RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 LAMC1P11047 1609 aa23.86■■□□□ 1.41
GCDH-213ENST00000590627 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
GCDH-213ENST00000590627 PNPLA6Q8IY17 1366 aa23.84■■□□□ 1.41
GCDH-213ENST00000590627 RXRBP28702 533 aa23.83■■□□□ 1.41
GCDH-213ENST00000590627 DDX17Q92841 729 aaKnown RBP23.83■■□□□ 1.41
GCDH-213ENST00000590627 CDK12Q9NYV4 1490 aaPredicted RBP23.82■■□□□ 1.4
GCDH-213ENST00000590627 RGL3Q3MIN7 710 aa23.82■■□□□ 1.4
GCDH-213ENST00000590627 AFF2P51816 1311 aa23.82■■□□□ 1.4
GCDH-213ENST00000590627 STAC3Q96MF2 364 aa23.81■■□□□ 1.4
GCDH-213ENST00000590627 SOS2Q07890 1332 aaPredicted RBP23.79■■□□□ 1.4
GCDH-213ENST00000590627 UPF1Q92900 1129 aaKnown RBP eCLIP23.77■■□□□ 1.4
GCDH-213ENST00000590627 ORAI2Q96SN7 254 aa23.77■■□□□ 1.4
GCDH-213ENST00000590627 DCAF11Q8TEB1 546 aa23.76■■□□□ 1.39
GCDH-213ENST00000590627 CDC42BPGQ6DT37 1551 aa23.75■■□□□ 1.39
GCDH-213ENST00000590627 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
GCDH-213ENST00000590627 IFT172Q9UG01 1749 aa23.74■■□□□ 1.39
GCDH-213ENST00000590627 ADGRF5Q8IZF2 1346 aa23.74■■□□□ 1.39
GCDH-213ENST00000590627 TECPR2O15040 1411 aa23.73■■□□□ 1.39
GCDH-213ENST00000590627 MYOM2P54296 1465 aa23.73■■□□□ 1.39
GCDH-213ENST00000590627 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
GCDH-213ENST00000590627 QTRT2Q9H974 415 aaKnown RBP23.71■■□□□ 1.39
GCDH-213ENST00000590627 KDM2AQ9Y2K7 1162 aa23.7■■□□□ 1.38
GCDH-213ENST00000590627 COL22A1Q8NFW1 1626 aaPredicted RBP23.7■■□□□ 1.38
GCDH-213ENST00000590627 LRPPRCP42704 1394 aaKnown RBP23.69■■□□□ 1.38
GCDH-213ENST00000590627 NPHP3Q7Z494 1330 aa23.69■■□□□ 1.38
GCDH-213ENST00000590627 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
GCDH-213ENST00000590627 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
GCDH-213ENST00000590627 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
GCDH-213ENST00000590627 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
GCDH-213ENST00000590627 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
GCDH-213ENST00000590627 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
GCDH-213ENST00000590627 ESCO1Q5FWF5 840 aa23.67■■□□□ 1.38
GCDH-213ENST00000590627 RGS12O14924 1447 aa23.67■■□□□ 1.38
GCDH-213ENST00000590627 NBPF8Q3BBV2 869 aa23.65■■□□□ 1.38
GCDH-213ENST00000590627 PXDNQ92626 1479 aa23.64■■□□□ 1.38
GCDH-213ENST00000590627 STK26Q9P289 416 aa23.64■■□□□ 1.37
GCDH-213ENST00000590627 WAPLQ7Z5K2 1190 aa23.63■■□□□ 1.37
GCDH-213ENST00000590627 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
GCDH-213ENST00000590627 USP21Q9UK80 565 aa23.62■■□□□ 1.37
GCDH-213ENST00000590627 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
GCDH-213ENST00000590627 YTHDC2Q9H6S0 1430 aaKnown RBP23.6■■□□□ 1.37
GCDH-213ENST00000590627 FOXO3O43524 673 aa23.6■■□□□ 1.37
GCDH-213ENST00000590627 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
GCDH-213ENST00000590627 TRPC5Q9UL62 973 aaPredicted RBP23.6■■□□□ 1.37
GCDH-213ENST00000590627 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
GCDH-213ENST00000590627 FMN2Q9NZ56 1722 aa23.59■■□□□ 1.37
GCDH-213ENST00000590627 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
GCDH-213ENST00000590627 C14orf93Q9H972 538 aaKnown RBP23.57■■□□□ 1.36
GCDH-213ENST00000590627 KIF1AQ12756 1690 aa23.57■■□□□ 1.36
GCDH-213ENST00000590627 RALGAPBQ86X10 1494 aa23.56■■□□□ 1.36
GCDH-213ENST00000590627 ATRNO75882 1429 aa23.56■■□□□ 1.36
GCDH-213ENST00000590627 NUTM2FA1L443 756 aa23.55■■□□□ 1.36
GCDH-213ENST00000590627 XPCQ01831 940 aaPredicted RBP23.54■■□□□ 1.36
GCDH-213ENST00000590627 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
GCDH-213ENST00000590627 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
GCDH-213ENST00000590627 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
GCDH-213ENST00000590627 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
GCDH-213ENST00000590627 BCL9LQ86UU0 1499 aa23.51■■□□□ 1.35
GCDH-213ENST00000590627 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
GCDH-213ENST00000590627 SPATA31A3Q5VYP0 1347 aa23.5■■□□□ 1.35
GCDH-213ENST00000590627 NBPF1Q3BBV0 1214 aa23.49■■□□□ 1.35
GCDH-213ENST00000590627 ROCK2O75116 1388 aaKnown RBP23.48■■□□□ 1.35
GCDH-213ENST00000590627 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.47■■□□□ 1.35
GCDH-213ENST00000590627 KRT28Q7Z3Y7 464 aa23.47■■□□□ 1.35
GCDH-213ENST00000590627 RGPD8O14715 1765 aaPredicted RBP23.46■■□□□ 1.35
GCDH-213ENST00000590627 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
GCDH-213ENST00000590627 PHF8Q9UPP1 1060 aa23.45■■□□□ 1.34
GCDH-213ENST00000590627 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
GCDH-213ENST00000590627 SLIT2O94813 1529 aa23.44■■□□□ 1.34
GCDH-213ENST00000590627 PSME1Q06323 249 aa23.44■■□□□ 1.34
GCDH-213ENST00000590627 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
GCDH-213ENST00000590627 PRAM1Q96QH2 718 aa23.44■■□□□ 1.34
GCDH-213ENST00000590627 TNS3Q68CZ2 1445 aa23.43■■□□□ 1.34
GCDH-213ENST00000590627 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
GCDH-213ENST00000590627 USP32Q8NFA0 1604 aa23.43■■□□□ 1.34
GCDH-213ENST00000590627 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
GCDH-213ENST00000590627 ANKARQ7Z5J8 1434 aa23.41■■□□□ 1.34
GCDH-213ENST00000590627 SBNO1A3KN83 1393 aa23.4■■□□□ 1.34
GCDH-213ENST00000590627 EP400Q96L91 3159 aa23.4■■□□□ 1.34
GCDH-213ENST00000590627 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
GCDH-213ENST00000590627 POGKQ9P215 609 aa23.4■■□□□ 1.34
GCDH-213ENST00000590627 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.33
GCDH-213ENST00000590627 CCDC125Q86Z20 511 aa23.38■■□□□ 1.33
GCDH-213ENST00000590627 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
GCDH-213ENST00000590627 GLI3P10071 1580 aa23.36■■□□□ 1.33
GCDH-213ENST00000590627 HAP1P54257 671 aaPredicted RBP23.36■■□□□ 1.33
GCDH-213ENST00000590627 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.33
GCDH-213ENST00000590627 USP47Q96K76 1375 aa23.35■■□□□ 1.33
GCDH-213ENST00000590627 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
GCDH-213ENST00000590627 NWD2Q9ULI1 1742 aa23.34■■□□□ 1.33
GCDH-213ENST00000590627 EIF3AQ14152 1382 aaKnown RBP23.34■■□□□ 1.33
GCDH-213ENST00000590627 CABLES1Q8TDN4 633 aa23.32■■□□□ 1.32
GCDH-213ENST00000590627 TRAK1Q9UPV9 953 aa23.32■■□□□ 1.32
GCDH-213ENST00000590627 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
GCDH-213ENST00000590627 LMOD2Q6P5Q4 547 aa23.31■■□□□ 1.32
GCDH-213ENST00000590627 PMFBP1Q8TBY8 1022 aa23.31■■□□□ 1.32
GCDH-213ENST00000590627 HSPA5P11021 654 aaKnown RBP23.3■■□□□ 1.32
GCDH-213ENST00000590627 VPS72Q15906 364 aa23.3■■□□□ 1.32
GCDH-213ENST00000590627 TULP4Q9NRJ4 1543 aa23.29■■□□□ 1.32
GCDH-213ENST00000590627 TRPM3Q9HCF6 1732 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms