RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 RBM6P78332 1123 aaKnown RBP26.22■■□□□ 1.79
RETREG3-212ENST00000593251 RGL3Q3MIN7 710 aa26.21■■□□□ 1.79
RETREG3-212ENST00000593251 COL22A1Q8NFW1 1626 aaPredicted RBP26.2■■□□□ 1.78
RETREG3-212ENST00000593251 CCDC144AA2RUR9 1427 aa26.2■■□□□ 1.78
RETREG3-212ENST00000593251 STK26Q9P289 416 aa26.19■■□□□ 1.78
RETREG3-212ENST00000593251 ESCO1Q5FWF5 840 aa26.18■■□□□ 1.78
RETREG3-212ENST00000593251 SPATA31E1Q6ZUB1 1445 aa26.17■■□□□ 1.78
RETREG3-212ENST00000593251 KNDC1Q76NI1 1749 aa26.16■■□□□ 1.78
RETREG3-212ENST00000593251 MARF1Q9Y4F3 1742 aaKnown RBP26.16■■□□□ 1.78
RETREG3-212ENST00000593251 WAPLQ7Z5K2 1190 aa26.15■■□□□ 1.78
RETREG3-212ENST00000593251 NUTM2FA1L443 756 aa26.14■■□□□ 1.78
RETREG3-212ENST00000593251 XPCQ01831 940 aaPredicted RBP26.14■■□□□ 1.78
RETREG3-212ENST00000593251 MPHOSPH9Q99550 1183 aa26.14■■□□□ 1.78
RETREG3-212ENST00000593251 USP21Q9UK80 565 aa26.14■■□□□ 1.78
RETREG3-212ENST00000593251 PXDNQ92626 1479 aa26.14■■□□□ 1.78
RETREG3-212ENST00000593251 TMEM132EQ6IEE7 984 aa26.13■■□□□ 1.77
RETREG3-212ENST00000593251 NPHP3Q7Z494 1330 aa26.13■■□□□ 1.77
RETREG3-212ENST00000593251 TECPR2O15040 1411 aa26.12■■□□□ 1.77
RETREG3-212ENST00000593251 LRPPRCP42704 1394 aaKnown RBP26.11■■□□□ 1.77
RETREG3-212ENST00000593251 PLEKHH1Q9ULM0 1364 aa26.11■■□□□ 1.77
RETREG3-212ENST00000593251 FOXO3O43524 673 aa26.11■■□□□ 1.77
RETREG3-212ENST00000593251 FMN2Q9NZ56 1722 aa26.11■■□□□ 1.77
RETREG3-212ENST00000593251 MYOM2P54296 1465 aa26.11■■□□□ 1.77
RETREG3-212ENST00000593251 ANKRD30BQ9BXX2 1392 aa26.1■■□□□ 1.77
RETREG3-212ENST00000593251 RGPD8O14715 1765 aaPredicted RBP26.09■■□□□ 1.77
RETREG3-212ENST00000593251 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
RETREG3-212ENST00000593251 FNBP4Q8N3X1 1017 aaPredicted RBP26.08■■□□□ 1.77
RETREG3-212ENST00000593251 TRPC5Q9UL62 973 aaPredicted RBP26.08■■□□□ 1.77
RETREG3-212ENST00000593251 ABCC11Q96J66 1382 aa26.07■■□□□ 1.76
RETREG3-212ENST00000593251 ATRNO75882 1429 aa26.06■■□□□ 1.76
RETREG3-212ENST00000593251 YTHDC2Q9H6S0 1430 aaKnown RBP26.05■■□□□ 1.76
RETREG3-212ENST00000593251 KIF1AQ12756 1690 aa26.03■■□□□ 1.76
RETREG3-212ENST00000593251 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
RETREG3-212ENST00000593251 BCL9LQ86UU0 1499 aa26.02■■□□□ 1.76
RETREG3-212ENST00000593251 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.98■■□□□ 1.75
RETREG3-212ENST00000593251 EP400Q96L91 3159 aa25.96■■□□□ 1.75
RETREG3-212ENST00000593251 C14orf93Q9H972 538 aaKnown RBP25.96■■□□□ 1.75
RETREG3-212ENST00000593251 SPATA31A3Q5VYP0 1347 aa25.95■■□□□ 1.75
RETREG3-212ENST00000593251 CFAP70Q5T0N1 1121 aa25.95■■□□□ 1.74
RETREG3-212ENST00000593251 NRXN1Q9ULB1 1477 aa25.95■■□□□ 1.74
RETREG3-212ENST00000593251 KRT28Q7Z3Y7 464 aa25.94■■□□□ 1.74
RETREG3-212ENST00000593251 USP32Q8NFA0 1604 aa25.94■■□□□ 1.74
RETREG3-212ENST00000593251 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
RETREG3-212ENST00000593251 SIRT1Q96EB6 747 aa25.92■■□□□ 1.74
RETREG3-212ENST00000593251 GJD4Q96KN9 370 aaPredicted RBP25.92■■□□□ 1.74
RETREG3-212ENST00000593251 DHX57Q6P158 1386 aaKnown RBP25.92■■□□□ 1.74
RETREG3-212ENST00000593251 GLI3P10071 1580 aa25.91■■□□□ 1.74
RETREG3-212ENST00000593251 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
RETREG3-212ENST00000593251 SLIT2O94813 1529 aa25.9■■□□□ 1.74
RETREG3-212ENST00000593251 PHF8Q9UPP1 1060 aa25.9■■□□□ 1.74
RETREG3-212ENST00000593251 BRWD3Q6RI45 1802 aa25.9■■□□□ 1.74
RETREG3-212ENST00000593251 ABCA3Q99758 1704 aa25.89■■□□□ 1.74
RETREG3-212ENST00000593251 PRAM1Q96QH2 718 aa25.89■■□□□ 1.74
RETREG3-212ENST00000593251 PLCH1Q4KWH8 1693 aa25.88■■□□□ 1.73
RETREG3-212ENST00000593251 TNS3Q68CZ2 1445 aa25.88■■□□□ 1.73
RETREG3-212ENST00000593251 RALGAPBQ86X10 1494 aa25.87■■□□□ 1.73
RETREG3-212ENST00000593251 UNC5CLQ8IV45 518 aa25.87■■□□□ 1.73
RETREG3-212ENST00000593251 CABLES1Q8TDN4 633 aa25.87■■□□□ 1.73
RETREG3-212ENST00000593251 RAB3GAP2Q9H2M9 1393 aa25.85■■□□□ 1.73
RETREG3-212ENST00000593251 HAP1P54257 671 aaPredicted RBP25.85■■□□□ 1.73
RETREG3-212ENST00000593251 ACIN1Q9UKV3 1341 aaKnown RBP25.84■■□□□ 1.73
RETREG3-212ENST00000593251 DLC1Q96QB1 1528 aa25.83■■□□□ 1.73
RETREG3-212ENST00000593251 PSME1Q06323 249 aa25.83■■□□□ 1.73
RETREG3-212ENST00000593251 LMOD2Q6P5Q4 547 aa25.83■■□□□ 1.73
RETREG3-212ENST00000593251 POGKQ9P215 609 aa25.82■■□□□ 1.72
RETREG3-212ENST00000593251 NWD2Q9ULI1 1742 aa25.82■■□□□ 1.72
RETREG3-212ENST00000593251 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
RETREG3-212ENST00000593251 PMFBP1Q8TBY8 1022 aa25.81■■□□□ 1.72
RETREG3-212ENST00000593251 ADGRB2O60241 1585 aa25.81■■□□□ 1.72
RETREG3-212ENST00000593251 SBNO1A3KN83 1393 aa25.8■■□□□ 1.72
RETREG3-212ENST00000593251 SRCAPQ6ZRS2 3230 aa25.8■■□□□ 1.72
RETREG3-212ENST00000593251 HIRIP3Q9BW71 556 aaPredicted RBP25.79■■□□□ 1.72
RETREG3-212ENST00000593251 TRPM3Q9HCF6 1732 aaPredicted RBP25.79■■□□□ 1.72
RETREG3-212ENST00000593251 CCDC125Q86Z20 511 aa25.78■■□□□ 1.72
RETREG3-212ENST00000593251 ZRANB1Q9UGI0 708 aa25.78■■□□□ 1.72
RETREG3-212ENST00000593251 TRAK1Q9UPV9 953 aa25.78■■□□□ 1.72
RETREG3-212ENST00000593251 KDM2AQ9Y2K7 1162 aa25.77■■□□□ 1.72
RETREG3-212ENST00000593251 ANKARQ7Z5J8 1434 aa25.77■■□□□ 1.72
RETREG3-212ENST00000593251 ARHGEF10O15013 1369 aa25.76■■□□□ 1.71
RETREG3-212ENST00000593251 MINK1Q8N4C8 1332 aaPredicted RBP25.75■■□□□ 1.71
RETREG3-212ENST00000593251 CCDC9Q9Y3X0 531 aaKnown RBP25.75■■□□□ 1.71
RETREG3-212ENST00000593251 ALS2Q96Q42 1657 aa25.74■■□□□ 1.71
RETREG3-212ENST00000593251 VPS72Q15906 364 aa25.74■■□□□ 1.71
RETREG3-212ENST00000593251 SEPT12Q8IYM1 358 aa25.74■■□□□ 1.71
RETREG3-212ENST00000593251 NRAPQ86VF7 1730 aa25.73■■□□□ 1.71
RETREG3-212ENST00000593251 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
RETREG3-212ENST00000593251 BLMP54132 1417 aaPredicted RBP25.71■■□□□ 1.71
RETREG3-212ENST00000593251 PRR36Q9H6K5 1346 aa25.71■■□□□ 1.71
RETREG3-212ENST00000593251 FAM83GA6ND36 823 aa25.71■■□□□ 1.71
RETREG3-212ENST00000593251 TULP4Q9NRJ4 1543 aa25.7■■□□□ 1.7
RETREG3-212ENST00000593251 ARHGEF28Q8N1W1 1705 aaKnown RBP25.69■■□□□ 1.7
RETREG3-212ENST00000593251 DEFB132Q7Z7B7 95 aa25.68■■□□□ 1.7
RETREG3-212ENST00000593251 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
RETREG3-212ENST00000593251 GPRASP1Q5JY77 1395 aa25.67■■□□□ 1.7
RETREG3-212ENST00000593251 COL14A1Q05707 1796 aaKnown RBP25.67■■□□□ 1.7
RETREG3-212ENST00000593251 WASLO00401 505 aaPredicted RBP25.65■■□□□ 1.7
RETREG3-212ENST00000593251 ONECUT3O60422 494 aaPredicted RBP25.65■■□□□ 1.7
RETREG3-212ENST00000593251 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
RETREG3-212ENST00000593251 ITSN1Q15811 1721 aa25.65■■□□□ 1.7
RETREG3-212ENST00000593251 A0A0G2JS52 829 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms