RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
SRRM1-221ENST00000593639 NPHP3Q7Z494 1330 aa14.1□□□□□ -0.15
SRRM1-221ENST00000593639 FOXO3O43524 673 aa14.09□□□□□ -0.15
SRRM1-221ENST00000593639 CLTCL1P53675 1640 aa14.08□□□□□ -0.15
SRRM1-221ENST00000593639 COL22A1Q8NFW1 1626 aaPredicted RBP14.08□□□□□ -0.15
SRRM1-221ENST00000593639 HFM1A2PYH4 1435 aa14.08□□□□□ -0.15
SRRM1-221ENST00000593639 PXDNQ92626 1479 aa14.08□□□□□ -0.16
SRRM1-221ENST00000593639 SPHKAPQ2M3C7 1700 aa14.08□□□□□ -0.16
SRRM1-221ENST00000593639 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
SRRM1-221ENST00000593639 DEFB132Q7Z7B7 95 aa14.08□□□□□ -0.16
SRRM1-221ENST00000593639 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
SRRM1-221ENST00000593639 UNC5CLQ8IV45 518 aa14.06□□□□□ -0.16
SRRM1-221ENST00000593639 RALGAPBQ86X10 1494 aa14.06□□□□□ -0.16
SRRM1-221ENST00000593639 NUTM2FA1L443 756 aa14.04□□□□□ -0.16
SRRM1-221ENST00000593639 SLIT2O94813 1529 aa14.04□□□□□ -0.16
SRRM1-221ENST00000593639 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
SRRM1-221ENST00000593639 GLI3P10071 1580 aa14.02□□□□□ -0.16
SRRM1-221ENST00000593639 CDC42BPGQ6DT37 1551 aa14.02□□□□□ -0.16
SRRM1-221ENST00000593639 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
SRRM1-221ENST00000593639 SEPT12Q8IYM1 358 aa14.02□□□□□ -0.17
SRRM1-221ENST00000593639 NAIPQ13075 1403 aa14.01□□□□□ -0.17
SRRM1-221ENST00000593639 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
SRRM1-221ENST00000593639 WAPLQ7Z5K2 1190 aa14.01□□□□□ -0.17
SRRM1-221ENST00000593639 SF3B2Q13435 895 aaKnown RBP14□□□□□ -0.17
SRRM1-221ENST00000593639 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
SRRM1-221ENST00000593639 STK26Q9P289 416 aa13.99□□□□□ -0.17
SRRM1-221ENST00000593639 PLEKHH1Q9ULM0 1364 aa13.98□□□□□ -0.17
SRRM1-221ENST00000593639 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
SRRM1-221ENST00000593639 VPS72Q15906 364 aa13.98□□□□□ -0.17
SRRM1-221ENST00000593639 PSDA5PKW4 1024 aaPredicted RBP13.97□□□□□ -0.17
SRRM1-221ENST00000593639 ONECUT3O60422 494 aaPredicted RBP13.97□□□□□ -0.17
SRRM1-221ENST00000593639 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
SRRM1-221ENST00000593639 CABLES1Q8TDN4 633 aa13.97□□□□□ -0.17
SRRM1-221ENST00000593639 TECPR2O15040 1411 aa13.97□□□□□ -0.17
SRRM1-221ENST00000593639 KRT27Q7Z3Y8 459 aa13.96□□□□□ -0.17
SRRM1-221ENST00000593639 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.18
SRRM1-221ENST00000593639 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
SRRM1-221ENST00000593639 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
SRRM1-221ENST00000593639 HRCP23327 699 aa13.95□□□□□ -0.18
SRRM1-221ENST00000593639 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
SRRM1-221ENST00000593639 CCDC9Q9Y3X0 531 aaKnown RBP13.95□□□□□ -0.18
SRRM1-221ENST00000593639 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
SRRM1-221ENST00000593639 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
SRRM1-221ENST00000593639 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
SRRM1-221ENST00000593639 MARF1Q9Y4F3 1742 aaKnown RBP13.94□□□□□ -0.18
SRRM1-221ENST00000593639 KIF1BO60333 1816 aa13.94□□□□□ -0.18
SRRM1-221ENST00000593639 LRP5O75197 1615 aa13.93□□□□□ -0.18
SRRM1-221ENST00000593639 USP32Q8NFA0 1604 aa13.93□□□□□ -0.18
SRRM1-221ENST00000593639 TNS3Q68CZ2 1445 aa13.92□□□□□ -0.18
SRRM1-221ENST00000593639 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
SRRM1-221ENST00000593639 FAM83GA6ND36 823 aa13.91□□□□□ -0.18
SRRM1-221ENST00000593639 BAG6P46379 1132 aa13.91□□□□□ -0.18
SRRM1-221ENST00000593639 RGL3Q3MIN7 710 aa13.91□□□□□ -0.18
SRRM1-221ENST00000593639 PHF8Q9UPP1 1060 aa13.91□□□□□ -0.18
SRRM1-221ENST00000593639 A0A0G2JS52 829 aa13.9□□□□□ -0.18
SRRM1-221ENST00000593639 MYT1Q01538 1121 aa13.9□□□□□ -0.18
SRRM1-221ENST00000593639 PSME1Q06323 249 aa13.9□□□□□ -0.18
SRRM1-221ENST00000593639 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
SRRM1-221ENST00000593639 PPLO60437 1756 aa13.89□□□□□ -0.19
SRRM1-221ENST00000593639 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
SRRM1-221ENST00000593639 EN1Q05925 392 aaPredicted RBP13.89□□□□□ -0.19
SRRM1-221ENST00000593639 LMOD2Q6P5Q4 547 aa13.89□□□□□ -0.19
SRRM1-221ENST00000593639 BRWD3Q6RI45 1802 aa13.89□□□□□ -0.19
SRRM1-221ENST00000593639 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
SRRM1-221ENST00000593639 YTHDC2Q9H6S0 1430 aaKnown RBP13.88□□□□□ -0.19
SRRM1-221ENST00000593639 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 R3HDM1Q15032 1099 aaKnown RBP13.87□□□□□ -0.19
SRRM1-221ENST00000593639 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 KIF1AQ12756 1690 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
SRRM1-221ENST00000593639 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
SRRM1-221ENST00000593639 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
SRRM1-221ENST00000593639 FMN2Q9NZ56 1722 aa13.86□□□□□ -0.19
SRRM1-221ENST00000593639 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
SRRM1-221ENST00000593639 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
SRRM1-221ENST00000593639 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
SRRM1-221ENST00000593639 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
SRRM1-221ENST00000593639 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
SRRM1-221ENST00000593639 NWD2Q9ULI1 1742 aa13.83□□□□□ -0.2
SRRM1-221ENST00000593639 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
SRRM1-221ENST00000593639 KNDC1Q76NI1 1749 aa13.82□□□□□ -0.2
SRRM1-221ENST00000593639 EZH2Q15910 746 aaKnown RBP13.82□□□□□ -0.2
SRRM1-221ENST00000593639 SPATA31A5Q5VU36 1347 aa13.82□□□□□ -0.2
SRRM1-221ENST00000593639 SPATA31A7Q8IWB4 1347 aa13.82□□□□□ -0.2
SRRM1-221ENST00000593639 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
SRRM1-221ENST00000593639 CAMKK2Q96RR4 588 aa13.79□□□□□ -0.2
SRRM1-221ENST00000593639 DHX57Q6P158 1386 aaKnown RBP13.79□□□□□ -0.2
SRRM1-221ENST00000593639 ANKARQ7Z5J8 1434 aa13.79□□□□□ -0.2
SRRM1-221ENST00000593639 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
SRRM1-221ENST00000593639 ABCA3Q99758 1704 aa13.78□□□□□ -0.2
SRRM1-221ENST00000593639 TRIM37O94972 964 aa13.78□□□□□ -0.2
SRRM1-221ENST00000593639 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
SRRM1-221ENST00000593639 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.21
SRRM1-221ENST00000593639 ACIN1Q9UKV3 1341 aaKnown RBP13.77□□□□□ -0.21
SRRM1-221ENST00000593639 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
SRRM1-221ENST00000593639 YY1P25490 414 aa13.76□□□□□ -0.21
SRRM1-221ENST00000593639 HIRIP3Q9BW71 556 aaPredicted RBP13.76□□□□□ -0.21
SRRM1-221ENST00000593639 POGKQ9P215 609 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms