RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 COL22A1Q8NFW1 1626 aaPredicted RBP35.39■■■■□ 3.26
LSM7-205ENST00000589532 NUTM2BA6NNL0 878 aaPredicted RBP35.39■■■■□ 3.26
LSM7-205ENST00000589532 NUTM2EB1AL46 878 aaPredicted RBP35.39■■■■□ 3.26
LSM7-205ENST00000589532 NUTM2AQ8IVF1 878 aaPredicted RBP35.39■■■■□ 3.26
LSM7-205ENST00000589532 ABCC11Q96J66 1382 aa35.38■■■■□ 3.26
LSM7-205ENST00000589532 RAB3GAP2Q9H2M9 1393 aa35.38■■■■□ 3.26
LSM7-205ENST00000589532 CDK12Q9NYV4 1490 aaPredicted RBP35.35■■■■□ 3.25
LSM7-205ENST00000589532 FMN2Q9NZ56 1722 aa35.35■■■■□ 3.25
LSM7-205ENST00000589532 YTHDC2Q9H6S0 1430 aaKnown RBP35.34■■■■□ 3.25
LSM7-205ENST00000589532 PLEKHH1Q9ULM0 1364 aa35.34■■■■□ 3.25
LSM7-205ENST00000589532 PXDNQ92626 1479 aa35.34■■■■□ 3.25
LSM7-205ENST00000589532 AFF2P51816 1311 aa35.33■■■■□ 3.25
LSM7-205ENST00000589532 TMEM132EQ6IEE7 984 aa35.29■■■■□ 3.24
LSM7-205ENST00000589532 WAPLQ7Z5K2 1190 aa35.29■■■■□ 3.24
LSM7-205ENST00000589532 STK26Q9P289 416 aa35.27■■■■□ 3.24
LSM7-205ENST00000589532 C14orf93Q9H972 538 aaKnown RBP35.24■■■■□ 3.23
LSM7-205ENST00000589532 KIF1AQ12756 1690 aa35.24■■■■□ 3.23
LSM7-205ENST00000589532 NPHP3Q7Z494 1330 aa35.23■■■■□ 3.23
LSM7-205ENST00000589532 RXRBP28702 533 aa35.22■■■■□ 3.23
LSM7-205ENST00000589532 C8orf37Q96NL8 207 aa35.22■■■■□ 3.23
LSM7-205ENST00000589532 ADGRB1O14514 1584 aa35.21■■■■□ 3.23
LSM7-205ENST00000589532 ESCO1Q5FWF5 840 aa35.2■■■■□ 3.23
LSM7-205ENST00000589532 RGS12O14924 1447 aa35.2■■■■□ 3.23
LSM7-205ENST00000589532 SIRT1Q96EB6 747 aa35.19■■■■□ 3.22
LSM7-205ENST00000589532 DLC1Q96QB1 1528 aa35.18■■■■□ 3.22
LSM7-205ENST00000589532 MARF1Q9Y4F3 1742 aaKnown RBP35.18■■■■□ 3.22
LSM7-205ENST00000589532 CFAP70Q5T0N1 1121 aa35.16■■■■□ 3.22
LSM7-205ENST00000589532 ADAMTS2O95450 1211 aa35.15■■■■□ 3.22
LSM7-205ENST00000589532 ADGRB2O60241 1585 aa35.14■■■■□ 3.22
LSM7-205ENST00000589532 UPF1Q92900 1129 aaKnown RBP eCLIP35.12■■■■□ 3.21
LSM7-205ENST00000589532 RGPD8O14715 1765 aaPredicted RBP35.12■■■■□ 3.21
LSM7-205ENST00000589532 DHX57Q6P158 1386 aaKnown RBP35.12■■■■□ 3.21
LSM7-205ENST00000589532 NUTM2FA1L443 756 aa35.11■■■■□ 3.21
LSM7-205ENST00000589532 FOXO3O43524 673 aa35.11■■■■□ 3.21
LSM7-205ENST00000589532 RBM6P78332 1123 aaKnown RBP35.09■■■■□ 3.21
LSM7-205ENST00000589532 USP32Q8NFA0 1604 aa35.09■■■■□ 3.21
LSM7-205ENST00000589532 XPCQ01831 940 aaPredicted RBP35.08■■■■□ 3.21
LSM7-205ENST00000589532 FNBP4Q8N3X1 1017 aaPredicted RBP35.08■■■■□ 3.21
LSM7-205ENST00000589532 NGLY1Q96IV0 654 aa35.08■■■■□ 3.21
LSM7-205ENST00000589532 QTRT2Q9H974 415 aaKnown RBP35.08■■■■□ 3.21
LSM7-205ENST00000589532 ATRNO75882 1429 aa35.06■■■■□ 3.2
LSM7-205ENST00000589532 HRCP23327 699 aa35.05■■■■□ 3.2
LSM7-205ENST00000589532 PRAM1Q96QH2 718 aa35.02■■■■□ 3.2
LSM7-205ENST00000589532 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.02■■■■□ 3.2
LSM7-205ENST00000589532 BCL9LQ86UU0 1499 aa35.02■■■■□ 3.2
LSM7-205ENST00000589532 SPATA31A3Q5VYP0 1347 aa35.01■■■■□ 3.19
LSM7-205ENST00000589532 USP21Q9UK80 565 aa35■■■■□ 3.19
LSM7-205ENST00000589532 ANKARQ7Z5J8 1434 aa34.99■■■■□ 3.19
LSM7-205ENST00000589532 ABCA3Q99758 1704 aa34.99■■■■□ 3.19
LSM7-205ENST00000589532 TNS3Q68CZ2 1445 aa34.98■■■■□ 3.19
LSM7-205ENST00000589532 EP400Q96L91 3159 aa34.96■■■■□ 3.19
LSM7-205ENST00000589532 TRPC5Q9UL62 973 aaPredicted RBP34.96■■■■□ 3.19
LSM7-205ENST00000589532 PHF8Q9UPP1 1060 aa34.94■■■■□ 3.18
LSM7-205ENST00000589532 SLIT2O94813 1529 aa34.94■■■■□ 3.18
LSM7-205ENST00000589532 ARHGEF28Q8N1W1 1705 aaKnown RBP34.94■■■■□ 3.18
LSM7-205ENST00000589532 SAFB2Q14151 953 aaKnown RBP eCLIP34.92■■■■□ 3.18
LSM7-205ENST00000589532 TRPM3Q9HCF6 1732 aaPredicted RBP34.92■■■■□ 3.18
LSM7-205ENST00000589532 KRT28Q7Z3Y7 464 aa34.91■■■■□ 3.18
LSM7-205ENST00000589532 TULP4Q9NRJ4 1543 aa34.9■■■■□ 3.18
LSM7-205ENST00000589532 SBNO1A3KN83 1393 aa34.89■■■■□ 3.18
LSM7-205ENST00000589532 DCAF11Q8TEB1 546 aa34.89■■■■□ 3.18
LSM7-205ENST00000589532 STAC3Q96MF2 364 aa34.88■■■■□ 3.17
LSM7-205ENST00000589532 POGKQ9P215 609 aa34.87■■■■□ 3.17
LSM7-205ENST00000589532 GLI3P10071 1580 aa34.87■■■■□ 3.17
LSM7-205ENST00000589532 TRAK1Q9UPV9 953 aa34.86■■■■□ 3.17
LSM7-205ENST00000589532 PLCH1Q4KWH8 1693 aa34.85■■■■□ 3.17
LSM7-205ENST00000589532 ALS2Q96Q42 1657 aa34.85■■■■□ 3.17
LSM7-205ENST00000589532 KDM2AQ9Y2K7 1162 aa34.84■■■■□ 3.17
LSM7-205ENST00000589532 PRR36Q9H6K5 1346 aa34.83■■■■□ 3.17
LSM7-205ENST00000589532 KIAA1210Q9ULL0 1709 aa34.83■■■■□ 3.17
LSM7-205ENST00000589532 NWD2Q9ULI1 1742 aa34.82■■■■□ 3.16
LSM7-205ENST00000589532 ATAD2Q6PL18 1390 aa34.82■■■■□ 3.16
LSM7-205ENST00000589532 EIF3AQ14152 1382 aaKnown RBP34.81■■■■□ 3.16
LSM7-205ENST00000589532 ARHGEF10O15013 1369 aa34.8■■■■□ 3.16
LSM7-205ENST00000589532 RALGAPBQ86X10 1494 aa34.79■■■■□ 3.16
LSM7-205ENST00000589532 PSME1Q06323 249 aa34.79■■■■□ 3.16
LSM7-205ENST00000589532 HIRIP3Q9BW71 556 aaPredicted RBP34.79■■■■□ 3.16
LSM7-205ENST00000589532 CRYBG1Q9Y4K1 1723 aa34.78■■■■□ 3.16
LSM7-205ENST00000589532 MINK1Q8N4C8 1332 aaPredicted RBP34.78■■■■□ 3.16
LSM7-205ENST00000589532 ATP7BP35670 1465 aa34.78■■■■□ 3.16
LSM7-205ENST00000589532 ITSN1Q15811 1721 aa34.76■■■■□ 3.16
LSM7-205ENST00000589532 PMFBP1Q8TBY8 1022 aa34.76■■■■□ 3.16
LSM7-205ENST00000589532 GJD4Q96KN9 370 aaPredicted RBP34.76■■■■□ 3.16
LSM7-205ENST00000589532 UNC5CLQ8IV45 518 aa34.75■■■■□ 3.15
LSM7-205ENST00000589532 WASLO00401 505 aaPredicted RBP34.74■■■■□ 3.15
LSM7-205ENST00000589532 NRAPQ86VF7 1730 aa34.73■■■■□ 3.15
LSM7-205ENST00000589532 CABLES1Q8TDN4 633 aa34.73■■■■□ 3.15
LSM7-205ENST00000589532 TOPAZ1Q8N9V7 1692 aa34.73■■■■□ 3.15
LSM7-205ENST00000589532 BRWD3Q6RI45 1802 aa34.67■■■■□ 3.14
LSM7-205ENST00000589532 GPRASP1Q5JY77 1395 aa34.64■■■■□ 3.14
LSM7-205ENST00000589532 SRCAPQ6ZRS2 3230 aa34.64■■■■□ 3.14
LSM7-205ENST00000589532 COL14A1Q05707 1796 aaKnown RBP34.63■■■■□ 3.13
LSM7-205ENST00000589532 HAP1P54257 671 aaPredicted RBP34.62■■■■□ 3.13
LSM7-205ENST00000589532 VPS72Q15906 364 aa34.62■■■■□ 3.13
LSM7-205ENST00000589532 LMOD2Q6P5Q4 547 aa34.62■■■■□ 3.13
LSM7-205ENST00000589532 PHRF1Q9P1Y6 1649 aaKnown RBP34.59■■■■□ 3.13
LSM7-205ENST00000589532 FAM83GA6ND36 823 aa34.56■■■■□ 3.12
LSM7-205ENST00000589532 PLEKHG5O94827 1062 aa34.56■■■■□ 3.12
LSM7-205ENST00000589532 POLR3AO14802 1390 aaPredicted RBP34.55■■■■□ 3.12
LSM7-205ENST00000589532 NUDT16Q96DE0 195 aaKnown RBP34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms