RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 VGFO15240 615 aaPredicted RBP16.39■□□□□ 0.21
GFAP-217ENST00000590922 ZRANB1Q9UGI0 708 aa16.39■□□□□ 0.21
GFAP-217ENST00000590922 PRAG1Q86YV5 1406 aa16.38■□□□□ 0.21
GFAP-217ENST00000590922 EP400Q96L91 3159 aa16.37■□□□□ 0.21
GFAP-217ENST00000590922 MYOM2P54296 1465 aa16.35■□□□□ 0.21
GFAP-217ENST00000590922 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
GFAP-217ENST00000590922 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
GFAP-217ENST00000590922 NPHP3Q7Z494 1330 aa16.35■□□□□ 0.21
GFAP-217ENST00000590922 RPGRIP1LQ68CZ1 1315 aa16.34■□□□□ 0.21
GFAP-217ENST00000590922 BCL9LQ86UU0 1499 aa16.34■□□□□ 0.21
GFAP-217ENST00000590922 ESCO1Q5FWF5 840 aa16.33■□□□□ 0.2
GFAP-217ENST00000590922 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
GFAP-217ENST00000590922 CDC42BPGQ6DT37 1551 aa16.33■□□□□ 0.2
GFAP-217ENST00000590922 PPLO60437 1756 aa16.32■□□□□ 0.2
GFAP-217ENST00000590922 PXDNQ92626 1479 aa16.32■□□□□ 0.2
GFAP-217ENST00000590922 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
GFAP-217ENST00000590922 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.29■□□□□ 0.2
GFAP-217ENST00000590922 FOXO3O43524 673 aa16.29■□□□□ 0.2
GFAP-217ENST00000590922 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
GFAP-217ENST00000590922 LRPPRCP42704 1394 aaKnown RBP16.28■□□□□ 0.2
GFAP-217ENST00000590922 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
GFAP-217ENST00000590922 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
GFAP-217ENST00000590922 UNC5CLQ8IV45 518 aa16.25■□□□□ 0.19
GFAP-217ENST00000590922 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
GFAP-217ENST00000590922 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
GFAP-217ENST00000590922 GLI3P10071 1580 aa16.24■□□□□ 0.19
GFAP-217ENST00000590922 SLIT2O94813 1529 aa16.24■□□□□ 0.19
GFAP-217ENST00000590922 TECPR2O15040 1411 aa16.23■□□□□ 0.19
GFAP-217ENST00000590922 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
GFAP-217ENST00000590922 BRWD3Q6RI45 1802 aa16.22■□□□□ 0.19
GFAP-217ENST00000590922 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
GFAP-217ENST00000590922 STK26Q9P289 416 aa16.22■□□□□ 0.19
GFAP-217ENST00000590922 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
GFAP-217ENST00000590922 ADGRF5Q8IZF2 1346 aa16.21■□□□□ 0.19
GFAP-217ENST00000590922 KIF1AQ12756 1690 aa16.21■□□□□ 0.19
GFAP-217ENST00000590922 ACIN1Q9UKV3 1341 aaKnown RBP16.2■□□□□ 0.18
GFAP-217ENST00000590922 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
GFAP-217ENST00000590922 USP32Q8NFA0 1604 aa16.2■□□□□ 0.18
GFAP-217ENST00000590922 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
GFAP-217ENST00000590922 ABCC11Q96J66 1382 aa16.2■□□□□ 0.18
GFAP-217ENST00000590922 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
GFAP-217ENST00000590922 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
GFAP-217ENST00000590922 ANKRD30BQ9BXX2 1392 aa16.18■□□□□ 0.18
GFAP-217ENST00000590922 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
GFAP-217ENST00000590922 DEFB132Q7Z7B7 95 aa16.18■□□□□ 0.18
GFAP-217ENST00000590922 SEPT12Q8IYM1 358 aa16.18■□□□□ 0.18
GFAP-217ENST00000590922 IFT172Q9UG01 1749 aa16.17■□□□□ 0.18
GFAP-217ENST00000590922 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
GFAP-217ENST00000590922 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
GFAP-217ENST00000590922 HRCP23327 699 aa16.16■□□□□ 0.18
GFAP-217ENST00000590922 VPS72Q15906 364 aa16.16■□□□□ 0.18
GFAP-217ENST00000590922 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
GFAP-217ENST00000590922 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
GFAP-217ENST00000590922 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
GFAP-217ENST00000590922 PLCH1Q4KWH8 1693 aa16.15■□□□□ 0.18
GFAP-217ENST00000590922 PSME1Q06323 249 aa16.15■□□□□ 0.18
GFAP-217ENST00000590922 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
GFAP-217ENST00000590922 SPATA31E1Q6ZUB1 1445 aa16.15■□□□□ 0.18
GFAP-217ENST00000590922 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
GFAP-217ENST00000590922 LRP5O75197 1615 aa16.15■□□□□ 0.18
GFAP-217ENST00000590922 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
GFAP-217ENST00000590922 PIK3C2GO75747 1445 aa16.13■□□□□ 0.17
GFAP-217ENST00000590922 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
GFAP-217ENST00000590922 KRT27Q7Z3Y8 459 aa16.13■□□□□ 0.17
GFAP-217ENST00000590922 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
GFAP-217ENST00000590922 PHF8Q9UPP1 1060 aa16.13■□□□□ 0.17
GFAP-217ENST00000590922 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
GFAP-217ENST00000590922 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
GFAP-217ENST00000590922 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
GFAP-217ENST00000590922 ABCA3Q99758 1704 aa16.11■□□□□ 0.17
GFAP-217ENST00000590922 ARHGEF10O15013 1369 aa16.11■□□□□ 0.17
GFAP-217ENST00000590922 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
GFAP-217ENST00000590922 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
GFAP-217ENST00000590922 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
GFAP-217ENST00000590922 A0A0G2JS52 829 aa16.08■□□□□ 0.16
GFAP-217ENST00000590922 FAM83GA6ND36 823 aa16.08■□□□□ 0.16
GFAP-217ENST00000590922 BAG6P46379 1132 aa16.08■□□□□ 0.16
GFAP-217ENST00000590922 MYT1Q01538 1121 aa16.08■□□□□ 0.16
GFAP-217ENST00000590922 C14orf93Q9H972 538 aaKnown RBP16.07■□□□□ 0.16
GFAP-217ENST00000590922 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
GFAP-217ENST00000590922 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
GFAP-217ENST00000590922 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
GFAP-217ENST00000590922 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
GFAP-217ENST00000590922 SAFB2Q14151 953 aaKnown RBP eCLIP16.04■□□□□ 0.16
GFAP-217ENST00000590922 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
GFAP-217ENST00000590922 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
GFAP-217ENST00000590922 ANKARQ7Z5J8 1434 aa16.03■□□□□ 0.16
GFAP-217ENST00000590922 RGPD1P0DJD0 1748 aa16.03■□□□□ 0.16
GFAP-217ENST00000590922 CFAP70Q5T0N1 1121 aa16.03■□□□□ 0.16
GFAP-217ENST00000590922 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
GFAP-217ENST00000590922 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
GFAP-217ENST00000590922 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
GFAP-217ENST00000590922 TRPM3Q9HCF6 1732 aaPredicted RBP16.02■□□□□ 0.15
GFAP-217ENST00000590922 POGKQ9P215 609 aa16.01■□□□□ 0.15
GFAP-217ENST00000590922 DLC1Q96QB1 1528 aa16■□□□□ 0.15
GFAP-217ENST00000590922 ALS2Q96Q42 1657 aa16■□□□□ 0.15
GFAP-217ENST00000590922 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
GFAP-217ENST00000590922 ADGRB2O60241 1585 aa16■□□□□ 0.15
GFAP-217ENST00000590922 GPRASP1Q5JY77 1395 aa16■□□□□ 0.15
GFAP-217ENST00000590922 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms