RNA–Protein interactions for RNA: ENST00000591303.2

PCSK4-211, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-211ENST00000591303 GJD4Q96KN9 370 aaPredicted RBP29.99■■■□□ 2.39
PCSK4-211ENST00000591303 ZNF326Q5BKZ1 582 aaKnown RBP29.98■■■□□ 2.39
PCSK4-211ENST00000591303 NUP155O75694 1391 aa29.98■■■□□ 2.39
PCSK4-211ENST00000591303 ROBO2Q9HCK4 1378 aa29.98■■■□□ 2.39
PCSK4-211ENST00000591303 DEFB132Q7Z7B7 95 aa29.97■■■□□ 2.39
PCSK4-211ENST00000591303 PXDNQ92626 1479 aa29.95■■■□□ 2.39
PCSK4-211ENST00000591303 CLTCL1P53675 1640 aa29.93■■■□□ 2.38
PCSK4-211ENST00000591303 RALGAPBQ86X10 1494 aa29.92■■■□□ 2.38
PCSK4-211ENST00000591303 ROCK1Q13464 1354 aa29.91■■■□□ 2.38
PCSK4-211ENST00000591303 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
PCSK4-211ENST00000591303 SLIT2O94813 1529 aa29.87■■■□□ 2.37
PCSK4-211ENST00000591303 NPHP3Q7Z494 1330 aa29.85■■■□□ 2.37
PCSK4-211ENST00000591303 XPCQ01831 940 aaPredicted RBP29.84■■■□□ 2.37
PCSK4-211ENST00000591303 CDC42BPGQ6DT37 1551 aa29.82■■■□□ 2.36
PCSK4-211ENST00000591303 UNC5CLQ8IV45 518 aa29.82■■■□□ 2.36
PCSK4-211ENST00000591303 KIF1BO60333 1816 aa29.82■■■□□ 2.36
PCSK4-211ENST00000591303 ESCO1Q5FWF5 840 aa29.81■■■□□ 2.36
PCSK4-211ENST00000591303 FOXO3O43524 673 aa29.8■■■□□ 2.36
PCSK4-211ENST00000591303 HFM1A2PYH4 1435 aa29.79■■■□□ 2.36
PCSK4-211ENST00000591303 PSDA5PKW4 1024 aaPredicted RBP29.77■■■□□ 2.36
PCSK4-211ENST00000591303 USP32Q8NFA0 1604 aa29.77■■■□□ 2.36
PCSK4-211ENST00000591303 SEPT12Q8IYM1 358 aa29.75■■■□□ 2.35
PCSK4-211ENST00000591303 HRCP23327 699 aa29.74■■■□□ 2.35
PCSK4-211ENST00000591303 SF3B2Q13435 895 aaKnown RBP29.73■■■□□ 2.35
PCSK4-211ENST00000591303 PLCH1Q4KWH8 1693 aa29.71■■■□□ 2.35
PCSK4-211ENST00000591303 SPATA31A3Q5VYP0 1347 aa29.69■■■□□ 2.34
PCSK4-211ENST00000591303 PPLO60437 1756 aa29.68■■■□□ 2.34
PCSK4-211ENST00000591303 ONECUT3O60422 494 aaPredicted RBP29.68■■■□□ 2.34
PCSK4-211ENST00000591303 VGFO15240 615 aaPredicted RBP29.67■■■□□ 2.34
PCSK4-211ENST00000591303 NAIPQ13075 1403 aa29.67■■■□□ 2.34
PCSK4-211ENST00000591303 NWD2Q9ULI1 1742 aa29.67■■■□□ 2.34
PCSK4-211ENST00000591303 NUTM2FA1L443 756 aa29.66■■■□□ 2.34
PCSK4-211ENST00000591303 VPS72Q15906 364 aa29.66■■■□□ 2.34
PCSK4-211ENST00000591303 LRPPRCP42704 1394 aaKnown RBP29.65■■■□□ 2.34
PCSK4-211ENST00000591303 KRT27Q7Z3Y8 459 aa29.65■■■□□ 2.34
PCSK4-211ENST00000591303 ITGAEP38570 1179 aa29.63■■■□□ 2.33
PCSK4-211ENST00000591303 ABCA3Q99758 1704 aa29.62■■■□□ 2.33
PCSK4-211ENST00000591303 FMN2Q9NZ56 1722 aa29.62■■■□□ 2.33
PCSK4-211ENST00000591303 KIF1AQ12756 1690 aa29.61■■■□□ 2.33
PCSK4-211ENST00000591303 BAG6P46379 1132 aa29.59■■■□□ 2.33
PCSK4-211ENST00000591303 WAPLQ7Z5K2 1190 aa29.58■■■□□ 2.33
PCSK4-211ENST00000591303 CABLES1Q8TDN4 633 aa29.58■■■□□ 2.33
PCSK4-211ENST00000591303 CCDC144AA2RUR9 1427 aa29.57■■■□□ 2.32
PCSK4-211ENST00000591303 TECPR2O15040 1411 aa29.56■■■□□ 2.32
PCSK4-211ENST00000591303 RGPD8O14715 1765 aaPredicted RBP29.56■■■□□ 2.32
PCSK4-211ENST00000591303 RGPD1P0DJD0 1748 aa29.56■■■□□ 2.32
PCSK4-211ENST00000591303 PLEKHH1Q9ULM0 1364 aa29.55■■■□□ 2.32
PCSK4-211ENST00000591303 RPGRIP1LQ68CZ1 1315 aa29.55■■■□□ 2.32
PCSK4-211ENST00000591303 NRAPQ86VF7 1730 aa29.55■■■□□ 2.32
PCSK4-211ENST00000591303 KRT28Q7Z3Y7 464 aa29.55■■■□□ 2.32
PCSK4-211ENST00000591303 EN1Q05925 392 aaPredicted RBP29.54■■■□□ 2.32
PCSK4-211ENST00000591303 CCDC9Q9Y3X0 531 aaKnown RBP29.54■■■□□ 2.32
PCSK4-211ENST00000591303 TNS3Q68CZ2 1445 aa29.54■■■□□ 2.32
PCSK4-211ENST00000591303 R3HDM1Q15032 1099 aaKnown RBP29.53■■■□□ 2.32
PCSK4-211ENST00000591303 TNS1Q9HBL0 1735 aaKnown RBP29.53■■■□□ 2.32
PCSK4-211ENST00000591303 KNDC1Q76NI1 1749 aa29.51■■■□□ 2.32
PCSK4-211ENST00000591303 PLEKHG5O94827 1062 aa29.49■■■□□ 2.31
PCSK4-211ENST00000591303 STK26Q9P289 416 aa29.49■■■□□ 2.31
PCSK4-211ENST00000591303 FAM83GA6ND36 823 aa29.47■■■□□ 2.31
PCSK4-211ENST00000591303 HAP1P54257 671 aaPredicted RBP29.47■■■□□ 2.31
PCSK4-211ENST00000591303 FAM182BQ5T319 152 aa29.47■■■□□ 2.31
PCSK4-211ENST00000591303 IFT172Q9UG01 1749 aa29.47■■■□□ 2.31
PCSK4-211ENST00000591303 ADGRF5Q8IZF2 1346 aa29.46■■■□□ 2.31
PCSK4-211ENST00000591303 FAM98CQ17RN3 349 aaKnown RBP29.46■■■□□ 2.31
PCSK4-211ENST00000591303 DISP2A7MBM2 1401 aa29.45■■■□□ 2.31
PCSK4-211ENST00000591303 A0A0G2JS52 829 aa29.44■■■□□ 2.3
PCSK4-211ENST00000591303 MYT1Q01538 1121 aa29.44■■■□□ 2.3
PCSK4-211ENST00000591303 ABCC11Q96J66 1382 aa29.43■■■□□ 2.3
PCSK4-211ENST00000591303 THSD7AQ9UPZ6 1657 aa29.4■■■□□ 2.3
PCSK4-211ENST00000591303 SBNO1A3KN83 1393 aa29.4■■■□□ 2.3
PCSK4-211ENST00000591303 EZH2Q15910 746 aaKnown RBP29.4■■■□□ 2.3
PCSK4-211ENST00000591303 TMEM132EQ6IEE7 984 aa29.4■■■□□ 2.3
PCSK4-211ENST00000591303 PHF8Q9UPP1 1060 aa29.4■■■□□ 2.3
PCSK4-211ENST00000591303 NRXN1Q9ULB1 1477 aa29.4■■■□□ 2.3
PCSK4-211ENST00000591303 RRBP1Q9P2E9 1410 aaKnown RBP29.39■■■□□ 2.3
PCSK4-211ENST00000591303 YY1P25490 414 aa29.39■■■□□ 2.3
PCSK4-211ENST00000591303 PSME1Q06323 249 aa29.37■■■□□ 2.29
PCSK4-211ENST00000591303 COL14A1Q05707 1796 aaKnown RBP29.35■■■□□ 2.29
PCSK4-211ENST00000591303 BTG4Q9NY30 223 aa29.35■■■□□ 2.29
PCSK4-211ENST00000591303 ARHGEF10O15013 1369 aa29.35■■■□□ 2.29
PCSK4-211ENST00000591303 TRPM3Q9HCF6 1732 aaPredicted RBP29.34■■■□□ 2.29
PCSK4-211ENST00000591303 LMOD2Q6P5Q4 547 aa29.34■■■□□ 2.29
PCSK4-211ENST00000591303 CAMKK2Q96RR4 588 aa29.33■■■□□ 2.29
PCSK4-211ENST00000591303 YTHDC2Q9H6S0 1430 aaKnown RBP29.33■■■□□ 2.29
PCSK4-211ENST00000591303 RREB1Q92766 1687 aa29.31■■■□□ 2.28
PCSK4-211ENST00000591303 SPATA31A5Q5VU36 1347 aa29.3■■■□□ 2.28
PCSK4-211ENST00000591303 SPATA31A7Q8IWB4 1347 aa29.3■■■□□ 2.28
PCSK4-211ENST00000591303 ALS2Q96Q42 1657 aa29.3■■■□□ 2.28
PCSK4-211ENST00000591303 PIK3C2GO75747 1445 aa29.29■■■□□ 2.28
PCSK4-211ENST00000591303 CRYBG1Q9Y4K1 1723 aa29.29■■■□□ 2.28
PCSK4-211ENST00000591303 ADGRB2O60241 1585 aa29.29■■■□□ 2.28
PCSK4-211ENST00000591303 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
PCSK4-211ENST00000591303 NUP188Q5SRE5 1749 aa29.28■■■□□ 2.28
PCSK4-211ENST00000591303 SLC4A1APQ9BWU0 796 aaKnown RBP29.25■■■□□ 2.27
PCSK4-211ENST00000591303 TRIM37O94972 964 aa29.24■■■□□ 2.27
PCSK4-211ENST00000591303 RGL3Q3MIN7 710 aa29.24■■■□□ 2.27
PCSK4-211ENST00000591303 SIRT1Q96EB6 747 aa29.24■■■□□ 2.27
PCSK4-211ENST00000591303 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
PCSK4-211ENST00000591303 PMFBP1Q8TBY8 1022 aa29.23■■■□□ 2.27
PCSK4-211ENST00000591303 ANKRD30BQ9BXX2 1392 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms