RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
LSM7-206ENST00000591515 FNBP4Q8N3X1 1017 aaPredicted RBP34.3■■■■□ 3.08
LSM7-206ENST00000591515 ROBO2Q9HCK4 1378 aa34.29■■■■□ 3.08
LSM7-206ENST00000591515 ZRANB1Q9UGI0 708 aa34.25■■■■□ 3.07
LSM7-206ENST00000591515 MYOM2P54296 1465 aa34.25■■■■□ 3.07
LSM7-206ENST00000591515 PRAG1Q86YV5 1406 aa34.24■■■■□ 3.07
LSM7-206ENST00000591515 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
LSM7-206ENST00000591515 BCL9LQ86UU0 1499 aa34.2■■■■□ 3.07
LSM7-206ENST00000591515 HRCP23327 699 aa34.2■■■■□ 3.07
LSM7-206ENST00000591515 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.18■■■■□ 3.06
LSM7-206ENST00000591515 FOXD1Q16676 465 aa34.17■■■■□ 3.06
LSM7-206ENST00000591515 PXDNQ92626 1479 aa34.17■■■■□ 3.06
LSM7-206ENST00000591515 CDC42BPGQ6DT37 1551 aa34.16■■■■□ 3.06
LSM7-206ENST00000591515 SLC4A1APQ9BWU0 796 aaKnown RBP34.16■■■■□ 3.06
LSM7-206ENST00000591515 PPLO60437 1756 aa34.16■■■■□ 3.06
LSM7-206ENST00000591515 CCDC125Q86Z20 511 aa34.11■■■■□ 3.05
LSM7-206ENST00000591515 BRWD3Q6RI45 1802 aa34.11■■■■□ 3.05
LSM7-206ENST00000591515 NPHP3Q7Z494 1330 aa34.1■■■■□ 3.05
LSM7-206ENST00000591515 VGFO15240 615 aaPredicted RBP34.09■■■■□ 3.05
LSM7-206ENST00000591515 GLI3P10071 1580 aa34.08■■■■□ 3.05
LSM7-206ENST00000591515 GJD4Q96KN9 370 aaPredicted RBP34.06■■■■□ 3.04
LSM7-206ENST00000591515 ESCO1Q5FWF5 840 aa34.05■■■■□ 3.04
LSM7-206ENST00000591515 XPCQ01831 940 aaPredicted RBP34.04■■■■□ 3.04
LSM7-206ENST00000591515 MPHOSPH9Q99550 1183 aa34.04■■■■□ 3.04
LSM7-206ENST00000591515 RALGAPBQ86X10 1494 aa34.01■■■■□ 3.03
LSM7-206ENST00000591515 SLIT2O94813 1529 aa34■■■■□ 3.03
LSM7-206ENST00000591515 FOXO3O43524 673 aa34■■■■□ 3.03
LSM7-206ENST00000591515 BLMP54132 1417 aaPredicted RBP34■■■■□ 3.03
LSM7-206ENST00000591515 RPGRIP1LQ68CZ1 1315 aa33.99■■■■□ 3.03
LSM7-206ENST00000591515 USP32Q8NFA0 1604 aa33.97■■■■□ 3.03
LSM7-206ENST00000591515 FMN2Q9NZ56 1722 aa33.95■■■■□ 3.03
LSM7-206ENST00000591515 KIF1AQ12756 1690 aa33.93■■■■□ 3.02
LSM7-206ENST00000591515 UNC5CLQ8IV45 518 aa33.93■■■■□ 3.02
LSM7-206ENST00000591515 LRPPRCP42704 1394 aaKnown RBP33.93■■■■□ 3.02
LSM7-206ENST00000591515 LRP5O75197 1615 aa33.93■■■■□ 3.02
LSM7-206ENST00000591515 KNDC1Q76NI1 1749 aa33.93■■■■□ 3.02
LSM7-206ENST00000591515 TECPR2O15040 1411 aa33.9■■■■□ 3.02
LSM7-206ENST00000591515 NUTM2FA1L443 756 aa33.9■■■■□ 3.02
LSM7-206ENST00000591515 DEFB132Q7Z7B7 95 aa33.9■■■■□ 3.02
LSM7-206ENST00000591515 PLCH1Q4KWH8 1693 aa33.9■■■■□ 3.02
LSM7-206ENST00000591515 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
LSM7-206ENST00000591515 IFT172Q9UG01 1749 aa33.88■■■■□ 3.01
LSM7-206ENST00000591515 SPATA31A3Q5VYP0 1347 aa33.87■■■■□ 3.01
LSM7-206ENST00000591515 WAPLQ7Z5K2 1190 aa33.86■■■■□ 3.01
LSM7-206ENST00000591515 ABCA3Q99758 1704 aa33.86■■■■□ 3.01
LSM7-206ENST00000591515 NWD2Q9ULI1 1742 aa33.86■■■■□ 3.01
LSM7-206ENST00000591515 ADGRF5Q8IZF2 1346 aa33.83■■■■□ 3.01
LSM7-206ENST00000591515 CCDC144AA2RUR9 1427 aa33.83■■■■□ 3.01
LSM7-206ENST00000591515 PLEKHH1Q9ULM0 1364 aa33.83■■■■□ 3.01
LSM7-206ENST00000591515 STK26Q9P289 416 aa33.82■■■■□ 3
LSM7-206ENST00000591515 SEPT12Q8IYM1 358 aa33.81■■■■□ 3
LSM7-206ENST00000591515 ABCC11Q96J66 1382 aa33.77■■■■□ 3
LSM7-206ENST00000591515 SF3B2Q13435 895 aaKnown RBP33.77■■■■□ 3
LSM7-206ENST00000591515 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
LSM7-206ENST00000591515 TNS3Q68CZ2 1445 aa33.76■■■□□ 2.99
LSM7-206ENST00000591515 VPS72Q15906 364 aa33.75■■■□□ 2.99
LSM7-206ENST00000591515 KRT28Q7Z3Y7 464 aa33.75■■■□□ 2.99
LSM7-206ENST00000591515 TMEM132EQ6IEE7 984 aa33.72■■■□□ 2.99
LSM7-206ENST00000591515 NRAPQ86VF7 1730 aa33.71■■■□□ 2.99
LSM7-206ENST00000591515 ONECUT3O60422 494 aaPredicted RBP33.71■■■□□ 2.99
LSM7-206ENST00000591515 CABLES1Q8TDN4 633 aa33.71■■■□□ 2.99
LSM7-206ENST00000591515 SPATA31E1Q6ZUB1 1445 aa33.7■■■□□ 2.99
LSM7-206ENST00000591515 KRT27Q7Z3Y8 459 aa33.69■■■□□ 2.98
LSM7-206ENST00000591515 PIK3C2GO75747 1445 aa33.69■■■□□ 2.98
LSM7-206ENST00000591515 YTHDC2Q9H6S0 1430 aaKnown RBP33.69■■■□□ 2.98
LSM7-206ENST00000591515 HAP1P54257 671 aaPredicted RBP33.68■■■□□ 2.98
LSM7-206ENST00000591515 ANKRD30BQ9BXX2 1392 aa33.67■■■□□ 2.98
LSM7-206ENST00000591515 CCDC9Q9Y3X0 531 aaKnown RBP33.66■■■□□ 2.98
LSM7-206ENST00000591515 PSDA5PKW4 1024 aaPredicted RBP33.65■■■□□ 2.98
LSM7-206ENST00000591515 PLEKHG5O94827 1062 aa33.65■■■□□ 2.98
LSM7-206ENST00000591515 RGL3Q3MIN7 710 aa33.65■■■□□ 2.98
LSM7-206ENST00000591515 NRXN1Q9ULB1 1477 aa33.64■■■□□ 2.98
LSM7-206ENST00000591515 PHF8Q9UPP1 1060 aa33.64■■■□□ 2.98
LSM7-206ENST00000591515 RGPD1P0DJD0 1748 aa33.64■■■□□ 2.98
LSM7-206ENST00000591515 SBNO1A3KN83 1393 aa33.63■■■□□ 2.97
LSM7-206ENST00000591515 PSME1Q06323 249 aa33.61■■■□□ 2.97
LSM7-206ENST00000591515 BAG6P46379 1132 aa33.59■■■□□ 2.97
LSM7-206ENST00000591515 TRPM3Q9HCF6 1732 aaPredicted RBP33.59■■■□□ 2.97
LSM7-206ENST00000591515 ARHGEF10O15013 1369 aa33.59■■■□□ 2.97
LSM7-206ENST00000591515 FAM83GA6ND36 823 aa33.57■■■□□ 2.96
LSM7-206ENST00000591515 TNS1Q9HBL0 1735 aaKnown RBP33.56■■■□□ 2.96
LSM7-206ENST00000591515 LMOD2Q6P5Q4 547 aa33.56■■■□□ 2.96
LSM7-206ENST00000591515 DHX57Q6P158 1386 aaKnown RBP33.56■■■□□ 2.96
LSM7-206ENST00000591515 SIRT1Q96EB6 747 aa33.55■■■□□ 2.96
LSM7-206ENST00000591515 COL14A1Q05707 1796 aaKnown RBP33.55■■■□□ 2.96
LSM7-206ENST00000591515 A0A0G2JS52 829 aa33.54■■■□□ 2.96
LSM7-206ENST00000591515 MYT1Q01538 1121 aa33.54■■■□□ 2.96
LSM7-206ENST00000591515 ALS2Q96Q42 1657 aa33.54■■■□□ 2.96
LSM7-206ENST00000591515 FAM98CQ17RN3 349 aaKnown RBP33.53■■■□□ 2.96
LSM7-206ENST00000591515 CRYBG1Q9Y4K1 1723 aa33.5■■■□□ 2.95
LSM7-206ENST00000591515 THSD7AQ9UPZ6 1657 aa33.49■■■□□ 2.95
LSM7-206ENST00000591515 EN1Q05925 392 aaPredicted RBP33.49■■■□□ 2.95
LSM7-206ENST00000591515 C14orf93Q9H972 538 aaKnown RBP33.47■■■□□ 2.95
LSM7-206ENST00000591515 BTG4Q9NY30 223 aa33.47■■■□□ 2.95
LSM7-206ENST00000591515 ADGRB2O60241 1585 aa33.47■■■□□ 2.95
LSM7-206ENST00000591515 ANKARQ7Z5J8 1434 aa33.45■■■□□ 2.95
LSM7-206ENST00000591515 SAFB2Q14151 953 aaKnown RBP eCLIP33.45■■■□□ 2.95
LSM7-206ENST00000591515 FAM182BQ5T319 152 aa33.45■■■□□ 2.95
LSM7-206ENST00000591515 PMFBP1Q8TBY8 1022 aa33.45■■■□□ 2.95
LSM7-206ENST00000591515 DISP2A7MBM2 1401 aa33.45■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms