RNA–Protein interactions for RNA: ENST00000589851.1

PTPRS-207, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5

Gene PTPRS, Length 1,270 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-207ENST00000589851 PRAM1Q96QH2 718 aa22.78■■□□□ 1.24
PTPRS-207ENST00000589851 BRINP3Q76B58 766 aa22.77■■□□□ 1.24
PTPRS-207ENST00000589851 C1orf167Q5SNV9 1468 aa22.77■■□□□ 1.24
PTPRS-207ENST00000589851 POGKQ9P215 609 aa22.76■■□□□ 1.23
PTPRS-207ENST00000589851 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
PTPRS-207ENST00000589851 PHLPP1O60346 1717 aa22.75■■□□□ 1.23
PTPRS-207ENST00000589851 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
PTPRS-207ENST00000589851 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
PTPRS-207ENST00000589851 AHDC1Q5TGY3 1603 aaPredicted RBP22.73■■□□□ 1.23
PTPRS-207ENST00000589851 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
PTPRS-207ENST00000589851 TRPM1Q7Z4N2 1603 aa22.72■■□□□ 1.23
PTPRS-207ENST00000589851 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.23
PTPRS-207ENST00000589851 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
PTPRS-207ENST00000589851 COL16A1Q07092 1604 aaPredicted RBP22.7■■□□□ 1.22
PTPRS-207ENST00000589851 NHSL1Q5SYE7 1610 aa22.69■■□□□ 1.22
PTPRS-207ENST00000589851 ADGRB2O60241 1585 aa22.69■■□□□ 1.22
PTPRS-207ENST00000589851 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
PTPRS-207ENST00000589851 NBPF8Q3BBV2 869 aa22.68■■□□□ 1.22
PTPRS-207ENST00000589851 MINK1Q8N4C8 1332 aaPredicted RBP22.65■■□□□ 1.22
PTPRS-207ENST00000589851 ESCO1Q5FWF5 840 aa22.65■■□□□ 1.22
PTPRS-207ENST00000589851 NUTM2FA1L443 756 aa22.64■■□□□ 1.21
PTPRS-207ENST00000589851 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
PTPRS-207ENST00000589851 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
PTPRS-207ENST00000589851 RGPD8O14715 1765 aaPredicted RBP22.63■■□□□ 1.21
PTPRS-207ENST00000589851 JCADQ9P266 1359 aa22.63■■□□□ 1.21
PTPRS-207ENST00000589851 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
PTPRS-207ENST00000589851 WASLO00401 505 aaPredicted RBP22.61■■□□□ 1.21
PTPRS-207ENST00000589851 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
PTPRS-207ENST00000589851 MED1Q15648 1581 aaPredicted RBP22.6■■□□□ 1.21
PTPRS-207ENST00000589851 ANKARQ7Z5J8 1434 aa22.6■■□□□ 1.21
PTPRS-207ENST00000589851 TIMELESSQ9UNS1 1208 aa22.6■■□□□ 1.21
PTPRS-207ENST00000589851 CENPJQ9HC77 1338 aaPredicted RBP22.59■■□□□ 1.21
PTPRS-207ENST00000589851 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
PTPRS-207ENST00000589851 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
PTPRS-207ENST00000589851 EIF3AQ14152 1382 aaKnown RBP22.59■■□□□ 1.21
PTPRS-207ENST00000589851 KIF1AQ12756 1690 aa22.58■■□□□ 1.21
PTPRS-207ENST00000589851 SOS2Q07890 1332 aaPredicted RBP22.58■■□□□ 1.21
PTPRS-207ENST00000589851 NPHP3Q7Z494 1330 aa22.58■■□□□ 1.21
PTPRS-207ENST00000589851 USP32Q8NFA0 1604 aa22.58■■□□□ 1.21
PTPRS-207ENST00000589851 RALGAPBQ86X10 1494 aa22.58■■□□□ 1.2
PTPRS-207ENST00000589851 SHPRHQ149N8 1683 aa22.58■■□□□ 1.2
PTPRS-207ENST00000589851 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
PTPRS-207ENST00000589851 DISP3Q9P2K9 1392 aa22.56■■□□□ 1.2
PTPRS-207ENST00000589851 FOXO3O43524 673 aa22.56■■□□□ 1.2
PTPRS-207ENST00000589851 PHF8Q9UPP1 1060 aa22.55■■□□□ 1.2
PTPRS-207ENST00000589851 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
PTPRS-207ENST00000589851 CARD11Q9BXL7 1154 aa22.54■■□□□ 1.2
PTPRS-207ENST00000589851 SPATA31A6Q5VVP1 1343 aa22.54■■□□□ 1.2
PTPRS-207ENST00000589851 PXDNQ92626 1479 aa22.54■■□□□ 1.2
PTPRS-207ENST00000589851 CDK19Q9BWU1 502 aa22.53■■□□□ 1.2
PTPRS-207ENST00000589851 PRR36Q9H6K5 1346 aa22.53■■□□□ 1.2
PTPRS-207ENST00000589851 NUDT16Q96DE0 195 aaKnown RBP22.5■■□□□ 1.19
PTPRS-207ENST00000589851 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
PTPRS-207ENST00000589851 ATP7BP35670 1465 aa22.49■■□□□ 1.19
PTPRS-207ENST00000589851 ITSN1Q15811 1721 aa22.49■■□□□ 1.19
PTPRS-207ENST00000589851 XPCQ01831 940 aaPredicted RBP22.48■■□□□ 1.19
PTPRS-207ENST00000589851 PMFBP1Q8TBY8 1022 aa22.48■■□□□ 1.19
PTPRS-207ENST00000589851 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
PTPRS-207ENST00000589851 PSME1Q06323 249 aa22.46■■□□□ 1.19
PTPRS-207ENST00000589851 LRP6O75581 1613 aa22.44■■□□□ 1.18
PTPRS-207ENST00000589851 SRPK2P78362 688 aaKnown RBP22.44■■□□□ 1.18
PTPRS-207ENST00000589851 EVC2Q86UK5 1308 aa22.44■■□□□ 1.18
PTPRS-207ENST00000589851 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
PTPRS-207ENST00000589851 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
PTPRS-207ENST00000589851 SBNO2Q9Y2G9 1366 aa22.44■■□□□ 1.18
PTPRS-207ENST00000589851 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
PTPRS-207ENST00000589851 COL22A1Q8NFW1 1626 aaPredicted RBP22.43■■□□□ 1.18
PTPRS-207ENST00000589851 SPATA31A3Q5VYP0 1347 aa22.43■■□□□ 1.18
PTPRS-207ENST00000589851 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
PTPRS-207ENST00000589851 PLEKHG3A1L390 1219 aa22.41■■□□□ 1.18
PTPRS-207ENST00000589851 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
PTPRS-207ENST00000589851 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
PTPRS-207ENST00000589851 NUTM2AQ8IVF1 878 aaPredicted RBP22.41■■□□□ 1.18
PTPRS-207ENST00000589851 NGDNQ8NEJ9 315 aaKnown RBP22.41■■□□□ 1.18
PTPRS-207ENST00000589851 CABP2Q9NPB3 220 aa22.41■■□□□ 1.18
PTPRS-207ENST00000589851 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
PTPRS-207ENST00000589851 POLR3AO14802 1390 aaPredicted RBP22.38■■□□□ 1.17
PTPRS-207ENST00000589851 TRPM3Q9HCF6 1732 aaPredicted RBP22.38■■□□□ 1.17
PTPRS-207ENST00000589851 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
PTPRS-207ENST00000589851 RGS17Q9UGC6 210 aaPredicted RBP22.37■■□□□ 1.17
PTPRS-207ENST00000589851 ACEP12821 1306 aa22.36■■□□□ 1.17
PTPRS-207ENST00000589851 PPIP5K1Q6PFW1 1433 aa22.36■■□□□ 1.17
PTPRS-207ENST00000589851 ST20-MTHFSA0A0A6YYL1 179 aa22.35■■□□□ 1.17
PTPRS-207ENST00000589851 ARHGEF10O15013 1369 aa22.35■■□□□ 1.17
PTPRS-207ENST00000589851 ALS2Q96Q42 1657 aa22.33■■□□□ 1.17
PTPRS-207ENST00000589851 SLC24A1O60721 1099 aa22.33■■□□□ 1.17
PTPRS-207ENST00000589851 TESK2Q96S53 571 aa22.33■■□□□ 1.17
PTPRS-207ENST00000589851 CABP1Q9NZU7 370 aa22.33■■□□□ 1.17
PTPRS-207ENST00000589851 USP47Q96K76 1375 aa22.33■■□□□ 1.17
PTPRS-207ENST00000589851 ILDR2Q71H61 639 aa22.32■■□□□ 1.16
PTPRS-207ENST00000589851 ATAD2Q6PL18 1390 aa22.32■■□□□ 1.16
PTPRS-207ENST00000589851 LMOD2Q6P5Q4 547 aa22.31■■□□□ 1.16
PTPRS-207ENST00000589851 ADAMTS2O95450 1211 aa22.3■■□□□ 1.16
PTPRS-207ENST00000589851 PUS7Q96PZ0 661 aaKnown RBP22.3■■□□□ 1.16
PTPRS-207ENST00000589851 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
PTPRS-207ENST00000589851 PAK3O75914 559 aaPredicted RBP22.29■■□□□ 1.16
PTPRS-207ENST00000589851 C8orf37Q96NL8 207 aa22.28■■□□□ 1.16
PTPRS-207ENST00000589851 BRD4O60885 1362 aaPredicted RBP22.27■■□□□ 1.16
PTPRS-207ENST00000589851 ZNF772Q68DY9 489 aaPredicted RBP22.27■■□□□ 1.16
PTPRS-207ENST00000589851 POTEAQ6S8J7 498 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms