RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ADGRL1O94910 1474 aa17.05■□□□□ 0.32
VRK3-209ENST00000594948 NLRP1Q9C000 1473 aa17.04■□□□□ 0.32
VRK3-209ENST00000594948 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
VRK3-209ENST00000594948 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
VRK3-209ENST00000594948 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 WDR63Q8IWG1 891 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
VRK3-209ENST00000594948 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 KIF3BO15066 747 aa17.03■□□□□ 0.32
VRK3-209ENST00000594948 BECN1Q14457 450 aa17.02■□□□□ 0.31
VRK3-209ENST00000594948 PUS7Q96PZ0 661 aaKnown RBP17.02■□□□□ 0.31
VRK3-209ENST00000594948 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.31
VRK3-209ENST00000594948 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
VRK3-209ENST00000594948 NSD2O96028 1365 aa17■□□□□ 0.31
VRK3-209ENST00000594948 NOS1P29475 1434 aa17■□□□□ 0.31
VRK3-209ENST00000594948 CFAP74Q9C0B2 1584 aa17■□□□□ 0.31
VRK3-209ENST00000594948 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
VRK3-209ENST00000594948 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
VRK3-209ENST00000594948 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
VRK3-209ENST00000594948 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
VRK3-209ENST00000594948 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
VRK3-209ENST00000594948 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
VRK3-209ENST00000594948 ANKRD26Q9UPS8 1709 aa16.97■□□□□ 0.31
VRK3-209ENST00000594948 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
VRK3-209ENST00000594948 HECW2Q9P2P5 1572 aa16.97■□□□□ 0.31
VRK3-209ENST00000594948 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
VRK3-209ENST00000594948 GLI2P10070 1586 aa16.96■□□□□ 0.31
VRK3-209ENST00000594948 CFAP53Q96M91 514 aa16.96■□□□□ 0.3
VRK3-209ENST00000594948 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
VRK3-209ENST00000594948 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
VRK3-209ENST00000594948 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
VRK3-209ENST00000594948 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
VRK3-209ENST00000594948 CAMSAP1Q5T5Y3 1602 aa16.94■□□□□ 0.3
VRK3-209ENST00000594948 RWDD1Q9H446 243 aaPredicted RBP16.93■□□□□ 0.3
VRK3-209ENST00000594948 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
VRK3-209ENST00000594948 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
VRK3-209ENST00000594948 ANKRD36BQ8N2N9 1353 aa16.92■□□□□ 0.3
VRK3-209ENST00000594948 SEC24BO95487 1268 aa16.91■□□□□ 0.3
VRK3-209ENST00000594948 TBC1D32Q96NH3 1257 aa16.91■□□□□ 0.3
VRK3-209ENST00000594948 TULP4Q9NRJ4 1543 aa16.91■□□□□ 0.3
VRK3-209ENST00000594948 NPATQ14207 1427 aa16.91■□□□□ 0.3
VRK3-209ENST00000594948 FRMPD1Q5SYB0 1578 aa16.9■□□□□ 0.3
VRK3-209ENST00000594948 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
VRK3-209ENST00000594948 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
VRK3-209ENST00000594948 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
VRK3-209ENST00000594948 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
VRK3-209ENST00000594948 ANTXR1Q9H6X2 564 aa16.89■□□□□ 0.29
VRK3-209ENST00000594948 CFAP65Q6ZU64 1925 aaKnown RBP16.89■□□□□ 0.29
VRK3-209ENST00000594948 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
VRK3-209ENST00000594948 ABCC3O15438 1527 aa16.88■□□□□ 0.29
VRK3-209ENST00000594948 RLBP1P12271 317 aa16.88■□□□□ 0.29
VRK3-209ENST00000594948 MTHFSP49914 203 aa16.88■□□□□ 0.29
VRK3-209ENST00000594948 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
VRK3-209ENST00000594948 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
VRK3-209ENST00000594948 FAM43AQ8N2R8 423 aa16.87■□□□□ 0.29
VRK3-209ENST00000594948 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
VRK3-209ENST00000594948 CLTCQ00610 1675 aaKnown RBP16.87■□□□□ 0.29
VRK3-209ENST00000594948 EVC2Q86UK5 1308 aa16.87■□□□□ 0.29
VRK3-209ENST00000594948 ZKSCAN2Q63HK3 967 aa16.86■□□□□ 0.29
VRK3-209ENST00000594948 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
VRK3-209ENST00000594948 SIGLEC1Q9BZZ2 1709 aa16.86■□□□□ 0.29
VRK3-209ENST00000594948 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
VRK3-209ENST00000594948 MED14O60244 1454 aa16.86■□□□□ 0.29
VRK3-209ENST00000594948 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
VRK3-209ENST00000594948 RRP7AQ9Y3A4 280 aaKnown RBP16.86■□□□□ 0.29
VRK3-209ENST00000594948 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
VRK3-209ENST00000594948 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
VRK3-209ENST00000594948 COL3A1P02461 1466 aaPredicted RBP16.85■□□□□ 0.29
VRK3-209ENST00000594948 NEUROD2Q15784 382 aa16.84■□□□□ 0.29
VRK3-209ENST00000594948 IL16Q14005 1332 aa16.84■□□□□ 0.29
VRK3-209ENST00000594948 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
VRK3-209ENST00000594948 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
VRK3-209ENST00000594948 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
VRK3-209ENST00000594948 TBC1D2Q9BYX2 928 aa16.82■□□□□ 0.28
VRK3-209ENST00000594948 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
VRK3-209ENST00000594948 KIF20BQ96Q89 1820 aa16.81■□□□□ 0.28
VRK3-209ENST00000594948 CDC42BPGQ6DT37 1551 aa16.8■□□□□ 0.28
VRK3-209ENST00000594948 TNNT2P45379 298 aaPredicted RBP16.8■□□□□ 0.28
VRK3-209ENST00000594948 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
VRK3-209ENST00000594948 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
VRK3-209ENST00000594948 FTSJ3Q8IY81 847 aaKnown RBP16.8■□□□□ 0.28
VRK3-209ENST00000594948 POGKQ9P215 609 aa16.8■□□□□ 0.28
VRK3-209ENST00000594948 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
VRK3-209ENST00000594948 CD109Q6YHK3 1445 aa16.79■□□□□ 0.28
VRK3-209ENST00000594948 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
VRK3-209ENST00000594948 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
VRK3-209ENST00000594948 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
VRK3-209ENST00000594948 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
VRK3-209ENST00000594948 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
VRK3-209ENST00000594948 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
VRK3-209ENST00000594948 TMEM132EQ6IEE7 984 aa16.77■□□□□ 0.27
VRK3-209ENST00000594948 SMC5Q8IY18 1101 aa16.77■□□□□ 0.27
VRK3-209ENST00000594948 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
VRK3-209ENST00000594948 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
VRK3-209ENST00000594948 MYO5BQ9ULV0 1848 aa16.76■□□□□ 0.27
VRK3-209ENST00000594948 PNNQ9H307 717 aaKnown RBP16.75■□□□□ 0.27
VRK3-209ENST00000594948 CHMP5Q9NZZ3 219 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms