RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
RFX1-207ENST00000589937 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
RFX1-207ENST00000589937 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
RFX1-207ENST00000589937 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
RFX1-207ENST00000589937 YTHDC2Q9H6S0 1430 aaKnown RBP18.8■□□□□ 0.6
RFX1-207ENST00000589937 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
RFX1-207ENST00000589937 WAPLQ7Z5K2 1190 aa18.79■□□□□ 0.6
RFX1-207ENST00000589937 COL22A1Q8NFW1 1626 aaPredicted RBP18.76■□□□□ 0.59
RFX1-207ENST00000589937 PXDNQ92626 1479 aa18.75■□□□□ 0.59
RFX1-207ENST00000589937 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
RFX1-207ENST00000589937 ABCC11Q96J66 1382 aa18.74■□□□□ 0.59
RFX1-207ENST00000589937 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
RFX1-207ENST00000589937 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
RFX1-207ENST00000589937 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
RFX1-207ENST00000589937 KIF1AQ12756 1690 aa18.73■□□□□ 0.59
RFX1-207ENST00000589937 USP32Q8NFA0 1604 aa18.72■□□□□ 0.59
RFX1-207ENST00000589937 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
RFX1-207ENST00000589937 XPCQ01831 940 aaPredicted RBP18.71■□□□□ 0.59
RFX1-207ENST00000589937 LRRC59Q96AG4 307 aaKnown RBP18.71■□□□□ 0.59
RFX1-207ENST00000589937 AFF2P51816 1311 aa18.71■□□□□ 0.59
RFX1-207ENST00000589937 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
RFX1-207ENST00000589937 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
RFX1-207ENST00000589937 ESCO1Q5FWF5 840 aa18.69■□□□□ 0.58
RFX1-207ENST00000589937 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
RFX1-207ENST00000589937 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
RFX1-207ENST00000589937 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
RFX1-207ENST00000589937 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
RFX1-207ENST00000589937 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
RFX1-207ENST00000589937 ABCA3Q99758 1704 aa18.68■□□□□ 0.58
RFX1-207ENST00000589937 ADAMTS2O95450 1211 aa18.66■□□□□ 0.58
RFX1-207ENST00000589937 ZNF772Q68DY9 489 aaPredicted RBP18.65■□□□□ 0.58
RFX1-207ENST00000589937 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
RFX1-207ENST00000589937 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
RFX1-207ENST00000589937 FOXO3O43524 673 aa18.64■□□□□ 0.57
RFX1-207ENST00000589937 PRAM1Q96QH2 718 aa18.64■□□□□ 0.57
RFX1-207ENST00000589937 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
RFX1-207ENST00000589937 RGS12O14924 1447 aa18.63■□□□□ 0.57
RFX1-207ENST00000589937 DCAF11Q8TEB1 546 aa18.62■□□□□ 0.57
RFX1-207ENST00000589937 TRPM3Q9HCF6 1732 aaPredicted RBP18.61■□□□□ 0.57
RFX1-207ENST00000589937 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
RFX1-207ENST00000589937 CDK12Q9NYV4 1490 aaPredicted RBP18.58■□□□□ 0.57
RFX1-207ENST00000589937 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.57
RFX1-207ENST00000589937 PLCH1Q4KWH8 1693 aa18.58■□□□□ 0.57
RFX1-207ENST00000589937 HRCP23327 699 aa18.58■□□□□ 0.56
RFX1-207ENST00000589937 RXRBP28702 533 aa18.58■□□□□ 0.56
RFX1-207ENST00000589937 HIRIP3Q9BW71 556 aaPredicted RBP18.58■□□□□ 0.56
RFX1-207ENST00000589937 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.57■□□□□ 0.56
RFX1-207ENST00000589937 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
RFX1-207ENST00000589937 NGLY1Q96IV0 654 aa18.57■□□□□ 0.56
RFX1-207ENST00000589937 MINK1Q8N4C8 1332 aaPredicted RBP18.56■□□□□ 0.56
RFX1-207ENST00000589937 TULP4Q9NRJ4 1543 aa18.56■□□□□ 0.56
RFX1-207ENST00000589937 POGKQ9P215 609 aa18.56■□□□□ 0.56
RFX1-207ENST00000589937 ITSN1Q15811 1721 aa18.56■□□□□ 0.56
RFX1-207ENST00000589937 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
RFX1-207ENST00000589937 TNS3Q68CZ2 1445 aa18.55■□□□□ 0.56
RFX1-207ENST00000589937 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
RFX1-207ENST00000589937 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
RFX1-207ENST00000589937 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
RFX1-207ENST00000589937 QTRT2Q9H974 415 aaKnown RBP18.54■□□□□ 0.56
RFX1-207ENST00000589937 PHF8Q9UPP1 1060 aa18.54■□□□□ 0.56
RFX1-207ENST00000589937 ANKARQ7Z5J8 1434 aa18.54■□□□□ 0.56
RFX1-207ENST00000589937 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
RFX1-207ENST00000589937 ATRNO75882 1429 aa18.53■□□□□ 0.56
RFX1-207ENST00000589937 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
RFX1-207ENST00000589937 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.56
RFX1-207ENST00000589937 KRT28Q7Z3Y7 464 aa18.52■□□□□ 0.56
RFX1-207ENST00000589937 USP21Q9UK80 565 aa18.52■□□□□ 0.56
RFX1-207ENST00000589937 PMFBP1Q8TBY8 1022 aa18.51■□□□□ 0.55
RFX1-207ENST00000589937 EP400Q96L91 3159 aa18.51■□□□□ 0.55
RFX1-207ENST00000589937 ATP7BP35670 1465 aa18.51■□□□□ 0.55
RFX1-207ENST00000589937 GLI3P10071 1580 aa18.51■□□□□ 0.55
RFX1-207ENST00000589937 RBM6P78332 1123 aaKnown RBP18.5■□□□□ 0.55
RFX1-207ENST00000589937 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
RFX1-207ENST00000589937 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
RFX1-207ENST00000589937 BRWD3Q6RI45 1802 aa18.49■□□□□ 0.55
RFX1-207ENST00000589937 FNBP4Q8N3X1 1017 aaPredicted RBP18.49■□□□□ 0.55
RFX1-207ENST00000589937 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
RFX1-207ENST00000589937 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
RFX1-207ENST00000589937 NWD2Q9ULI1 1742 aa18.48■□□□□ 0.55
RFX1-207ENST00000589937 SLIT2O94813 1529 aa18.48■□□□□ 0.55
RFX1-207ENST00000589937 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
RFX1-207ENST00000589937 SBNO1A3KN83 1393 aa18.46■□□□□ 0.55
RFX1-207ENST00000589937 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
RFX1-207ENST00000589937 NBPF1Q3BBV0 1214 aa18.45■□□□□ 0.54
RFX1-207ENST00000589937 TRPC5Q9UL62 973 aaPredicted RBP18.45■□□□□ 0.54
RFX1-207ENST00000589937 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
RFX1-207ENST00000589937 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
RFX1-207ENST00000589937 PSME1Q06323 249 aa18.43■□□□□ 0.54
RFX1-207ENST00000589937 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
RFX1-207ENST00000589937 EIF3AQ14152 1382 aaKnown RBP18.42■□□□□ 0.54
RFX1-207ENST00000589937 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
RFX1-207ENST00000589937 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
RFX1-207ENST00000589937 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
RFX1-207ENST00000589937 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
RFX1-207ENST00000589937 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
RFX1-207ENST00000589937 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
RFX1-207ENST00000589937 UNC5CLQ8IV45 518 aa18.37■□□□□ 0.53
RFX1-207ENST00000589937 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
RFX1-207ENST00000589937 NUDT16Q96DE0 195 aaKnown RBP18.37■□□□□ 0.53
RFX1-207ENST00000589937 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms