RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, human

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN2-215	ENST00000592776	C14orf93	Q9H972	538 aa	Known RBP	32.42	■■■□□ 2.78
PTPN2-215	ENST00000592776	ABCC11	Q96J66	1382 aa		32.41	■■■□□ 2.78
PTPN2-215	ENST00000592776	TECPR2	O15040	1411 aa		32.41	■■■□□ 2.78
PTPN2-215	ENST00000592776	NUTM2F	A1L443	756 aa		32.39	■■■□□ 2.78
PTPN2-215	ENST00000592776	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.39	■■■□□ 2.78
PTPN2-215	ENST00000592776	NRXN1	Q9ULB1	1477 aa		32.38	■■■□□ 2.77
PTPN2-215	ENST00000592776	MYOM2	P54296	1465 aa		32.36	■■■□□ 2.77
PTPN2-215	ENST00000592776	PNPLA6	Q8IY17	1366 aa		32.36	■■■□□ 2.77
PTPN2-215	ENST00000592776	HRC	P23327	699 aa		32.36	■■■□□ 2.77
PTPN2-215	ENST00000592776	KNDC1	Q76NI1	1749 aa		32.34	■■■□□ 2.77
PTPN2-215	ENST00000592776	CDC42BPG	Q6DT37	1551 aa		32.34	■■■□□ 2.77
PTPN2-215	ENST00000592776	ESCO1	Q5FWF5	840 aa		32.34	■■■□□ 2.77
PTPN2-215	ENST00000592776	SOS2	Q07890	1332 aa	Predicted RBP	32.33	■■■□□ 2.77
PTPN2-215	ENST00000592776	KDM2A	Q9Y2K7	1162 aa		32.33	■■■□□ 2.77
PTPN2-215	ENST00000592776	LAMC1	P11047	1609 aa		32.31	■■■□□ 2.76
PTPN2-215	ENST00000592776	DHX57	Q6P158	1386 aa	Known RBP	32.3	■■■□□ 2.76
PTPN2-215	ENST00000592776	ZNF772	Q68DY9	489 aa	Predicted RBP	32.28	■■■□□ 2.76
PTPN2-215	ENST00000592776	DCAF11	Q8TEB1	546 aa		32.28	■■■□□ 2.76
PTPN2-215	ENST00000592776	XPC	Q01831	940 aa	Predicted RBP	32.27	■■■□□ 2.76
PTPN2-215	ENST00000592776	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.27	■■■□□ 2.76
PTPN2-215	ENST00000592776	FOXO3	O43524	673 aa		32.26	■■■□□ 2.75
PTPN2-215	ENST00000592776	SIRT1	Q96EB6	747 aa		32.26	■■■□□ 2.75
PTPN2-215	ENST00000592776	AFF2	P51816	1311 aa		32.26	■■■□□ 2.75
PTPN2-215	ENST00000592776	PRAM1	Q96QH2	718 aa		32.24	■■■□□ 2.75
PTPN2-215	ENST00000592776	ADAMTS2	O95450	1211 aa		32.23	■■■□□ 2.75
PTPN2-215	ENST00000592776	C8orf37	Q96NL8	207 aa		32.23	■■■□□ 2.75
PTPN2-215	ENST00000592776	NPHP3	Q7Z494	1330 aa		32.21	■■■□□ 2.75
PTPN2-215	ENST00000592776	FMN2	Q9NZ56	1722 aa		32.2	■■■□□ 2.75
PTPN2-215	ENST00000592776	PXDN	Q92626	1479 aa		32.18	■■■□□ 2.74
PTPN2-215	ENST00000592776	TRAK1	Q9UPV9	953 aa		32.18	■■■□□ 2.74
PTPN2-215	ENST00000592776	ADGRB1	O14514	1584 aa		32.18	■■■□□ 2.74
PTPN2-215	ENST00000592776	POGK	Q9P215	609 aa		32.16	■■■□□ 2.74
PTPN2-215	ENST00000592776	RXRB	P28702	533 aa		32.14	■■■□□ 2.74
PTPN2-215	ENST00000592776	NGLY1	Q96IV0	654 aa		32.13	■■■□□ 2.73
PTPN2-215	ENST00000592776	DLC1	Q96QB1	1528 aa		32.12	■■■□□ 2.73
PTPN2-215	ENST00000592776	RGPD8	O14715	1765 aa	Predicted RBP	32.12	■■■□□ 2.73
PTPN2-215	ENST00000592776	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.1	■■■□□ 2.73
PTPN2-215	ENST00000592776	QTRT2	Q9H974	415 aa	Known RBP	32.1	■■■□□ 2.73
PTPN2-215	ENST00000592776	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.08	■■■□□ 2.73
PTPN2-215	ENST00000592776	KRT28	Q7Z3Y7	464 aa		32.08	■■■□□ 2.73
PTPN2-215	ENST00000592776	PHF8	Q9UPP1	1060 aa		32.08	■■■□□ 2.73
PTPN2-215	ENST00000592776	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.07	■■■□□ 2.72
PTPN2-215	ENST00000592776	STAC3	Q96MF2	364 aa		32.06	■■■□□ 2.72
PTPN2-215	ENST00000592776	KIF1A	Q12756	1690 aa		32.04	■■■□□ 2.72
PTPN2-215	ENST00000592776	SPATA31A3	Q5VYP0	1347 aa		32.03	■■■□□ 2.72
PTPN2-215	ENST00000592776	PMFBP1	Q8TBY8	1022 aa		32.03	■■■□□ 2.72
PTPN2-215	ENST00000592776	USP21	Q9UK80	565 aa		32.02	■■■□□ 2.72
PTPN2-215	ENST00000592776	USP32	Q8NFA0	1604 aa		32.01	■■■□□ 2.72
PTPN2-215	ENST00000592776	PLEKHG5	O94827	1062 aa		31.99	■■■□□ 2.71
PTPN2-215	ENST00000592776	RBM6	P78332	1123 aa	Known RBP	31.99	■■■□□ 2.71
PTPN2-215	ENST00000592776	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.99	■■■□□ 2.71
PTPN2-215	ENST00000592776	ADGRB2	O60241	1585 aa		31.98	■■■□□ 2.71
PTPN2-215	ENST00000592776	PRR36	Q9H6K5	1346 aa		31.98	■■■□□ 2.71
PTPN2-215	ENST00000592776	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.96	■■■□□ 2.71
PTPN2-215	ENST00000592776	WASL	O00401	505 aa	Predicted RBP	31.95	■■■□□ 2.71
PTPN2-215	ENST00000592776	PSME1	Q06323	249 aa		31.95	■■■□□ 2.71
PTPN2-215	ENST00000592776	RGS12	O14924	1447 aa		31.94	■■■□□ 2.7
PTPN2-215	ENST00000592776	ANKAR	Q7Z5J8	1434 aa		31.94	■■■□□ 2.7
PTPN2-215	ENST00000592776	NBPF1	Q3BBV0	1214 aa		31.94	■■■□□ 2.7
PTPN2-215	ENST00000592776	CABLES1	Q8TDN4	633 aa		31.93	■■■□□ 2.7
PTPN2-215	ENST00000592776	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.93	■■■□□ 2.7
PTPN2-215	ENST00000592776	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.92	■■■□□ 2.7
PTPN2-215	ENST00000592776	LMOD2	Q6P5Q4	547 aa		31.92	■■■□□ 2.7
PTPN2-215	ENST00000592776	SIN3A	Q96ST3	1273 aa		31.91	■■■□□ 2.7
PTPN2-215	ENST00000592776	TRPC5	Q9UL62	973 aa	Predicted RBP	31.91	■■■□□ 2.7
PTPN2-215	ENST00000592776	TNS3	Q68CZ2	1445 aa		31.91	■■■□□ 2.7
PTPN2-215	ENST00000592776	MARF1	Q9Y4F3	1742 aa	Known RBP	31.9	■■■□□ 2.7
PTPN2-215	ENST00000592776	BCL9L	Q86UU0	1499 aa		31.89	■■■□□ 2.7
PTPN2-215	ENST00000592776	SBNO1	A3KN83	1393 aa		31.88	■■■□□ 2.69
PTPN2-215	ENST00000592776	ATRN	O75882	1429 aa		31.88	■■■□□ 2.69
PTPN2-215	ENST00000592776	TULP4	Q9NRJ4	1543 aa		31.87	■■■□□ 2.69
PTPN2-215	ENST00000592776	L3MBTL2	Q969R5	705 aa		31.85	■■■□□ 2.69
PTPN2-215	ENST00000592776	EIF3A	Q14152	1382 aa	Known RBP	31.83	■■■□□ 2.69
PTPN2-215	ENST00000592776	HAP1	P54257	671 aa	Predicted RBP	31.83	■■■□□ 2.69
PTPN2-215	ENST00000592776	KIAA1210	Q9ULL0	1709 aa		31.83	■■■□□ 2.69
PTPN2-215	ENST00000592776	NEUROD1	Q13562	356 aa		31.82	■■■□□ 2.68
PTPN2-215	ENST00000592776	NUDT16	Q96DE0	195 aa	Known RBP	31.81	■■■□□ 2.68
PTPN2-215	ENST00000592776	CDK19	Q9BWU1	502 aa		31.81	■■■□□ 2.68
PTPN2-215	ENST00000592776	NGDN	Q8NEJ9	315 aa	Known RBP	31.8	■■■□□ 2.68
PTPN2-215	ENST00000592776	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.79	■■■□□ 2.68
PTPN2-215	ENST00000592776	ARHGEF10	O15013	1369 aa		31.79	■■■□□ 2.68
PTPN2-215	ENST00000592776	SLIT2	O94813	1529 aa		31.78	■■■□□ 2.68
PTPN2-215	ENST00000592776	GPRASP1	Q5JY77	1395 aa		31.78	■■■□□ 2.68
PTPN2-215	ENST00000592776	ATP7B	P35670	1465 aa		31.78	■■■□□ 2.68
PTPN2-215	ENST00000592776	UNC5CL	Q8IV45	518 aa		31.77	■■■□□ 2.68
PTPN2-215	ENST00000592776	GJD4	Q96KN9	370 aa	Predicted RBP	31.76	■■■□□ 2.67
PTPN2-215	ENST00000592776	ABCA3	Q99758	1704 aa		31.75	■■■□□ 2.67
PTPN2-215	ENST00000592776	PAK3	O75914	559 aa	Predicted RBP	31.73	■■■□□ 2.67
PTPN2-215	ENST00000592776	ALS2	Q96Q42	1657 aa		31.72	■■■□□ 2.67
PTPN2-215	ENST00000592776	FAM83G	A6ND36	823 aa		31.71	■■■□□ 2.67
PTPN2-215	ENST00000592776	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.69	■■■□□ 2.66
PTPN2-215	ENST00000592776	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.69	■■■□□ 2.66
PTPN2-215	ENST00000592776	RALGAPB	Q86X10	1494 aa		31.68	■■■□□ 2.66
PTPN2-215	ENST00000592776	ITSN1	Q15811	1721 aa		31.68	■■■□□ 2.66
PTPN2-215	ENST00000592776	GLI3	P10071	1580 aa		31.68	■■■□□ 2.66
PTPN2-215	ENST00000592776	CCDC61	Q9Y6R9	512 aa		31.66	■■■□□ 2.66
PTPN2-215	ENST00000592776	PLCH1	Q4KWH8	1693 aa		31.66	■■■□□ 2.66
PTPN2-215	ENST00000592776	CABP2	Q9NPB3	220 aa		31.65	■■■□□ 2.66
PTPN2-215	ENST00000592776	ACE	P12821	1306 aa		31.65	■■■□□ 2.66
PTPN2-215	ENST00000592776	ATAD2	Q6PL18	1390 aa		31.64	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms