RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 FMN2Q9NZ56 1722 aa22.05■■□□□ 1.12
PNKP-202ENST00000593706 SOS2Q07890 1332 aaPredicted RBP22.05■■□□□ 1.12
PNKP-202ENST00000593706 NGLY1Q96IV0 654 aa22.04■■□□□ 1.12
PNKP-202ENST00000593706 QTRT2Q9H974 415 aaKnown RBP22.04■■□□□ 1.12
PNKP-202ENST00000593706 EP400Q96L91 3159 aa22.04■■□□□ 1.12
PNKP-202ENST00000593706 RGPD8O14715 1765 aaPredicted RBP22.04■■□□□ 1.12
PNKP-202ENST00000593706 RBM6P78332 1123 aaKnown RBP22.03■■□□□ 1.12
PNKP-202ENST00000593706 KIF1AQ12756 1690 aa22.03■■□□□ 1.12
PNKP-202ENST00000593706 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
PNKP-202ENST00000593706 PXDNQ92626 1479 aa22.01■■□□□ 1.11
PNKP-202ENST00000593706 ADGRF5Q8IZF2 1346 aa22.01■■□□□ 1.11
PNKP-202ENST00000593706 ANKRD30BQ9BXX2 1392 aa22■■□□□ 1.11
PNKP-202ENST00000593706 TECPR2O15040 1411 aa22■■□□□ 1.11
PNKP-202ENST00000593706 RGL3Q3MIN7 710 aa22■■□□□ 1.11
PNKP-202ENST00000593706 NPHP3Q7Z494 1330 aa22■■□□□ 1.11
PNKP-202ENST00000593706 ESCO1Q5FWF5 840 aa21.99■■□□□ 1.11
PNKP-202ENST00000593706 STK26Q9P289 416 aa21.98■■□□□ 1.11
PNKP-202ENST00000593706 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
PNKP-202ENST00000593706 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
PNKP-202ENST00000593706 USP21Q9UK80 565 aa21.97■■□□□ 1.11
PNKP-202ENST00000593706 MYOM2P54296 1465 aa21.96■■□□□ 1.11
PNKP-202ENST00000593706 LRPPRCP42704 1394 aaKnown RBP21.96■■□□□ 1.11
PNKP-202ENST00000593706 MPHOSPH9Q99550 1183 aa21.95■■□□□ 1.1
PNKP-202ENST00000593706 NUTM2FA1L443 756 aa21.93■■□□□ 1.1
PNKP-202ENST00000593706 XPCQ01831 940 aaPredicted RBP21.93■■□□□ 1.1
PNKP-202ENST00000593706 ATAD2Q6PL18 1390 aa21.93■■□□□ 1.1
PNKP-202ENST00000593706 WAPLQ7Z5K2 1190 aa21.93■■□□□ 1.1
PNKP-202ENST00000593706 TRPC5Q9UL62 973 aaPredicted RBP21.93■■□□□ 1.1
PNKP-202ENST00000593706 YTHDC2Q9H6S0 1430 aaKnown RBP21.92■■□□□ 1.1
PNKP-202ENST00000593706 ABCC11Q96J66 1382 aa21.92■■□□□ 1.1
PNKP-202ENST00000593706 TMEM132EQ6IEE7 984 aa21.92■■□□□ 1.1
PNKP-202ENST00000593706 SRCAPQ6ZRS2 3230 aa21.92■■□□□ 1.1
PNKP-202ENST00000593706 ATRNO75882 1429 aa21.91■■□□□ 1.1
PNKP-202ENST00000593706 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
PNKP-202ENST00000593706 FOXO3O43524 673 aa21.91■■□□□ 1.1
PNKP-202ENST00000593706 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
PNKP-202ENST00000593706 FNBP4Q8N3X1 1017 aaPredicted RBP21.9■■□□□ 1.1
PNKP-202ENST00000593706 USP32Q8NFA0 1604 aa21.9■■□□□ 1.1
PNKP-202ENST00000593706 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
PNKP-202ENST00000593706 BRWD3Q6RI45 1802 aa21.87■■□□□ 1.09
PNKP-202ENST00000593706 BCL9LQ86UU0 1499 aa21.85■■□□□ 1.09
PNKP-202ENST00000593706 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
PNKP-202ENST00000593706 ACIN1Q9UKV3 1341 aaKnown RBP21.84■■□□□ 1.09
PNKP-202ENST00000593706 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
PNKP-202ENST00000593706 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
PNKP-202ENST00000593706 GLI3P10071 1580 aa21.82■■□□□ 1.08
PNKP-202ENST00000593706 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
PNKP-202ENST00000593706 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
PNKP-202ENST00000593706 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
PNKP-202ENST00000593706 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
PNKP-202ENST00000593706 SLIT2O94813 1529 aa21.79■■□□□ 1.08
PNKP-202ENST00000593706 DLC1Q96QB1 1528 aa21.79■■□□□ 1.08
PNKP-202ENST00000593706 HAP1P54257 671 aaPredicted RBP21.78■■□□□ 1.08
PNKP-202ENST00000593706 KRT28Q7Z3Y7 464 aa21.78■■□□□ 1.08
PNKP-202ENST00000593706 SAFB2Q14151 953 aaKnown RBP eCLIP21.77■■□□□ 1.08
PNKP-202ENST00000593706 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
PNKP-202ENST00000593706 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.07
PNKP-202ENST00000593706 SIRT1Q96EB6 747 aa21.76■■□□□ 1.07
PNKP-202ENST00000593706 GJD4Q96KN9 370 aaPredicted RBP21.76■■□□□ 1.07
PNKP-202ENST00000593706 TRPM3Q9HCF6 1732 aaPredicted RBP21.76■■□□□ 1.07
PNKP-202ENST00000593706 PHF8Q9UPP1 1060 aa21.76■■□□□ 1.07
PNKP-202ENST00000593706 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
PNKP-202ENST00000593706 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
PNKP-202ENST00000593706 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
PNKP-202ENST00000593706 PSME1Q06323 249 aa21.74■■□□□ 1.07
PNKP-202ENST00000593706 UNC5CLQ8IV45 518 aa21.74■■□□□ 1.07
PNKP-202ENST00000593706 ADGRB1O14514 1584 aa21.74■■□□□ 1.07
PNKP-202ENST00000593706 ALS2Q96Q42 1657 aa21.73■■□□□ 1.07
PNKP-202ENST00000593706 PLEKHG5O94827 1062 aa21.73■■□□□ 1.07
PNKP-202ENST00000593706 POGKQ9P215 609 aa21.73■■□□□ 1.07
PNKP-202ENST00000593706 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
PNKP-202ENST00000593706 NRAPQ86VF7 1730 aa21.72■■□□□ 1.07
PNKP-202ENST00000593706 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
PNKP-202ENST00000593706 LMOD2Q6P5Q4 547 aa21.72■■□□□ 1.07
PNKP-202ENST00000593706 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
PNKP-202ENST00000593706 SBNO1A3KN83 1393 aa21.71■■□□□ 1.07
PNKP-202ENST00000593706 CRYBG1Q9Y4K1 1723 aa21.69■■□□□ 1.06
PNKP-202ENST00000593706 CABLES1Q8TDN4 633 aa21.69■■□□□ 1.06
PNKP-202ENST00000593706 COL14A1Q05707 1796 aaKnown RBP21.69■■□□□ 1.06
PNKP-202ENST00000593706 CCDC125Q86Z20 511 aa21.68■■□□□ 1.06
PNKP-202ENST00000593706 ZRANB1Q9UGI0 708 aa21.68■■□□□ 1.06
PNKP-202ENST00000593706 TULP4Q9NRJ4 1543 aa21.68■■□□□ 1.06
PNKP-202ENST00000593706 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
PNKP-202ENST00000593706 CCDC9Q9Y3X0 531 aaKnown RBP21.67■■□□□ 1.06
PNKP-202ENST00000593706 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
PNKP-202ENST00000593706 BLMP54132 1417 aaPredicted RBP21.65■■□□□ 1.06
PNKP-202ENST00000593706 HIRIP3Q9BW71 556 aaPredicted RBP21.65■■□□□ 1.06
PNKP-202ENST00000593706 TRAK1Q9UPV9 953 aa21.65■■□□□ 1.06
PNKP-202ENST00000593706 MINK1Q8N4C8 1332 aaPredicted RBP21.63■■□□□ 1.05
PNKP-202ENST00000593706 VPS72Q15906 364 aa21.63■■□□□ 1.05
PNKP-202ENST00000593706 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
PNKP-202ENST00000593706 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
PNKP-202ENST00000593706 SEPT12Q8IYM1 358 aa21.61■■□□□ 1.05
PNKP-202ENST00000593706 DCAF11Q8TEB1 546 aa21.61■■□□□ 1.05
PNKP-202ENST00000593706 PHRF1Q9P1Y6 1649 aaKnown RBP21.61■■□□□ 1.05
PNKP-202ENST00000593706 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
PNKP-202ENST00000593706 A0A0G2JS52 829 aa21.59■■□□□ 1.05
PNKP-202ENST00000593706 MYT1Q01538 1121 aa21.59■■□□□ 1.05
PNKP-202ENST00000593706 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
PNKP-202ENST00000593706 TOPAZ1Q8N9V7 1692 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms