RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ZPR1O75312 459 aa7.43□□□□□ -1.22
VMP1-212ENST00000591782 CABLES1Q8TDN4 633 aa7.43□□□□□ -1.22
VMP1-212ENST00000591782 ZNF516Q92618 1163 aa7.43□□□□□ -1.22
VMP1-212ENST00000591782 IL21Q9HBE4 155 aa7.43□□□□□ -1.22
VMP1-212ENST00000591782 C6orf229H3BNL8 230 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 TLL1O43897 1013 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 LILRB3O75022 631 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 HRCP23327 699 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 MTMR2Q13614 643 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 Q3C1V9 767 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 THAP11Q96EK4 314 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 ZBTB3Q9H5J0 574 aa7.42□□□□□ -1.22
VMP1-212ENST00000591782 NUTM2BA6NNL0 878 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 NUTM2EB1AL46 878 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 FMNL1O95466 1100 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 ITGBL1O95965 494 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 NUTM2DQ5VT03 806 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 PRPF38BQ5VTL8 546 aaKnown RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 BRICD5Q6PL45 260 aa7.41□□□□□ -1.22
VMP1-212ENST00000591782 NUTM2AQ8IVF1 878 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 SALL2Q9Y467 1007 aaPredicted RBP7.41□□□□□ -1.22
VMP1-212ENST00000591782 KCNC4Q03721 635 aa7.4□□□□□ -1.22
VMP1-212ENST00000591782 RTL5Q5HYW3 569 aaPredicted RBP7.4□□□□□ -1.22
VMP1-212ENST00000591782 SPSB2Q99619 263 aa7.4□□□□□ -1.22
VMP1-212ENST00000591782 PLSCR2Q9NRY7 297 aa7.4□□□□□ -1.22
VMP1-212ENST00000591782 PPP2R2DQ66LE6 453 aa7.39□□□□□ -1.23
VMP1-212ENST00000591782 NKX2-3Q8TAU0 364 aa7.39□□□□□ -1.23
VMP1-212ENST00000591782 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
VMP1-212ENST00000591782 RFC5P40937 340 aa7.38□□□□□ -1.23
VMP1-212ENST00000591782 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
VMP1-212ENST00000591782 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
VMP1-212ENST00000591782 SPDYE5A6NIY4 337 aa7.37□□□□□ -1.23
VMP1-212ENST00000591782 ADH1BP00325 375 aa7.37□□□□□ -1.23
VMP1-212ENST00000591782 FAM160A2Q8N612 972 aaPredicted RBP7.37□□□□□ -1.23
VMP1-212ENST00000591782 PRR7Q8TB68 274 aa7.37□□□□□ -1.23
VMP1-212ENST00000591782 TSC1Q92574 1164 aa7.36□□□□□ -1.23
VMP1-212ENST00000591782 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
VMP1-212ENST00000591782 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
VMP1-212ENST00000591782 SLC6A16Q9GZN6 736 aa7.34□□□□□ -1.23
VMP1-212ENST00000591782 S1PR4O95977 384 aa7.33□□□□□ -1.24
VMP1-212ENST00000591782 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
VMP1-212ENST00000591782 GTF3C3Q9Y5Q9 886 aa7.33□□□□□ -1.24
VMP1-212ENST00000591782 AP1G2O75843 785 aa7.32□□□□□ -1.24
VMP1-212ENST00000591782 JUNDP17535 347 aa7.32□□□□□ -1.24
VMP1-212ENST00000591782 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
VMP1-212ENST00000591782 HELBQ8NG08 1087 aaPredicted RBP7.32□□□□□ -1.24
VMP1-212ENST00000591782 PER1O15534 1290 aaPredicted RBP7.31□□□□□ -1.24
VMP1-212ENST00000591782 DXOO77932 396 aaKnown RBP7.31□□□□□ -1.24
VMP1-212ENST00000591782 MMP16P51512 607 aa7.31□□□□□ -1.24
VMP1-212ENST00000591782 TMEM259Q4ZIN3 620 aa7.31□□□□□ -1.24
VMP1-212ENST00000591782 DESI1Q6ICB0 168 aa7.31□□□□□ -1.24
VMP1-212ENST00000591782 IFFO2Q5TF58 517 aa7.3□□□□□ -1.24
VMP1-212ENST00000591782 PPP1R18Q6NYC8 613 aa7.3□□□□□ -1.24
VMP1-212ENST00000591782 PPEF1O14829 653 aaPredicted RBP7.29□□□□□ -1.24
VMP1-212ENST00000591782 USP17L8P0C7I0 530 aa7.29□□□□□ -1.24
VMP1-212ENST00000591782 LYPD8Q6UX82 237 aa7.28□□□□□ -1.24
VMP1-212ENST00000591782 BANK1Q8NDB2 785 aa7.28□□□□□ -1.24
VMP1-212ENST00000591782 LRRN4Q8WUT4 740 aa7.28□□□□□ -1.24
VMP1-212ENST00000591782 SNRKQ9NRH2 765 aa7.28□□□□□ -1.24
VMP1-212ENST00000591782 RNF223E7ERA6 249 aa7.27□□□□□ -1.25
VMP1-212ENST00000591782 GGCXP38435 758 aa7.27□□□□□ -1.25
VMP1-212ENST00000591782 PTPRNQ16849 979 aa7.27□□□□□ -1.25
VMP1-212ENST00000591782 NUDT12Q9BQG2 462 aa7.27□□□□□ -1.25
VMP1-212ENST00000591782 HMX1Q9NP08 348 aaPredicted RBP7.27□□□□□ -1.25
VMP1-212ENST00000591782 FCF1Q9Y324 198 aaKnown RBP7.27□□□□□ -1.25
VMP1-212ENST00000591782 CCNYL3P0C7X3 344 aa7.26□□□□□ -1.25
VMP1-212ENST00000591782 CCDC24Q8N4L8 307 aa7.26□□□□□ -1.25
VMP1-212ENST00000591782 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.26□□□□□ -1.25
VMP1-212ENST00000591782 MCM6Q14566 821 aa7.25□□□□□ -1.25
VMP1-212ENST00000591782 MTMR14Q8NCE2 650 aa7.25□□□□□ -1.25
VMP1-212ENST00000591782 A0A0G2JS52 829 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 F12P00748 615 aaPredicted RBP7.24□□□□□ -1.25
VMP1-212ENST00000591782 CTHP32929 405 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 FLIIQ13045 1269 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 ANKLE1Q8NAG6 615 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 EVA1BQ9NVM1 165 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 MAP10Q9P2G4 905 aa7.24□□□□□ -1.25
VMP1-212ENST00000591782 PLA2G2CQ5R387 149 aa7.23□□□□□ -1.25
VMP1-212ENST00000591782 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
VMP1-212ENST00000591782 GJD4Q96KN9 370 aaPredicted RBP7.23□□□□□ -1.25
VMP1-212ENST00000591782 KCNH2Q12809 1159 aa7.22□□□□□ -1.25
VMP1-212ENST00000591782 NR6A1Q15406 480 aa7.22□□□□□ -1.25
VMP1-212ENST00000591782 PTCRAQ6ISU1 281 aaPredicted RBP7.22□□□□□ -1.25
VMP1-212ENST00000591782 TRIM34Q9BYJ4 488 aa7.22□□□□□ -1.25
VMP1-212ENST00000591782 SOCS7O14512 581 aa7.21□□□□□ -1.26
VMP1-212ENST00000591782 UNC93B1Q9H1C4 597 aa7.2□□□□□ -1.26
VMP1-212ENST00000591782 EMID1Q96A84 441 aaPredicted RBP7.19□□□□□ -1.26
VMP1-212ENST00000591782 APBB1O00213 710 aa7.18□□□□□ -1.26
VMP1-212ENST00000591782 UBTFP17480 764 aaKnown RBP7.18□□□□□ -1.26
VMP1-212ENST00000591782 LIAT1Q6ZQX7 453 aa7.18□□□□□ -1.26
VMP1-212ENST00000591782 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
VMP1-212ENST00000591782 TBC1D2BQ9UPU7 963 aa7.18□□□□□ -1.26
VMP1-212ENST00000591782 ZBTB24O43167 697 aaPredicted RBP7.17□□□□□ -1.26
VMP1-212ENST00000591782 FKBPLQ9UIM3 349 aa7.17□□□□□ -1.26
VMP1-212ENST00000591782 NDUFB9Q9Y6M9 179 aa7.17□□□□□ -1.26
VMP1-212ENST00000591782 GPR37L1O60883 481 aa7.16□□□□□ -1.26
VMP1-212ENST00000591782 BAP1Q92560 729 aa7.16□□□□□ -1.26
VMP1-212ENST00000591782 CLUAP1Q96AJ1 413 aa7.16□□□□□ -1.26
VMP1-212ENST00000591782 GDPD2Q9HCC8 539 aa7.16□□□□□ -1.26
VMP1-212ENST00000591782 COG6Q9Y2V7 657 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms