RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 HFM1A2PYH4 1435 aa15.51■□□□□ 0.07
SMCO4P1-201ENST00000592909 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
SMCO4P1-201ENST00000592909 ESCO1Q5FWF5 840 aa15.5■□□□□ 0.07
SMCO4P1-201ENST00000592909 SPHKAPQ2M3C7 1700 aa15.5■□□□□ 0.07
SMCO4P1-201ENST00000592909 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
SMCO4P1-201ENST00000592909 RPGRIP1LQ68CZ1 1315 aa15.48■□□□□ 0.07
SMCO4P1-201ENST00000592909 PXDNQ92626 1479 aa15.48■□□□□ 0.07
SMCO4P1-201ENST00000592909 FOXO3O43524 673 aa15.48■□□□□ 0.07
SMCO4P1-201ENST00000592909 ITGAEP38570 1179 aa15.48■□□□□ 0.07
SMCO4P1-201ENST00000592909 LRPPRCP42704 1394 aaKnown RBP15.48■□□□□ 0.07
SMCO4P1-201ENST00000592909 CLTCL1P53675 1640 aa15.47■□□□□ 0.07
SMCO4P1-201ENST00000592909 EP400Q96L91 3159 aa15.46■□□□□ 0.07
SMCO4P1-201ENST00000592909 XPCQ01831 940 aaPredicted RBP15.46■□□□□ 0.07
SMCO4P1-201ENST00000592909 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
SMCO4P1-201ENST00000592909 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
SMCO4P1-201ENST00000592909 SLIT2O94813 1529 aa15.45■□□□□ 0.06
SMCO4P1-201ENST00000592909 SF3B2Q13435 895 aaKnown RBP15.44■□□□□ 0.06
SMCO4P1-201ENST00000592909 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
SMCO4P1-201ENST00000592909 CDC42BPGQ6DT37 1551 aa15.42■□□□□ 0.06
SMCO4P1-201ENST00000592909 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
SMCO4P1-201ENST00000592909 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
SMCO4P1-201ENST00000592909 GLI3P10071 1580 aa15.41■□□□□ 0.06
SMCO4P1-201ENST00000592909 VPS72Q15906 364 aa15.41■□□□□ 0.06
SMCO4P1-201ENST00000592909 NAIPQ13075 1403 aa15.41■□□□□ 0.06
SMCO4P1-201ENST00000592909 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
SMCO4P1-201ENST00000592909 MARF1Q9Y4F3 1742 aaKnown RBP15.39■□□□□ 0.05
SMCO4P1-201ENST00000592909 KIF1BO60333 1816 aa15.38■□□□□ 0.05
SMCO4P1-201ENST00000592909 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
SMCO4P1-201ENST00000592909 KRT27Q7Z3Y8 459 aa15.38■□□□□ 0.05
SMCO4P1-201ENST00000592909 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
SMCO4P1-201ENST00000592909 TECPR2O15040 1411 aa15.37■□□□□ 0.05
SMCO4P1-201ENST00000592909 LRP5O75197 1615 aa15.37■□□□□ 0.05
SMCO4P1-201ENST00000592909 KRT28Q7Z3Y7 464 aa15.37■□□□□ 0.05
SMCO4P1-201ENST00000592909 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
SMCO4P1-201ENST00000592909 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
SMCO4P1-201ENST00000592909 HRCP23327 699 aa15.36■□□□□ 0.05
SMCO4P1-201ENST00000592909 BAG6P46379 1132 aa15.35■□□□□ 0.05
SMCO4P1-201ENST00000592909 STK26Q9P289 416 aa15.35■□□□□ 0.05
SMCO4P1-201ENST00000592909 PSDA5PKW4 1024 aaPredicted RBP15.34■□□□□ 0.05
SMCO4P1-201ENST00000592909 PSME1Q06323 249 aa15.34■□□□□ 0.05
SMCO4P1-201ENST00000592909 ADGRF5Q8IZF2 1346 aa15.34■□□□□ 0.05
SMCO4P1-201ENST00000592909 USP32Q8NFA0 1604 aa15.33■□□□□ 0.04
SMCO4P1-201ENST00000592909 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.04
SMCO4P1-201ENST00000592909 CCDC9Q9Y3X0 531 aaKnown RBP15.33■□□□□ 0.04
SMCO4P1-201ENST00000592909 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
SMCO4P1-201ENST00000592909 CABLES1Q8TDN4 633 aa15.32■□□□□ 0.04
SMCO4P1-201ENST00000592909 SIRT1Q96EB6 747 aa15.32■□□□□ 0.04
SMCO4P1-201ENST00000592909 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
SMCO4P1-201ENST00000592909 TNS3Q68CZ2 1445 aa15.32■□□□□ 0.04
SMCO4P1-201ENST00000592909 PHF8Q9UPP1 1060 aa15.31■□□□□ 0.04
SMCO4P1-201ENST00000592909 SBNO1A3KN83 1393 aa15.31■□□□□ 0.04
SMCO4P1-201ENST00000592909 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
SMCO4P1-201ENST00000592909 FAM83GA6ND36 823 aa15.3■□□□□ 0.04
SMCO4P1-201ENST00000592909 PPLO60437 1756 aa15.3■□□□□ 0.04
SMCO4P1-201ENST00000592909 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
SMCO4P1-201ENST00000592909 RRBP1Q9P2E9 1410 aaKnown RBP15.3■□□□□ 0.04
SMCO4P1-201ENST00000592909 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
SMCO4P1-201ENST00000592909 KIF1AQ12756 1690 aa15.28■□□□□ 0.04
SMCO4P1-201ENST00000592909 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
SMCO4P1-201ENST00000592909 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
SMCO4P1-201ENST00000592909 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
SMCO4P1-201ENST00000592909 PPARGC1BQ86YN6 1023 aaKnown RBP15.27■□□□□ 0.04
SMCO4P1-201ENST00000592909 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 FMN2Q9NZ56 1722 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 A0A0G2JS52 829 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 MYT1Q01538 1121 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 RGL3Q3MIN7 710 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 LMOD2Q6P5Q4 547 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
SMCO4P1-201ENST00000592909 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
SMCO4P1-201ENST00000592909 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
SMCO4P1-201ENST00000592909 DISP2A7MBM2 1401 aa15.25■□□□□ 0.03
SMCO4P1-201ENST00000592909 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
SMCO4P1-201ENST00000592909 R3HDM1Q15032 1099 aaKnown RBP15.24■□□□□ 0.03
SMCO4P1-201ENST00000592909 BTG4Q9NY30 223 aa15.24■□□□□ 0.03
SMCO4P1-201ENST00000592909 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
SMCO4P1-201ENST00000592909 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
SMCO4P1-201ENST00000592909 C14orf93Q9H972 538 aaKnown RBP15.22■□□□□ 0.03
SMCO4P1-201ENST00000592909 PLCH1Q4KWH8 1693 aa15.22■□□□□ 0.03
SMCO4P1-201ENST00000592909 SPATA31A5Q5VU36 1347 aa15.21■□□□□ 0.03
SMCO4P1-201ENST00000592909 SPATA31A7Q8IWB4 1347 aa15.21■□□□□ 0.03
SMCO4P1-201ENST00000592909 FAM182BQ5T319 152 aa15.21■□□□□ 0.03
SMCO4P1-201ENST00000592909 EZH2Q15910 746 aaKnown RBP15.2■□□□□ 0.02
SMCO4P1-201ENST00000592909 PMFBP1Q8TBY8 1022 aa15.2■□□□□ 0.02
SMCO4P1-201ENST00000592909 CAMKK2Q96RR4 588 aa15.2■□□□□ 0.02
SMCO4P1-201ENST00000592909 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
SMCO4P1-201ENST00000592909 ANKARQ7Z5J8 1434 aa15.18■□□□□ 0.02
SMCO4P1-201ENST00000592909 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
SMCO4P1-201ENST00000592909 FAM196AQ6ZSG2 479 aa15.17■□□□□ 0.02
SMCO4P1-201ENST00000592909 NRAPQ86VF7 1730 aa15.17■□□□□ 0.02
SMCO4P1-201ENST00000592909 ABCA3Q99758 1704 aa15.17■□□□□ 0.02
SMCO4P1-201ENST00000592909 YY1P25490 414 aa15.16■□□□□ 0.02
SMCO4P1-201ENST00000592909 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMCO4P1-201ENST00000592909 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
SMCO4P1-201ENST00000592909 RGPD1P0DJD0 1748 aa15.15■□□□□ 0.02
SMCO4P1-201ENST00000592909 GPRASP1Q5JY77 1395 aa15.15■□□□□ 0.02
SMCO4P1-201ENST00000592909 PARD3Q8TEW0 1356 aa15.15■□□□□ 0.02
SMCO4P1-201ENST00000592909 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
SMCO4P1-201ENST00000592909 TRIM37O94972 964 aa15.14■□□□□ 0.01
SMCO4P1-201ENST00000592909 POGKQ9P215 609 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms