RNA–Protein interactions for RNA: ENST00000590952.1

LINC01534-203, Transcript of long intergenic non-protein coding RNA 1534, humanhuman

TSL 4

Gene LINC01534, Length 550 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01534-203ENST00000590952 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
LINC01534-203ENST00000590952 TRPC5Q9UL62 973 aaPredicted RBP23.91■■□□□ 1.42
LINC01534-203ENST00000590952 FOXD1Q16676 465 aa23.9■■□□□ 1.42
LINC01534-203ENST00000590952 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
LINC01534-203ENST00000590952 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.42
LINC01534-203ENST00000590952 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.42
LINC01534-203ENST00000590952 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
LINC01534-203ENST00000590952 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
LINC01534-203ENST00000590952 RGL3Q3MIN7 710 aa23.87■■□□□ 1.41
LINC01534-203ENST00000590952 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
LINC01534-203ENST00000590952 TECPR2O15040 1411 aa23.86■■□□□ 1.41
LINC01534-203ENST00000590952 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 FOXO3O43524 673 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 STK26Q9P289 416 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 ATAD2Q6PL18 1390 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 MYOM2P54296 1465 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 PXDNQ92626 1479 aa23.85■■□□□ 1.41
LINC01534-203ENST00000590952 WAPLQ7Z5K2 1190 aa23.84■■□□□ 1.41
LINC01534-203ENST00000590952 MPHOSPH9Q99550 1183 aa23.84■■□□□ 1.41
LINC01534-203ENST00000590952 ATRNO75882 1429 aa23.84■■□□□ 1.41
LINC01534-203ENST00000590952 TMEM132EQ6IEE7 984 aa23.8■■□□□ 1.4
LINC01534-203ENST00000590952 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
LINC01534-203ENST00000590952 XPCQ01831 940 aaPredicted RBP23.79■■□□□ 1.4
LINC01534-203ENST00000590952 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
LINC01534-203ENST00000590952 BCL9LQ86UU0 1499 aa23.79■■□□□ 1.4
LINC01534-203ENST00000590952 PIK3C2GO75747 1445 aa23.78■■□□□ 1.4
LINC01534-203ENST00000590952 NUTM2FA1L443 756 aa23.78■■□□□ 1.4
LINC01534-203ENST00000590952 IFT172Q9UG01 1749 aa23.78■■□□□ 1.4
LINC01534-203ENST00000590952 PLEKHH1Q9ULM0 1364 aa23.76■■□□□ 1.39
LINC01534-203ENST00000590952 KNDC1Q76NI1 1749 aa23.76■■□□□ 1.39
LINC01534-203ENST00000590952 YTHDC2Q9H6S0 1430 aaKnown RBP23.76■■□□□ 1.39
LINC01534-203ENST00000590952 SRCAPQ6ZRS2 3230 aa23.75■■□□□ 1.39
LINC01534-203ENST00000590952 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
LINC01534-203ENST00000590952 GJD4Q96KN9 370 aaPredicted RBP23.75■■□□□ 1.39
LINC01534-203ENST00000590952 MARF1Q9Y4F3 1742 aaKnown RBP23.74■■□□□ 1.39
LINC01534-203ENST00000590952 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
LINC01534-203ENST00000590952 EP400Q96L91 3159 aa23.73■■□□□ 1.39
LINC01534-203ENST00000590952 C14orf93Q9H972 538 aaKnown RBP23.73■■□□□ 1.39
LINC01534-203ENST00000590952 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
LINC01534-203ENST00000590952 FMN2Q9NZ56 1722 aa23.71■■□□□ 1.39
LINC01534-203ENST00000590952 UNC5CLQ8IV45 518 aa23.71■■□□□ 1.39
LINC01534-203ENST00000590952 KIF1AQ12756 1690 aa23.7■■□□□ 1.39
LINC01534-203ENST00000590952 DHX57Q6P158 1386 aaKnown RBP23.69■■□□□ 1.38
LINC01534-203ENST00000590952 PSME1Q06323 249 aa23.69■■□□□ 1.38
LINC01534-203ENST00000590952 SLIT2O94813 1529 aa23.68■■□□□ 1.38
LINC01534-203ENST00000590952 ZRANB1Q9UGI0 708 aa23.67■■□□□ 1.38
LINC01534-203ENST00000590952 PHF8Q9UPP1 1060 aa23.67■■□□□ 1.38
LINC01534-203ENST00000590952 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.67■■□□□ 1.38
LINC01534-203ENST00000590952 CFAP70Q5T0N1 1121 aa23.66■■□□□ 1.38
LINC01534-203ENST00000590952 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
LINC01534-203ENST00000590952 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
LINC01534-203ENST00000590952 TNS3Q68CZ2 1445 aa23.62■■□□□ 1.37
LINC01534-203ENST00000590952 HAP1P54257 671 aaPredicted RBP23.62■■□□□ 1.37
LINC01534-203ENST00000590952 PRAM1Q96QH2 718 aa23.62■■□□□ 1.37
LINC01534-203ENST00000590952 SBNO1A3KN83 1393 aa23.62■■□□□ 1.37
LINC01534-203ENST00000590952 USP32Q8NFA0 1604 aa23.61■■□□□ 1.37
LINC01534-203ENST00000590952 POGKQ9P215 609 aa23.59■■□□□ 1.37
LINC01534-203ENST00000590952 GLI3P10071 1580 aa23.59■■□□□ 1.37
LINC01534-203ENST00000590952 RGPD8O14715 1765 aaPredicted RBP23.58■■□□□ 1.37
LINC01534-203ENST00000590952 ARHGEF10O15013 1369 aa23.58■■□□□ 1.37
LINC01534-203ENST00000590952 SAFB2Q14151 953 aaKnown RBP eCLIP23.58■■□□□ 1.37
LINC01534-203ENST00000590952 VPS72Q15906 364 aa23.58■■□□□ 1.37
LINC01534-203ENST00000590952 CABLES1Q8TDN4 633 aa23.58■■□□□ 1.37
LINC01534-203ENST00000590952 ONECUT3O60422 494 aaPredicted RBP23.57■■□□□ 1.36
LINC01534-203ENST00000590952 DLC1Q96QB1 1528 aa23.57■■□□□ 1.36
LINC01534-203ENST00000590952 ANKARQ7Z5J8 1434 aa23.57■■□□□ 1.36
LINC01534-203ENST00000590952 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
LINC01534-203ENST00000590952 LMOD2Q6P5Q4 547 aa23.55■■□□□ 1.36
LINC01534-203ENST00000590952 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
LINC01534-203ENST00000590952 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
LINC01534-203ENST00000590952 NWD2Q9ULI1 1742 aa23.52■■□□□ 1.36
LINC01534-203ENST00000590952 FAM83GA6ND36 823 aa23.51■■□□□ 1.35
LINC01534-203ENST00000590952 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
LINC01534-203ENST00000590952 CCDC9Q9Y3X0 531 aaKnown RBP23.51■■□□□ 1.35
LINC01534-203ENST00000590952 ADGRB2O60241 1585 aa23.5■■□□□ 1.35
LINC01534-203ENST00000590952 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
LINC01534-203ENST00000590952 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
LINC01534-203ENST00000590952 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
LINC01534-203ENST00000590952 EIF3AQ14152 1382 aaKnown RBP23.49■■□□□ 1.35
LINC01534-203ENST00000590952 RAB3GAP2Q9H2M9 1393 aa23.49■■□□□ 1.35
LINC01534-203ENST00000590952 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
LINC01534-203ENST00000590952 PLCH1Q4KWH8 1693 aa23.48■■□□□ 1.35
LINC01534-203ENST00000590952 BRWD3Q6RI45 1802 aa23.48■■□□□ 1.35
LINC01534-203ENST00000590952 KRT27Q7Z3Y8 459 aa23.48■■□□□ 1.35
LINC01534-203ENST00000590952 GPRASP1Q5JY77 1395 aa23.47■■□□□ 1.35
LINC01534-203ENST00000590952 ABCA3Q99758 1704 aa23.47■■□□□ 1.35
LINC01534-203ENST00000590952 HIRIP3Q9BW71 556 aaPredicted RBP23.46■■□□□ 1.35
LINC01534-203ENST00000590952 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
LINC01534-203ENST00000590952 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
LINC01534-203ENST00000590952 DCAF11Q8TEB1 546 aa23.45■■□□□ 1.34
LINC01534-203ENST00000590952 MINK1Q8N4C8 1332 aaPredicted RBP23.44■■□□□ 1.34
LINC01534-203ENST00000590952 KDM2AQ9Y2K7 1162 aa23.44■■□□□ 1.34
LINC01534-203ENST00000590952 BTG4Q9NY30 223 aa23.43■■□□□ 1.34
LINC01534-203ENST00000590952 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
LINC01534-203ENST00000590952 PRR36Q9H6K5 1346 aa23.42■■□□□ 1.34
LINC01534-203ENST00000590952 TULP4Q9NRJ4 1543 aa23.42■■□□□ 1.34
LINC01534-203ENST00000590952 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
LINC01534-203ENST00000590952 ALS2Q96Q42 1657 aa23.4■■□□□ 1.34
LINC01534-203ENST00000590952 A0A0G2JS52 829 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms