RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-215	ENST00000589883	SOS2	Q07890	1332 aa	Predicted RBP	28.37	■■■□□ 2.13
PTBP1-215	ENST00000589883	ADGRF5	Q8IZF2	1346 aa		28.35	■■■□□ 2.13
PTBP1-215	ENST00000589883	SPATA31E1	Q6ZUB1	1445 aa		28.34	■■■□□ 2.13
PTBP1-215	ENST00000589883	NGLY1	Q96IV0	654 aa		28.32	■■■□□ 2.12
PTBP1-215	ENST00000589883	QTRT2	Q9H974	415 aa	Known RBP	28.31	■■■□□ 2.12
PTBP1-215	ENST00000589883	NPHP3	Q7Z494	1330 aa		28.31	■■■□□ 2.12
PTBP1-215	ENST00000589883	CDC42BPG	Q6DT37	1551 aa		28.31	■■■□□ 2.12
PTBP1-215	ENST00000589883	LRPPRC	P42704	1394 aa	Known RBP	28.3	■■■□□ 2.12
PTBP1-215	ENST00000589883	RBM6	P78332	1123 aa	Known RBP	28.3	■■■□□ 2.12
PTBP1-215	ENST00000589883	ESCO1	Q5FWF5	840 aa		28.3	■■■□□ 2.12
PTBP1-215	ENST00000589883	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.3	■■■□□ 2.12
PTBP1-215	ENST00000589883	STK26	Q9P289	416 aa		28.3	■■■□□ 2.12
PTBP1-215	ENST00000589883	TECPR2	O15040	1411 aa		28.29	■■■□□ 2.12
PTBP1-215	ENST00000589883	ADAMTS2	O95450	1211 aa		28.29	■■■□□ 2.12
PTBP1-215	ENST00000589883	DHX57	Q6P158	1386 aa	Known RBP	28.28	■■■□□ 2.12
PTBP1-215	ENST00000589883	ABCC11	Q96J66	1382 aa		28.28	■■■□□ 2.12
PTBP1-215	ENST00000589883	IFT172	Q9UG01	1749 aa		28.27	■■■□□ 2.12
PTBP1-215	ENST00000589883	PIK3C2G	O75747	1445 aa		28.25	■■■□□ 2.11
PTBP1-215	ENST00000589883	WAPL	Q7Z5K2	1190 aa		28.23	■■■□□ 2.11
PTBP1-215	ENST00000589883	TMEM132E	Q6IEE7	984 aa		28.22	■■■□□ 2.11
PTBP1-215	ENST00000589883	KNDC1	Q76NI1	1749 aa		28.22	■■■□□ 2.11
PTBP1-215	ENST00000589883	USP21	Q9UK80	565 aa		28.21	■■■□□ 2.11
PTBP1-215	ENST00000589883	FOXO3	O43524	673 aa		28.2	■■■□□ 2.1
PTBP1-215	ENST00000589883	SIRT1	Q96EB6	747 aa		28.2	■■■□□ 2.1
PTBP1-215	ENST00000589883	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.19	■■■□□ 2.1
PTBP1-215	ENST00000589883	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.19	■■■□□ 2.1
PTBP1-215	ENST00000589883	TRPC5	Q9UL62	973 aa	Predicted RBP	28.19	■■■□□ 2.1
PTBP1-215	ENST00000589883	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.17	■■■□□ 2.1
PTBP1-215	ENST00000589883	C14orf93	Q9H972	538 aa	Known RBP	28.17	■■■□□ 2.1
PTBP1-215	ENST00000589883	RGS12	O14924	1447 aa		28.17	■■■□□ 2.1
PTBP1-215	ENST00000589883	PXDN	Q92626	1479 aa		28.16	■■■□□ 2.1
PTBP1-215	ENST00000589883	NUTM2F	A1L443	756 aa		28.16	■■■□□ 2.1
PTBP1-215	ENST00000589883	MYOM2	P54296	1465 aa		28.14	■■■□□ 2.09
PTBP1-215	ENST00000589883	PLEKHH1	Q9ULM0	1364 aa		28.13	■■■□□ 2.09
PTBP1-215	ENST00000589883	XPC	Q01831	940 aa	Predicted RBP	28.12	■■■□□ 2.09
PTBP1-215	ENST00000589883	NRXN1	Q9ULB1	1477 aa		28.11	■■■□□ 2.09
PTBP1-215	ENST00000589883	KIF1A	Q12756	1690 aa		28.1	■■■□□ 2.09
PTBP1-215	ENST00000589883	FMN2	Q9NZ56	1722 aa		28.1	■■■□□ 2.09
PTBP1-215	ENST00000589883	CFAP70	Q5T0N1	1121 aa		28.09	■■■□□ 2.09
PTBP1-215	ENST00000589883	SIN3A	Q96ST3	1273 aa		28.08	■■■□□ 2.09
PTBP1-215	ENST00000589883	ATAD2	Q6PL18	1390 aa		28.07	■■■□□ 2.08
PTBP1-215	ENST00000589883	ATRN	O75882	1429 aa		28.07	■■■□□ 2.08
PTBP1-215	ENST00000589883	PSME1	Q06323	249 aa		28.06	■■■□□ 2.08
PTBP1-215	ENST00000589883	SPATA31A3	Q5VYP0	1347 aa		28.06	■■■□□ 2.08
PTBP1-215	ENST00000589883	KRT28	Q7Z3Y7	464 aa		28.05	■■■□□ 2.08
PTBP1-215	ENST00000589883	MARF1	Q9Y4F3	1742 aa	Known RBP	28.05	■■■□□ 2.08
PTBP1-215	ENST00000589883	NEUROD1	Q13562	356 aa		28.04	■■■□□ 2.08
PTBP1-215	ENST00000589883	PHF8	Q9UPP1	1060 aa		28.04	■■■□□ 2.08
PTBP1-215	ENST00000589883	PRAM1	Q96QH2	718 aa		28.03	■■■□□ 2.08
PTBP1-215	ENST00000589883	POGK	Q9P215	609 aa		28.03	■■■□□ 2.08
PTBP1-215	ENST00000589883	STAC3	Q96MF2	364 aa		28.01	■■■□□ 2.07
PTBP1-215	ENST00000589883	CCER1	Q8TC90	406 aa	Predicted RBP	28	■■■□□ 2.07
PTBP1-215	ENST00000589883	DLC1	Q96QB1	1528 aa		28	■■■□□ 2.07
PTBP1-215	ENST00000589883	BCL9L	Q86UU0	1499 aa		28	■■■□□ 2.07
PTBP1-215	ENST00000589883	HAP1	P54257	671 aa	Predicted RBP	27.99	■■■□□ 2.07
PTBP1-215	ENST00000589883	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.98	■■■□□ 2.07
PTBP1-215	ENST00000589883	GJD4	Q96KN9	370 aa	Predicted RBP	27.98	■■■□□ 2.07
PTBP1-215	ENST00000589883	TNS3	Q68CZ2	1445 aa		27.96	■■■□□ 2.07
PTBP1-215	ENST00000589883	UNC5CL	Q8IV45	518 aa		27.96	■■■□□ 2.07
PTBP1-215	ENST00000589883	RGPD8	O14715	1765 aa	Predicted RBP	27.96	■■■□□ 2.07
PTBP1-215	ENST00000589883	ANKAR	Q7Z5J8	1434 aa		27.95	■■■□□ 2.07
PTBP1-215	ENST00000589883	SBNO1	A3KN83	1393 aa		27.95	■■■□□ 2.06
PTBP1-215	ENST00000589883	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	27.94	■■■□□ 2.06
PTBP1-215	ENST00000589883	EIF3A	Q14152	1382 aa	Known RBP	27.94	■■■□□ 2.06
PTBP1-215	ENST00000589883	ARHGEF10	O15013	1369 aa		27.93	■■■□□ 2.06
PTBP1-215	ENST00000589883	CCDC125	Q86Z20	511 aa		27.92	■■■□□ 2.06
PTBP1-215	ENST00000589883	DCAF11	Q8TEB1	546 aa		27.92	■■■□□ 2.06
PTBP1-215	ENST00000589883	KDM2A	Q9Y2K7	1162 aa		27.92	■■■□□ 2.06
PTBP1-215	ENST00000589883	SLIT2	O94813	1529 aa		27.92	■■■□□ 2.06
PTBP1-215	ENST00000589883	LMOD2	Q6P5Q4	547 aa		27.91	■■■□□ 2.06
PTBP1-215	ENST00000589883	TRAK1	Q9UPV9	953 aa		27.91	■■■□□ 2.06
PTBP1-215	ENST00000589883	USP32	Q8NFA0	1604 aa		27.91	■■■□□ 2.06
PTBP1-215	ENST00000589883	ADGRB1	O14514	1584 aa		27.9	■■■□□ 2.06
PTBP1-215	ENST00000589883	ADGRB2	O60241	1585 aa		27.9	■■■□□ 2.06
PTBP1-215	ENST00000589883	PMFBP1	Q8TBY8	1022 aa		27.87	■■■□□ 2.05
PTBP1-215	ENST00000589883	CLSPN	Q9HAW4	1339 aa		27.87	■■■□□ 2.05
PTBP1-215	ENST00000589883	L3MBTL2	Q969R5	705 aa		27.86	■■■□□ 2.05
PTBP1-215	ENST00000589883	GPRASP1	Q5JY77	1395 aa		27.86	■■■□□ 2.05
PTBP1-215	ENST00000589883	RALGAPB	Q86X10	1494 aa		27.85	■■■□□ 2.05
PTBP1-215	ENST00000589883	CABLES1	Q8TDN4	633 aa		27.84	■■■□□ 2.05
PTBP1-215	ENST00000589883	HIRIP3	Q9BW71	556 aa	Predicted RBP	27.84	■■■□□ 2.05
PTBP1-215	ENST00000589883	MINK1	Q8N4C8	1332 aa	Predicted RBP	27.84	■■■□□ 2.05
PTBP1-215	ENST00000589883	TONSL	Q96HA7	1378 aa		27.83	■■■□□ 2.05
PTBP1-215	ENST00000589883	WASL	O00401	505 aa	Predicted RBP	27.82	■■■□□ 2.04
PTBP1-215	ENST00000589883	PLEKHG5	O94827	1062 aa		27.82	■■■□□ 2.04
PTBP1-215	ENST00000589883	VPS72	Q15906	364 aa		27.82	■■■□□ 2.04
PTBP1-215	ENST00000589883	NWD2	Q9ULI1	1742 aa		27.81	■■■□□ 2.04
PTBP1-215	ENST00000589883	CCDC9	Q9Y3X0	531 aa	Known RBP	27.8	■■■□□ 2.04
PTBP1-215	ENST00000589883	TULP4	Q9NRJ4	1543 aa		27.8	■■■□□ 2.04
PTBP1-215	ENST00000589883	GLI3	P10071	1580 aa		27.8	■■■□□ 2.04
PTBP1-215	ENST00000589883	ZRANB1	Q9UGI0	708 aa		27.79	■■■□□ 2.04
PTBP1-215	ENST00000589883	NGDN	Q8NEJ9	315 aa	Known RBP	27.77	■■■□□ 2.04
PTBP1-215	ENST00000589883	EP400	Q96L91	3159 aa		27.77	■■■□□ 2.04
PTBP1-215	ENST00000589883	ABCA3	Q99758	1704 aa		27.76	■■■□□ 2.03
PTBP1-215	ENST00000589883	PLCH1	Q4KWH8	1693 aa		27.75	■■■□□ 2.03
PTBP1-215	ENST00000589883	SEPT12	Q8IYM1	358 aa		27.75	■■■□□ 2.03
PTBP1-215	ENST00000589883	PRR36	Q9H6K5	1346 aa		27.74	■■■□□ 2.03
PTBP1-215	ENST00000589883	FAM83G	A6ND36	823 aa		27.74	■■■□□ 2.03
PTBP1-215	ENST00000589883	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.73	■■■□□ 2.03
PTBP1-215	ENST00000589883	BLM	P54132	1417 aa	Predicted RBP	27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms