RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 TONSLQ96HA7 1378 aa23.17■■□□□ 1.3
USHBP1-204ENST00000594190 CDC42BPGQ6DT37 1551 aa23.16■■□□□ 1.3
USHBP1-204ENST00000594190 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
USHBP1-204ENST00000594190 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
USHBP1-204ENST00000594190 DDX17Q92841 729 aaKnown RBP23.11■■□□□ 1.29
USHBP1-204ENST00000594190 UPF1Q92900 1129 aaKnown RBP eCLIP23.11■■□□□ 1.29
USHBP1-204ENST00000594190 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
USHBP1-204ENST00000594190 LRPPRCP42704 1394 aaKnown RBP23.1■■□□□ 1.29
USHBP1-204ENST00000594190 MYOM2P54296 1465 aa23.1■■□□□ 1.29
USHBP1-204ENST00000594190 PNPLA6Q8IY17 1366 aa23.09■■□□□ 1.29
USHBP1-204ENST00000594190 ABCC11Q96J66 1382 aa23.09■■□□□ 1.29
USHBP1-204ENST00000594190 RXRBP28702 533 aa23.07■■□□□ 1.28
USHBP1-204ENST00000594190 ORAI2Q96SN7 254 aa23.07■■□□□ 1.28
USHBP1-204ENST00000594190 FMN2Q9NZ56 1722 aa23.07■■□□□ 1.28
USHBP1-204ENST00000594190 COL22A1Q8NFW1 1626 aaPredicted RBP23.07■■□□□ 1.28
USHBP1-204ENST00000594190 SOS2Q07890 1332 aaPredicted RBP23.07■■□□□ 1.28
USHBP1-204ENST00000594190 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
USHBP1-204ENST00000594190 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
USHBP1-204ENST00000594190 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
USHBP1-204ENST00000594190 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
USHBP1-204ENST00000594190 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
USHBP1-204ENST00000594190 YTHDC2Q9H6S0 1430 aaKnown RBP23.04■■□□□ 1.28
USHBP1-204ENST00000594190 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
USHBP1-204ENST00000594190 C14orf93Q9H972 538 aaKnown RBP23.02■■□□□ 1.28
USHBP1-204ENST00000594190 PXDNQ92626 1479 aa23.02■■□□□ 1.28
USHBP1-204ENST00000594190 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
USHBP1-204ENST00000594190 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
USHBP1-204ENST00000594190 SIRT1Q96EB6 747 aa23■■□□□ 1.27
USHBP1-204ENST00000594190 ADGRB1O14514 1584 aa22.99■■□□□ 1.27
USHBP1-204ENST00000594190 CDK12Q9NYV4 1490 aaPredicted RBP22.98■■□□□ 1.27
USHBP1-204ENST00000594190 MARF1Q9Y4F3 1742 aaKnown RBP22.97■■□□□ 1.27
USHBP1-204ENST00000594190 STK26Q9P289 416 aa22.97■■□□□ 1.27
USHBP1-204ENST00000594190 AFF2P51816 1311 aa22.97■■□□□ 1.27
USHBP1-204ENST00000594190 DLC1Q96QB1 1528 aa22.96■■□□□ 1.27
USHBP1-204ENST00000594190 KIF1AQ12756 1690 aa22.96■■□□□ 1.27
USHBP1-204ENST00000594190 CFAP70Q5T0N1 1121 aa22.95■■□□□ 1.26
USHBP1-204ENST00000594190 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
USHBP1-204ENST00000594190 ADGRB2O60241 1585 aa22.93■■□□□ 1.26
USHBP1-204ENST00000594190 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
USHBP1-204ENST00000594190 STAC3Q96MF2 364 aa22.91■■□□□ 1.26
USHBP1-204ENST00000594190 NPHP3Q7Z494 1330 aa22.9■■□□□ 1.26
USHBP1-204ENST00000594190 ESCO1Q5FWF5 840 aa22.9■■□□□ 1.26
USHBP1-204ENST00000594190 C8orf37Q96NL8 207 aa22.9■■□□□ 1.26
USHBP1-204ENST00000594190 QTRT2Q9H974 415 aaKnown RBP22.89■■□□□ 1.25
USHBP1-204ENST00000594190 RBM6P78332 1123 aaKnown RBP22.88■■□□□ 1.25
USHBP1-204ENST00000594190 FOXO3O43524 673 aa22.86■■□□□ 1.25
USHBP1-204ENST00000594190 RGS12O14924 1447 aa22.84■■□□□ 1.25
USHBP1-204ENST00000594190 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
USHBP1-204ENST00000594190 FNBP4Q8N3X1 1017 aaPredicted RBP22.84■■□□□ 1.25
USHBP1-204ENST00000594190 ARHGEF28Q8N1W1 1705 aaKnown RBP22.84■■□□□ 1.25
USHBP1-204ENST00000594190 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.83■■□□□ 1.25
USHBP1-204ENST00000594190 NGLY1Q96IV0 654 aa22.83■■□□□ 1.25
USHBP1-204ENST00000594190 ABCA3Q99758 1704 aa22.82■■□□□ 1.24
USHBP1-204ENST00000594190 ZNF316A6NFI3 1004 aaPredicted RBP22.82■■□□□ 1.24
USHBP1-204ENST00000594190 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
USHBP1-204ENST00000594190 PRAM1Q96QH2 718 aa22.82■■□□□ 1.24
USHBP1-204ENST00000594190 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
USHBP1-204ENST00000594190 SPATA31A3Q5VYP0 1347 aa22.81■■□□□ 1.24
USHBP1-204ENST00000594190 TRPM3Q9HCF6 1732 aaPredicted RBP22.8■■□□□ 1.24
USHBP1-204ENST00000594190 KIAA1210Q9ULL0 1709 aa22.8■■□□□ 1.24
USHBP1-204ENST00000594190 ATRNO75882 1429 aa22.8■■□□□ 1.24
USHBP1-204ENST00000594190 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
USHBP1-204ENST00000594190 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
USHBP1-204ENST00000594190 DCAF11Q8TEB1 546 aa22.79■■□□□ 1.24
USHBP1-204ENST00000594190 EP400Q96L91 3159 aa22.78■■□□□ 1.24
USHBP1-204ENST00000594190 ALS2Q96Q42 1657 aa22.75■■□□□ 1.23
USHBP1-204ENST00000594190 PHF8Q9UPP1 1060 aa22.75■■□□□ 1.23
USHBP1-204ENST00000594190 TNS3Q68CZ2 1445 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 SLIT2O94813 1529 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 SAFB2Q14151 953 aaKnown RBP eCLIP22.74■■□□□ 1.23
USHBP1-204ENST00000594190 KRT28Q7Z3Y7 464 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 USP21Q9UK80 565 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 KDM2AQ9Y2K7 1162 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
USHBP1-204ENST00000594190 TRAK1Q9UPV9 953 aa22.73■■□□□ 1.23
USHBP1-204ENST00000594190 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
USHBP1-204ENST00000594190 TRPC5Q9UL62 973 aaPredicted RBP22.72■■□□□ 1.23
USHBP1-204ENST00000594190 PRR36Q9H6K5 1346 aa22.72■■□□□ 1.23
USHBP1-204ENST00000594190 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
USHBP1-204ENST00000594190 POGKQ9P215 609 aa22.7■■□□□ 1.22
USHBP1-204ENST00000594190 PLCH1Q4KWH8 1693 aa22.7■■□□□ 1.22
USHBP1-204ENST00000594190 NWD2Q9ULI1 1742 aa22.7■■□□□ 1.22
USHBP1-204ENST00000594190 ITSN1Q15811 1721 aa22.69■■□□□ 1.22
USHBP1-204ENST00000594190 GLI3P10071 1580 aa22.69■■□□□ 1.22
USHBP1-204ENST00000594190 TOPAZ1Q8N9V7 1692 aa22.68■■□□□ 1.22
USHBP1-204ENST00000594190 TRPM1Q7Z4N2 1603 aa22.67■■□□□ 1.22
USHBP1-204ENST00000594190 ATP7BP35670 1465 aa22.66■■□□□ 1.22
USHBP1-204ENST00000594190 WASLO00401 505 aaPredicted RBP22.66■■□□□ 1.22
USHBP1-204ENST00000594190 EIF4G2P78344 907 aaKnown RBP eCLIP22.66■■□□□ 1.22
USHBP1-204ENST00000594190 HIRIP3Q9BW71 556 aaPredicted RBP22.66■■□□□ 1.22
USHBP1-204ENST00000594190 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
USHBP1-204ENST00000594190 PSME1Q06323 249 aa22.65■■□□□ 1.22
USHBP1-204ENST00000594190 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
USHBP1-204ENST00000594190 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
USHBP1-204ENST00000594190 EIF3AQ14152 1382 aaKnown RBP22.64■■□□□ 1.22
USHBP1-204ENST00000594190 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.22
USHBP1-204ENST00000594190 PMFBP1Q8TBY8 1022 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms