RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, human

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-219	ENST00000590953	PLEKHH1	Q9ULM0	1364 aa		14.07	□□□□□ -0.16
RANBP3-219	ENST00000590953	UBAP1L	F5GYI3	381 aa		14.06	□□□□□ -0.16
RANBP3-219	ENST00000590953	DCC	P43146	1447 aa		14.06	□□□□□ -0.16
RANBP3-219	ENST00000590953	ARHGEF28	Q8N1W1	1705 aa	Known RBP	14.05	□□□□□ -0.16
RANBP3-219	ENST00000590953	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	14.04	□□□□□ -0.16
RANBP3-219	ENST00000590953	SAFB2	Q14151	953 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
RANBP3-219	ENST00000590953	CENPJ	Q9HC77	1338 aa	Predicted RBP	14.04	□□□□□ -0.16
RANBP3-219	ENST00000590953	NALCN	Q8IZF0	1738 aa		14.03	□□□□□ -0.16
RANBP3-219	ENST00000590953	CDC42BPG	Q6DT37	1551 aa		14.01	□□□□□ -0.17
RANBP3-219	ENST00000590953	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.01	□□□□□ -0.17
RANBP3-219	ENST00000590953	FBXO41	Q8TF61	875 aa		14.01	□□□□□ -0.17
RANBP3-219	ENST00000590953	SLAIN2	Q9P270	581 aa		14	□□□□□ -0.17
RANBP3-219	ENST00000590953	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.99	□□□□□ -0.17
RANBP3-219	ENST00000590953	ADGRB2	O60241	1585 aa		13.99	□□□□□ -0.17
RANBP3-219	ENST00000590953	USP47	Q96K76	1375 aa		13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	SCAF1	Q9H7N4	1312 aa	Known RBP	13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	WASL	O00401	505 aa	Predicted RBP	13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	SLC24A1	O60721	1099 aa		13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	ZEB1	P37275	1124 aa	Predicted RBP	13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	PIP4K2B	P78356	416 aa		13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	MST1R	Q04912	1400 aa		13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	QRICH2	Q9H0J4	1663 aa		13.98	□□□□□ -0.17
RANBP3-219	ENST00000590953	SBNO2	Q9Y2G9	1366 aa		13.96	□□□□□ -0.17
RANBP3-219	ENST00000590953	ST20-MTHFS	A0A0A6YYL1	179 aa		13.96	□□□□□ -0.17
RANBP3-219	ENST00000590953	EVC2	Q86UK5	1308 aa		13.95	□□□□□ -0.18
RANBP3-219	ENST00000590953	C1orf167	Q5SNV9	1468 aa		13.95	□□□□□ -0.18
RANBP3-219	ENST00000590953	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
RANBP3-219	ENST00000590953	FMN2	Q9NZ56	1722 aa		13.95	□□□□□ -0.18
RANBP3-219	ENST00000590953	NUTM2F	A1L443	756 aa		13.94	□□□□□ -0.18
RANBP3-219	ENST00000590953	ANKAR	Q7Z5J8	1434 aa		13.94	□□□□□ -0.18
RANBP3-219	ENST00000590953	CDK19	Q9BWU1	502 aa		13.94	□□□□□ -0.18
RANBP3-219	ENST00000590953	TULP4	Q9NRJ4	1543 aa		13.93	□□□□□ -0.18
RANBP3-219	ENST00000590953	SRPK2	P78362	688 aa	Known RBP	13.92	□□□□□ -0.18
RANBP3-219	ENST00000590953	ESCO1	Q5FWF5	840 aa		13.92	□□□□□ -0.18
RANBP3-219	ENST00000590953	BRINP3	Q76B58	766 aa		13.92	□□□□□ -0.18
RANBP3-219	ENST00000590953	ROBO1	Q9Y6N7	1651 aa		13.91	□□□□□ -0.18
RANBP3-219	ENST00000590953	NUDT16	Q96DE0	195 aa	Known RBP	13.91	□□□□□ -0.18
RANBP3-219	ENST00000590953	TESK2	Q96S53	571 aa		13.91	□□□□□ -0.18
RANBP3-219	ENST00000590953	HSPA5	P11021	654 aa	Known RBP	13.9	□□□□□ -0.18
RANBP3-219	ENST00000590953	TMF1	P82094	1093 aa		13.9	□□□□□ -0.18
RANBP3-219	ENST00000590953	ORAI2	Q96SN7	254 aa		13.9	□□□□□ -0.18
RANBP3-219	ENST00000590953	PUS7	Q96PZ0	661 aa	Known RBP	13.89	□□□□□ -0.19
RANBP3-219	ENST00000590953	CABP2	Q9NPB3	220 aa		13.89	□□□□□ -0.19
RANBP3-219	ENST00000590953	PHF8	Q9UPP1	1060 aa		13.89	□□□□□ -0.19
RANBP3-219	ENST00000590953	CCDC61	Q9Y6R9	512 aa		13.89	□□□□□ -0.19
RANBP3-219	ENST00000590953	PRR36	Q9H6K5	1346 aa		13.89	□□□□□ -0.19
RANBP3-219	ENST00000590953	ATP7B	P35670	1465 aa		13.88	□□□□□ -0.19
RANBP3-219	ENST00000590953	CDCA8	Q53HL2	280 aa		13.88	□□□□□ -0.19
RANBP3-219	ENST00000590953	USP32	Q8NFA0	1604 aa		13.88	□□□□□ -0.19
RANBP3-219	ENST00000590953	ATAD2	Q6PL18	1390 aa		13.87	□□□□□ -0.19
RANBP3-219	ENST00000590953	KIF1A	Q12756	1690 aa		13.87	□□□□□ -0.19
RANBP3-219	ENST00000590953	NPHP3	Q7Z494	1330 aa		13.87	□□□□□ -0.19
RANBP3-219	ENST00000590953	ITSN1	Q15811	1721 aa		13.87	□□□□□ -0.19
RANBP3-219	ENST00000590953	RGPD8	O14715	1765 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-219	ENST00000590953	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-219	ENST00000590953	PLEKHG3	A1L390	1219 aa		13.85	□□□□□ -0.19
RANBP3-219	ENST00000590953	FOXO3	O43524	673 aa		13.85	□□□□□ -0.19
RANBP3-219	ENST00000590953	HSPA1L	P34931	641 aa		13.85	□□□□□ -0.19
RANBP3-219	ENST00000590953	ILDR1	Q86SU0	546 aa	Predicted RBP	13.85	□□□□□ -0.19
RANBP3-219	ENST00000590953	PMFBP1	Q8TBY8	1022 aa		13.85	□□□□□ -0.19
RANBP3-219	ENST00000590953	PPIP5K1	Q6PFW1	1433 aa		13.84	□□□□□ -0.19
RANBP3-219	ENST00000590953	NHSL1	Q5SYE7	1610 aa		13.84	□□□□□ -0.19
RANBP3-219	ENST00000590953	NGDN	Q8NEJ9	315 aa	Known RBP	13.84	□□□□□ -0.19
RANBP3-219	ENST00000590953	DISP3	Q9P2K9	1392 aa		13.83	□□□□□ -0.19
RANBP3-219	ENST00000590953	TOPAZ1	Q8N9V7	1692 aa		13.83	□□□□□ -0.2
RANBP3-219	ENST00000590953	PSME1	Q06323	249 aa		13.83	□□□□□ -0.2
RANBP3-219	ENST00000590953	CABP1	Q9NZU7	370 aa		13.83	□□□□□ -0.2
RANBP3-219	ENST00000590953	PHLPP1	O60346	1717 aa		13.83	□□□□□ -0.2
RANBP3-219	ENST00000590953	DDX17	Q92841	729 aa	Known RBP	13.82	□□□□□ -0.2
RANBP3-219	ENST00000590953	ACE	P12821	1306 aa		13.82	□□□□□ -0.2
RANBP3-219	ENST00000590953	SOS2	Q07890	1332 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-219	ENST00000590953	POLR3A	O14802	1390 aa	Predicted RBP	13.82	□□□□□ -0.2
RANBP3-219	ENST00000590953	NINL	Q9Y2I6	1382 aa		13.82	□□□□□ -0.2
RANBP3-219	ENST00000590953	KRT28	Q7Z3Y7	464 aa		13.81	□□□□□ -0.2
RANBP3-219	ENST00000590953	TMC1	Q8TDI8	760 aa		13.81	□□□□□ -0.2
RANBP3-219	ENST00000590953	LRRC59	Q96AG4	307 aa	Known RBP	13.81	□□□□□ -0.2
RANBP3-219	ENST00000590953	ZNF692	Q9BU19	519 aa	Predicted RBP	13.8	□□□□□ -0.2
RANBP3-219	ENST00000590953	PXDN	Q92626	1479 aa		13.8	□□□□□ -0.2
RANBP3-219	ENST00000590953	COL16A1	Q07092	1604 aa	Predicted RBP	13.79	□□□□□ -0.2
RANBP3-219	ENST00000590953	XPC	Q01831	940 aa	Predicted RBP	13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	SLC12A5	Q9H2X9	1139 aa		13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	TERF2IP	Q9NYB0	399 aa		13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	SBNO1	A3KN83	1393 aa		13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	BRD4	O60885	1362 aa	Predicted RBP	13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	JCAD	Q9P266	1359 aa		13.78	□□□□□ -0.2
RANBP3-219	ENST00000590953	POLR3GL	Q9BT43	218 aa		13.77	□□□□□ -0.21
RANBP3-219	ENST00000590953	CPSF1	Q10570	1443 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-219	ENST00000590953	TNS3	Q68CZ2	1445 aa		13.75	□□□□□ -0.21
RANBP3-219	ENST00000590953	KTN1	Q86UP2	1357 aa	Known RBP	13.75	□□□□□ -0.21
RANBP3-219	ENST00000590953	SPATA31A3	Q5VYP0	1347 aa		13.75	□□□□□ -0.21
RANBP3-219	ENST00000590953	PAK3	O75914	559 aa	Predicted RBP	13.75	□□□□□ -0.21
RANBP3-219	ENST00000590953	USP6	P35125	1406 aa		13.74	□□□□□ -0.21
RANBP3-219	ENST00000590953	ARHGEF10	O15013	1369 aa		13.74	□□□□□ -0.21
RANBP3-219	ENST00000590953	C11orf95	C9JLR9	678 aa	Predicted RBP	13.74	□□□□□ -0.21
RANBP3-219	ENST00000590953	AKAP12	Q02952	1782 aa		13.73	□□□□□ -0.21
RANBP3-219	ENST00000590953	ANKRD36B	Q8N2N9	1353 aa		13.73	□□□□□ -0.21
RANBP3-219	ENST00000590953	KIF7	Q2M1P5	1343 aa		13.73	□□□□□ -0.21
RANBP3-219	ENST00000590953	LMOD2	Q6P5Q4	547 aa		13.73	□□□□□ -0.21
RANBP3-219	ENST00000590953	CD163L1	Q9NR16	1453 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 104 ms