RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
SOD3-202ENST00000593742 MYOM2P54296 1465 aa17.56■□□□□ 0.4
SOD3-202ENST00000593742 NUTM2BA6NNL0 878 aaPredicted RBP17.56■□□□□ 0.4
SOD3-202ENST00000593742 NUTM2EB1AL46 878 aaPredicted RBP17.56■□□□□ 0.4
SOD3-202ENST00000593742 NUTM2AQ8IVF1 878 aaPredicted RBP17.56■□□□□ 0.4
SOD3-202ENST00000593742 KDM2AQ9Y2K7 1162 aa17.56■□□□□ 0.4
SOD3-202ENST00000593742 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
SOD3-202ENST00000593742 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
SOD3-202ENST00000593742 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
SOD3-202ENST00000593742 NUTM2FA1L443 756 aa17.55■□□□□ 0.4
SOD3-202ENST00000593742 HRCP23327 699 aa17.55■□□□□ 0.4
SOD3-202ENST00000593742 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
SOD3-202ENST00000593742 LRP6O75581 1613 aa17.54■□□□□ 0.4
SOD3-202ENST00000593742 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
SOD3-202ENST00000593742 SHPRHQ149N8 1683 aa17.54■□□□□ 0.4
SOD3-202ENST00000593742 SPATA31A6Q5VVP1 1343 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 TECPR2O15040 1411 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
SOD3-202ENST00000593742 SAFB2Q14151 953 aaKnown RBP eCLIP17.52■□□□□ 0.4
SOD3-202ENST00000593742 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
SOD3-202ENST00000593742 CDC42BPGQ6DT37 1551 aa17.52■□□□□ 0.39
SOD3-202ENST00000593742 LAMC1P11047 1609 aa17.51■□□□□ 0.39
SOD3-202ENST00000593742 POTEAQ6S8J7 498 aa17.51■□□□□ 0.39
SOD3-202ENST00000593742 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
SOD3-202ENST00000593742 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
SOD3-202ENST00000593742 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
SOD3-202ENST00000593742 XPCQ01831 940 aaPredicted RBP17.47■□□□□ 0.39
SOD3-202ENST00000593742 POGKQ9P215 609 aa17.47■□□□□ 0.39
SOD3-202ENST00000593742 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.39
SOD3-202ENST00000593742 TRAK1Q9UPV9 953 aa17.45■□□□□ 0.38
SOD3-202ENST00000593742 FOXO3O43524 673 aa17.44■□□□□ 0.38
SOD3-202ENST00000593742 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
SOD3-202ENST00000593742 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
SOD3-202ENST00000593742 ADAMTS2O95450 1211 aa17.43■□□□□ 0.38
SOD3-202ENST00000593742 ADGRB1O14514 1584 aa17.43■□□□□ 0.38
SOD3-202ENST00000593742 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
SOD3-202ENST00000593742 ZNF772Q68DY9 489 aaPredicted RBP17.42■□□□□ 0.38
SOD3-202ENST00000593742 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
SOD3-202ENST00000593742 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
SOD3-202ENST00000593742 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
SOD3-202ENST00000593742 DLC1Q96QB1 1528 aa17.4■□□□□ 0.38
SOD3-202ENST00000593742 AFF2P51816 1311 aa17.4■□□□□ 0.38
SOD3-202ENST00000593742 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
SOD3-202ENST00000593742 PXDNQ92626 1479 aa17.38■□□□□ 0.37
SOD3-202ENST00000593742 RGPD8O14715 1765 aaPredicted RBP17.38■□□□□ 0.37
SOD3-202ENST00000593742 STAC3Q96MF2 364 aa17.38■□□□□ 0.37
SOD3-202ENST00000593742 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
SOD3-202ENST00000593742 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
SOD3-202ENST00000593742 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
SOD3-202ENST00000593742 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
SOD3-202ENST00000593742 NEUROD1Q13562 356 aa17.34■□□□□ 0.37
SOD3-202ENST00000593742 KRT28Q7Z3Y7 464 aa17.34■□□□□ 0.37
SOD3-202ENST00000593742 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
SOD3-202ENST00000593742 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
SOD3-202ENST00000593742 ADGRB2O60241 1585 aa17.33■□□□□ 0.37
SOD3-202ENST00000593742 RXRBP28702 533 aa17.33■□□□□ 0.36
SOD3-202ENST00000593742 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
SOD3-202ENST00000593742 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
SOD3-202ENST00000593742 COL22A1Q8NFW1 1626 aaPredicted RBP17.32■□□□□ 0.36
SOD3-202ENST00000593742 DCAF8L1A6NGE4 600 aa17.32■□□□□ 0.36
SOD3-202ENST00000593742 USP32Q8NFA0 1604 aa17.32■□□□□ 0.36
SOD3-202ENST00000593742 PSME1Q06323 249 aa17.31■□□□□ 0.36
SOD3-202ENST00000593742 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
SOD3-202ENST00000593742 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
SOD3-202ENST00000593742 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
SOD3-202ENST00000593742 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
SOD3-202ENST00000593742 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
SOD3-202ENST00000593742 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
SOD3-202ENST00000593742 L3MBTL2Q969R5 705 aa17.29■□□□□ 0.36
SOD3-202ENST00000593742 USP21Q9UK80 565 aa17.29■□□□□ 0.36
SOD3-202ENST00000593742 EIF3AQ14152 1382 aaKnown RBP17.28■□□□□ 0.36
SOD3-202ENST00000593742 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
SOD3-202ENST00000593742 TULP4Q9NRJ4 1543 aa17.28■□□□□ 0.36
SOD3-202ENST00000593742 KIAA1210Q9ULL0 1709 aa17.28■□□□□ 0.36
SOD3-202ENST00000593742 TNS3Q68CZ2 1445 aa17.28■□□□□ 0.36
SOD3-202ENST00000593742 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
SOD3-202ENST00000593742 RBM6P78332 1123 aaKnown RBP17.25■□□□□ 0.35
SOD3-202ENST00000593742 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
SOD3-202ENST00000593742 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
SOD3-202ENST00000593742 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
SOD3-202ENST00000593742 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
SOD3-202ENST00000593742 RGS12O14924 1447 aa17.23■□□□□ 0.35
SOD3-202ENST00000593742 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
SOD3-202ENST00000593742 NUDT16Q96DE0 195 aaKnown RBP17.23■□□□□ 0.35
SOD3-202ENST00000593742 TRPC5Q9UL62 973 aaPredicted RBP17.23■□□□□ 0.35
SOD3-202ENST00000593742 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
SOD3-202ENST00000593742 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
SOD3-202ENST00000593742 FNBP4Q8N3X1 1017 aaPredicted RBP17.22■□□□□ 0.35
SOD3-202ENST00000593742 ARHGEF10O15013 1369 aa17.22■□□□□ 0.35
SOD3-202ENST00000593742 ATP7BP35670 1465 aa17.22■□□□□ 0.35
SOD3-202ENST00000593742 CENPJQ9HC77 1338 aaPredicted RBP17.21■□□□□ 0.34
SOD3-202ENST00000593742 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
SOD3-202ENST00000593742 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
SOD3-202ENST00000593742 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
SOD3-202ENST00000593742 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
SOD3-202ENST00000593742 ATRNO75882 1429 aa17.19■□□□□ 0.34
SOD3-202ENST00000593742 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms