□□□□ -0.07
NOTCH3-202ENST00000595045 A0A0G2JS52 829 aa14.59□□□□□ -0.07
NOTCH3-202ENST00000595045 MYT1Q01538 1121 aa14.59□□□□□ -0.07
NOTCH3-202ENST00000595045 SIRT1Q96EB6 747 aa14.59□□□□□ -0.07
NOTCH3-202ENST00000595045 C14orf93Q9H972 538 aaKnown RBP14.59□□□□□ -0.07
NOTCH3-202ENST00000595045 FAM83GA6ND36 823 aa14.58□□□□□ -0.08
NOTCH3-202ENST00000595045 EN1Q05925 392 aaPredicted RBP14.58□□□□□ -0.08
NOTCH3-202ENST00000595045 IFT172Q9UG01 1749 aa14.58□□□□□ -0.08
NOTCH3-202ENST00000595045 PSME1Q06323 249 aa14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 FAM98CQ17RN3 349 aaKnown RBP14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 RGPD1P0DJD0 1748 aa14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 NRAPQ86VF7 1730 aa14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 SBNO1A3KN83 1393 aa14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 YTHDC2Q9H6S0 1430 aaKnown RBP14.57□□□□□ -0.08
NOTCH3-202ENST00000595045 R3HDM1Q15032 1099 aaKnown RBP14.56□□□□□ -0.08
NOTCH3-202ENST00000595045 LMOD2Q6P5Q4 547 aa14.56□□□□□ -0.08
NOTCH3-202ENST00000595045 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
NOTCH3-202ENST00000595045 ARHGEF10O15013 1369 aa14.55□□□□□ -0.08
NOTCH3-202ENST00000595045 NRXN1Q9ULB1 1477 aa14.55□□□□□ -0.08
NOTCH3-202ENST00000595045 FAM182BQ5T319 152 aa14.54□□□□□ -0.08
NOTCH3-202ENST00000595045 TNS1Q9HBL0 1735 aaKnown RBP14.53□□□□□ -0.08
NOTCH3-202ENST00000595045 DISP2A7MBM2 1401 aa14.53□□□□□ -0.08
NOTCH3-202ENST00000595045 BTG4Q9NY30 223 aa14.53□□□□□ -0.08
NOTCH3-202ENST00000595045 COL14A1Q05707 1796 aaKnown RBP14.5□□□□□ -0.09
NOTCH3-202ENST00000595045 THSD7AQ9UPZ6 1657 aa14.5□□□□□ -0.09
NOTCH3-202ENST00000595045 EZH2Q15910 746 aaKnown RBP14.5□□□□□ -0.09
NOTCH3-202ENST00000595045 PRAM1Q96QH2 718 aa14.5□□□□□ -0.09
NOTCH3-202ENST00000595045 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
NOTCH3-202ENST00000595045 SPATA31A5Q5VU36 1347 aa14.49□□□□□ -0.09
NOTCH3-202ENST00000595045 SPATA31A7Q8IWB4 1347 aa14.49□□□□□ -0.09
NOTCH3-202ENST00000595045 PMFBP1Q8TBY8 1022 aa14.49□□□□□ -0.09
NOTCH3-202ENST00000595045 YY1P25490 414 aa14.48□□□□□ -0.09
NOTCH3-202ENST00000595045 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
NOTCH3-202ENST00000595045 CAMKK2Q96RR4 588 aa14.48□□□□□ -0.09
NOTCH3-202ENST00000595045 ALS2Q96Q42 1657 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms