RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	EP400	Q96L91	3159 aa		27.6	■■■□□ 2.01
CIRBP-238	ENST00000592412	FOXD1	Q16676	465 aa		27.6	■■■□□ 2.01
CIRBP-238	ENST00000592412	MYOM2	P54296	1465 aa		27.58	■■■□□ 2.01
CIRBP-238	ENST00000592412	PXDN	Q92626	1479 aa		27.58	■■■□□ 2.01
CIRBP-238	ENST00000592412	ADGRF5	Q8IZF2	1346 aa		27.58	■■■□□ 2.01
CIRBP-238	ENST00000592412	FNBP4	Q8N3X1	1017 aa	Predicted RBP	27.57	■■■□□ 2
CIRBP-238	ENST00000592412	USP21	Q9UK80	565 aa		27.56	■■■□□ 2
CIRBP-238	ENST00000592412	SPATA31E1	Q6ZUB1	1445 aa		27.56	■■■□□ 2
CIRBP-238	ENST00000592412	TECPR2	O15040	1411 aa		27.55	■■■□□ 2
CIRBP-238	ENST00000592412	IFT172	Q9UG01	1749 aa		27.55	■■■□□ 2
CIRBP-238	ENST00000592412	ATRN	O75882	1429 aa		27.54	■■■□□ 2
CIRBP-238	ENST00000592412	NPHP3	Q7Z494	1330 aa		27.52	■■■□□ 2
CIRBP-238	ENST00000592412	ESCO1	Q5FWF5	840 aa		27.52	■■■□□ 2
CIRBP-238	ENST00000592412	TRPC5	Q9UL62	973 aa	Predicted RBP	27.51	■■□□□ 1.99
CIRBP-238	ENST00000592412	WAPL	Q7Z5K2	1190 aa		27.5	■■□□□ 1.99
CIRBP-238	ENST00000592412	BCL9L	Q86UU0	1499 aa		27.5	■■□□□ 1.99
CIRBP-238	ENST00000592412	CCDC144A	A2RUR9	1427 aa		27.5	■■□□□ 1.99
CIRBP-238	ENST00000592412	LRPPRC	P42704	1394 aa	Known RBP	27.49	■■□□□ 1.99
CIRBP-238	ENST00000592412	PLEKHH1	Q9ULM0	1364 aa		27.49	■■□□□ 1.99
CIRBP-238	ENST00000592412	XPC	Q01831	940 aa	Predicted RBP	27.49	■■□□□ 1.99
CIRBP-238	ENST00000592412	KNDC1	Q76NI1	1749 aa		27.48	■■□□□ 1.99
CIRBP-238	ENST00000592412	MARF1	Q9Y4F3	1742 aa	Known RBP	27.48	■■□□□ 1.99
CIRBP-238	ENST00000592412	FOXO3	O43524	673 aa		27.48	■■□□□ 1.99
CIRBP-238	ENST00000592412	ATAD2	Q6PL18	1390 aa		27.48	■■□□□ 1.99
CIRBP-238	ENST00000592412	RGL3	Q3MIN7	710 aa		27.47	■■□□□ 1.99
CIRBP-238	ENST00000592412	STK26	Q9P289	416 aa		27.47	■■□□□ 1.99
CIRBP-238	ENST00000592412	PIK3C2G	O75747	1445 aa		27.47	■■□□□ 1.99
CIRBP-238	ENST00000592412	ABCC11	Q96J66	1382 aa		27.47	■■□□□ 1.99
CIRBP-238	ENST00000592412	ANKRD30B	Q9BXX2	1392 aa		27.46	■■□□□ 1.99
CIRBP-238	ENST00000592412	NUTM2F	A1L443	756 aa		27.45	■■□□□ 1.98
CIRBP-238	ENST00000592412	TMEM132E	Q6IEE7	984 aa		27.45	■■□□□ 1.98
CIRBP-238	ENST00000592412	FMN2	Q9NZ56	1722 aa		27.44	■■□□□ 1.98
CIRBP-238	ENST00000592412	MPHOSPH9	Q99550	1183 aa		27.42	■■□□□ 1.98
CIRBP-238	ENST00000592412	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.4	■■□□□ 1.98
CIRBP-238	ENST00000592412	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.38	■■□□□ 1.97
CIRBP-238	ENST00000592412	KIF1A	Q12756	1690 aa		27.37	■■□□□ 1.97
CIRBP-238	ENST00000592412	SPATA31A3	Q5VYP0	1347 aa		27.37	■■□□□ 1.97
CIRBP-238	ENST00000592412	SLIT2	O94813	1529 aa		27.36	■■□□□ 1.97
CIRBP-238	ENST00000592412	GJD4	Q96KN9	370 aa	Predicted RBP	27.35	■■□□□ 1.97
CIRBP-238	ENST00000592412	GLI3	P10071	1580 aa		27.35	■■□□□ 1.97
CIRBP-238	ENST00000592412	NRXN1	Q9ULB1	1477 aa		27.34	■■□□□ 1.97
CIRBP-238	ENST00000592412	USP32	Q8NFA0	1604 aa		27.32	■■□□□ 1.96
CIRBP-238	ENST00000592412	RALGAPB	Q86X10	1494 aa		27.32	■■□□□ 1.96
CIRBP-238	ENST00000592412	RGPD8	O14715	1765 aa	Predicted RBP	27.31	■■□□□ 1.96
CIRBP-238	ENST00000592412	SIRT1	Q96EB6	747 aa		27.31	■■□□□ 1.96
CIRBP-238	ENST00000592412	C14orf93	Q9H972	538 aa	Known RBP	27.3	■■□□□ 1.96
CIRBP-238	ENST00000592412	KRT28	Q7Z3Y7	464 aa		27.29	■■□□□ 1.96
CIRBP-238	ENST00000592412	UNC5CL	Q8IV45	518 aa		27.29	■■□□□ 1.96
CIRBP-238	ENST00000592412	TNS3	Q68CZ2	1445 aa		27.27	■■□□□ 1.96
CIRBP-238	ENST00000592412	CFAP70	Q5T0N1	1121 aa		27.27	■■□□□ 1.96
CIRBP-238	ENST00000592412	CCDC125	Q86Z20	511 aa		27.24	■■□□□ 1.95
CIRBP-238	ENST00000592412	PHF8	Q9UPP1	1060 aa		27.24	■■□□□ 1.95
CIRBP-238	ENST00000592412	ABCA3	Q99758	1704 aa		27.24	■■□□□ 1.95
CIRBP-238	ENST00000592412	BRWD3	Q6RI45	1802 aa		27.23	■■□□□ 1.95
CIRBP-238	ENST00000592412	CABLES1	Q8TDN4	633 aa		27.22	■■□□□ 1.95
CIRBP-238	ENST00000592412	DHX57	Q6P158	1386 aa	Known RBP	27.22	■■□□□ 1.95
CIRBP-238	ENST00000592412	PLCH1	Q4KWH8	1693 aa		27.21	■■□□□ 1.95
CIRBP-238	ENST00000592412	ZRANB1	Q9UGI0	708 aa		27.21	■■□□□ 1.95
CIRBP-238	ENST00000592412	PRAM1	Q96QH2	718 aa		27.2	■■□□□ 1.94
CIRBP-238	ENST00000592412	DLC1	Q96QB1	1528 aa		27.2	■■□□□ 1.94
CIRBP-238	ENST00000592412	SBNO1	A3KN83	1393 aa		27.2	■■□□□ 1.94
CIRBP-238	ENST00000592412	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.19	■■□□□ 1.94
CIRBP-238	ENST00000592412	ADGRB1	O14514	1584 aa		27.18	■■□□□ 1.94
CIRBP-238	ENST00000592412	NWD2	Q9ULI1	1742 aa		27.18	■■□□□ 1.94
CIRBP-238	ENST00000592412	ADGRB2	O60241	1585 aa		27.18	■■□□□ 1.94
CIRBP-238	ENST00000592412	BLM	P54132	1417 aa	Predicted RBP	27.17	■■□□□ 1.94
CIRBP-238	ENST00000592412	PSME1	Q06323	249 aa		27.16	■■□□□ 1.94
CIRBP-238	ENST00000592412	VPS72	Q15906	364 aa		27.16	■■□□□ 1.94
CIRBP-238	ENST00000592412	ANKAR	Q7Z5J8	1434 aa		27.15	■■□□□ 1.94
CIRBP-238	ENST00000592412	PLEKHG5	O94827	1062 aa		27.14	■■□□□ 1.94
CIRBP-238	ENST00000592412	SEPT12	Q8IYM1	358 aa		27.14	■■□□□ 1.94
CIRBP-238	ENST00000592412	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.13	■■□□□ 1.93
CIRBP-238	ENST00000592412	ARHGEF10	O15013	1369 aa		27.13	■■□□□ 1.93
CIRBP-238	ENST00000592412	PMFBP1	Q8TBY8	1022 aa		27.13	■■□□□ 1.93
CIRBP-238	ENST00000592412	ONECUT3	O60422	494 aa	Predicted RBP	27.12	■■□□□ 1.93
CIRBP-238	ENST00000592412	HAP1	P54257	671 aa	Predicted RBP	27.12	■■□□□ 1.93
CIRBP-238	ENST00000592412	DEFB132	Q7Z7B7	95 aa		27.11	■■□□□ 1.93
CIRBP-238	ENST00000592412	NRAP	Q86VF7	1730 aa		27.1	■■□□□ 1.93
CIRBP-238	ENST00000592412	FAM83G	A6ND36	823 aa		27.1	■■□□□ 1.93
CIRBP-238	ENST00000592412	LMOD2	Q6P5Q4	547 aa		27.1	■■□□□ 1.93
CIRBP-238	ENST00000592412	ALS2	Q96Q42	1657 aa		27.09	■■□□□ 1.93
CIRBP-238	ENST00000592412	ACIN1	Q9UKV3	1341 aa	Known RBP	27.09	■■□□□ 1.93
CIRBP-238	ENST00000592412	RAB3GAP2	Q9H2M9	1393 aa		27.09	■■□□□ 1.93
CIRBP-238	ENST00000592412	POGK	Q9P215	609 aa		27.08	■■□□□ 1.93
CIRBP-238	ENST00000592412	PRR36	Q9H6K5	1346 aa		27.08	■■□□□ 1.93
CIRBP-238	ENST00000592412	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.07	■■□□□ 1.92
CIRBP-238	ENST00000592412	TRAK1	Q9UPV9	953 aa		27.05	■■□□□ 1.92
CIRBP-238	ENST00000592412	CCDC9	Q9Y3X0	531 aa	Known RBP	27.04	■■□□□ 1.92
CIRBP-238	ENST00000592412	TULP4	Q9NRJ4	1543 aa		27.04	■■□□□ 1.92
CIRBP-238	ENST00000592412	CRYBG1	Q9Y4K1	1723 aa		27.04	■■□□□ 1.92
CIRBP-238	ENST00000592412	KRT27	Q7Z3Y8	459 aa		27.03	■■□□□ 1.92
CIRBP-238	ENST00000592412	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.02	■■□□□ 1.92
CIRBP-238	ENST00000592412	COL14A1	Q05707	1796 aa	Known RBP	27	■■□□□ 1.91
CIRBP-238	ENST00000592412	BTG4	Q9NY30	223 aa		27	■■□□□ 1.91
CIRBP-238	ENST00000592412	WASL	O00401	505 aa	Predicted RBP	26.98	■■□□□ 1.91
CIRBP-238	ENST00000592412	GPRASP1	Q5JY77	1395 aa		26.97	■■□□□ 1.91
CIRBP-238	ENST00000592412	FAM98C	Q17RN3	349 aa	Known RBP	26.97	■■□□□ 1.91
CIRBP-238	ENST00000592412	EIF3A	Q14152	1382 aa	Known RBP	26.97	■■□□□ 1.91
CIRBP-238	ENST00000592412	SF3B2	Q13435	895 aa	Known RBP	26.96	■■□□□ 1.91
CIRBP-238	ENST00000592412	DCAF11	Q8TEB1	546 aa		26.96	■■□□□ 1.91

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms