RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	ST20-MTHFS	A0A0A6YYL1	179 aa		10.42	□□□□□ -0.74
HKR1-223	ENST00000591471	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.42	□□□□□ -0.74
HKR1-223	ENST00000591471	KIF7	Q2M1P5	1343 aa		10.42	□□□□□ -0.74
HKR1-223	ENST00000591471	PTPRU	Q92729	1446 aa		10.42	□□□□□ -0.74
HKR1-223	ENST00000591471	FMN2	Q9NZ56	1722 aa		10.41	□□□□□ -0.74
HKR1-223	ENST00000591471	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.41	□□□□□ -0.74
HKR1-223	ENST00000591471	NPC1L1	Q9UHC9	1359 aa		10.41	□□□□□ -0.74
HKR1-223	ENST00000591471	USP54	Q70EL1	1684 aa		10.4	□□□□□ -0.74
HKR1-223	ENST00000591471	AKAP12	Q02952	1782 aa		10.4	□□□□□ -0.74
HKR1-223	ENST00000591471	C11orf95	C9JLR9	678 aa	Predicted RBP	10.4	□□□□□ -0.74
HKR1-223	ENST00000591471	DISP3	Q9P2K9	1392 aa		10.39	□□□□□ -0.75
HKR1-223	ENST00000591471	ANKRD26	Q9UPS8	1709 aa		10.39	□□□□□ -0.75
HKR1-223	ENST00000591471	ATAD2	Q6PL18	1390 aa		10.39	□□□□□ -0.75
HKR1-223	ENST00000591471	ANKAR	Q7Z5J8	1434 aa		10.39	□□□□□ -0.75
HKR1-223	ENST00000591471	NALCN	Q8IZF0	1738 aa		10.39	□□□□□ -0.75
HKR1-223	ENST00000591471	ATP7B	P35670	1465 aa		10.38	□□□□□ -0.75
HKR1-223	ENST00000591471	MYT1	Q01538	1121 aa		10.38	□□□□□ -0.75
HKR1-223	ENST00000591471	MON2	Q7Z3U7	1717 aa		10.38	□□□□□ -0.75
HKR1-223	ENST00000591471	DCC	P43146	1447 aa		10.38	□□□□□ -0.75
HKR1-223	ENST00000591471	EVC2	Q86UK5	1308 aa		10.37	□□□□□ -0.75
HKR1-223	ENST00000591471	NRK	Q7Z2Y5	1582 aa		10.37	□□□□□ -0.75
HKR1-223	ENST00000591471	LRRC7	Q96NW7	1537 aa		10.37	□□□□□ -0.75
HKR1-223	ENST00000591471	STRCP1	A6NGW2	1772 aa		10.36	□□□□□ -0.75
HKR1-223	ENST00000591471	BRD4	O60885	1362 aa	Predicted RBP	10.36	□□□□□ -0.75
HKR1-223	ENST00000591471	KIF1A	Q12756	1690 aa		10.35	□□□□□ -0.75
HKR1-223	ENST00000591471	ROBO2	Q9HCK4	1378 aa		10.35	□□□□□ -0.75
HKR1-223	ENST00000591471	KCNA6	P17658	529 aa		10.35	□□□□□ -0.75
HKR1-223	ENST00000591471	XIRP1	Q702N8	1843 aa	Known RBP	10.34	□□□□□ -0.75
HKR1-223	ENST00000591471	ADGRL3	Q9HAR2	1447 aa		10.34	□□□□□ -0.75
HKR1-223	ENST00000591471	NSD2	O96028	1365 aa		10.34	□□□□□ -0.75
HKR1-223	ENST00000591471	TMEM132E	Q6IEE7	984 aa		10.34	□□□□□ -0.75
HKR1-223	ENST00000591471	KIF20B	Q96Q89	1820 aa		10.34	□□□□□ -0.75
HKR1-223	ENST00000591471	TRAK1	Q9UPV9	953 aa		10.33	□□□□□ -0.76
HKR1-223	ENST00000591471	ANKRD36B	Q8N2N9	1353 aa		10.33	□□□□□ -0.76
HKR1-223	ENST00000591471	DMRT2	Q9Y5R5	561 aa		10.32	□□□□□ -0.76
HKR1-223	ENST00000591471	CD163L1	Q9NR16	1453 aa		10.32	□□□□□ -0.76
HKR1-223	ENST00000591471	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.32	□□□□□ -0.76
HKR1-223	ENST00000591471	PRAM1	Q96QH2	718 aa		10.32	□□□□□ -0.76
HKR1-223	ENST00000591471	CPSF1	Q10570	1443 aa	Known RBP	10.31	□□□□□ -0.76
HKR1-223	ENST00000591471	AMOTL2	Q9Y2J4	779 aa		10.31	□□□□□ -0.76
HKR1-223	ENST00000591471	PER1	O15534	1290 aa	Predicted RBP	10.31	□□□□□ -0.76
HKR1-223	ENST00000591471	MST1R	Q04912	1400 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	CCDC184	Q52MB2	194 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	PLEKHH1	Q9ULM0	1364 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	WASL	O00401	505 aa	Predicted RBP	10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	FKBP8	Q14318	412 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	INSR	P06213	1382 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	IQSEC2	Q5JU85	1478 aa		10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
HKR1-223	ENST00000591471	PARD3	Q8TEW0	1356 aa		10.29	□□□□□ -0.76
HKR1-223	ENST00000591471	POGK	Q9P215	609 aa		10.29	□□□□□ -0.76
HKR1-223	ENST00000591471	POLR3A	O14802	1390 aa	Predicted RBP	10.28	□□□□□ -0.76
HKR1-223	ENST00000591471	NCKAP5L	Q9HCH0	1330 aa		10.28	□□□□□ -0.76
HKR1-223	ENST00000591471	BCAN	Q96GW7	911 aa		10.28	□□□□□ -0.76
HKR1-223	ENST00000591471	RALBP1	Q15311	655 aa		10.27	□□□□□ -0.76
HKR1-223	ENST00000591471	PLEKHG3	A1L390	1219 aa		10.27	□□□□□ -0.77
HKR1-223	ENST00000591471	POLR3GL	Q9BT43	218 aa		10.27	□□□□□ -0.77
HKR1-223	ENST00000591471	EDC4	Q6P2E9	1401 aa	Known RBP	10.27	□□□□□ -0.77
HKR1-223	ENST00000591471	SSH2	Q76I76	1423 aa		10.26	□□□□□ -0.77
HKR1-223	ENST00000591471	SLC26A8	Q96RN1	970 aa		10.26	□□□□□ -0.77
HKR1-223	ENST00000591471	CDK19	Q9BWU1	502 aa		10.26	□□□□□ -0.77
HKR1-223	ENST00000591471	NEFL	P07196	543 aa		10.26	□□□□□ -0.77
HKR1-223	ENST00000591471	LTBP4	Q8N2S1	1624 aa		10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	PPIP5K1	Q6PFW1	1433 aa		10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	ZNF692	Q9BU19	519 aa	Predicted RBP	10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	MRS2	Q9HD23	443 aa		10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	RGPD8	O14715	1765 aa	Predicted RBP	10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.25	□□□□□ -0.77
HKR1-223	ENST00000591471	STK26	Q9P289	416 aa		10.24	□□□□□ -0.77
HKR1-223	ENST00000591471	FAM9B	Q8IZU0	186 aa		10.24	□□□□□ -0.77
HKR1-223	ENST00000591471	TERF2IP	Q9NYB0	399 aa		10.24	□□□□□ -0.77
HKR1-223	ENST00000591471	WAPL	Q7Z5K2	1190 aa		10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	CCDC61	Q9Y6R9	512 aa		10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	CGNL1	Q0VF96	1302 aa		10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	MARF1	Q9Y4F3	1742 aa	Known RBP	10.23	□□□□□ -0.77
HKR1-223	ENST00000591471		A0A1W2PP64	1363 aa		10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	SMG6	Q86US8	1419 aa	Known RBP	10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	PANK3	Q9H999	370 aa		10.23	□□□□□ -0.77
HKR1-223	ENST00000591471	CNGB1	Q14028	1251 aa	Predicted RBP	10.22	□□□□□ -0.77
HKR1-223	ENST00000591471	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.21	□□□□□ -0.77
HKR1-223	ENST00000591471	NHSL1	Q5SYE7	1610 aa		10.21	□□□□□ -0.77
HKR1-223	ENST00000591471	USP31	Q70CQ4	1352 aa		10.21	□□□□□ -0.77
HKR1-223	ENST00000591471	USP6	P35125	1406 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	NSD3	Q9BZ95	1437 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	ABCC6	O95255	1503 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	ALS2	Q96Q42	1657 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	PLPPR3	Q6T4P5	718 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	NUDT16	Q96DE0	195 aa	Known RBP	10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	TTC21A	Q8NDW8	1320 aa		10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	MED1	Q15648	1581 aa	Predicted RBP	10.21	□□□□□ -0.78
HKR1-223	ENST00000591471	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	C19orf44	Q9H6X5	657 aa		10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	PRR36	Q9H6K5	1346 aa		10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	SRPK2	P78362	688 aa	Known RBP	10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	KNSTRN	Q9Y448	316 aa		10.2	□□□□□ -0.78
HKR1-223	ENST00000591471	PIK3C2A	O00443	1686 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 100 ms