RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
LINC01140-209ENST00000589455 ESCO1Q5FWF5 840 aa23.77■■□□□ 1.4
LINC01140-209ENST00000589455 NAIPQ13075 1403 aa23.76■■□□□ 1.39
LINC01140-209ENST00000589455 MYOM2P54296 1465 aa23.75■■□□□ 1.39
LINC01140-209ENST00000589455 LRPPRCP42704 1394 aaKnown RBP23.75■■□□□ 1.39
LINC01140-209ENST00000589455 COL22A1Q8NFW1 1626 aaPredicted RBP23.74■■□□□ 1.39
LINC01140-209ENST00000589455 BCL9LQ86UU0 1499 aa23.74■■□□□ 1.39
LINC01140-209ENST00000589455 GJD4Q96KN9 370 aaPredicted RBP23.73■■□□□ 1.39
LINC01140-209ENST00000589455 FOXO3O43524 673 aa23.72■■□□□ 1.39
LINC01140-209ENST00000589455 KIF1BO60333 1816 aa23.72■■□□□ 1.39
LINC01140-209ENST00000589455 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
LINC01140-209ENST00000589455 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.38
LINC01140-209ENST00000589455 PXDNQ92626 1479 aa23.69■■□□□ 1.38
LINC01140-209ENST00000589455 RRBP1Q9P2E9 1410 aaKnown RBP23.69■■□□□ 1.38
LINC01140-209ENST00000589455 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
LINC01140-209ENST00000589455 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
LINC01140-209ENST00000589455 TECPR2O15040 1411 aa23.66■■□□□ 1.38
LINC01140-209ENST00000589455 XPCQ01831 940 aaPredicted RBP23.64■■□□□ 1.37
LINC01140-209ENST00000589455 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
LINC01140-209ENST00000589455 SPATA31A3Q5VYP0 1347 aa23.62■■□□□ 1.37
LINC01140-209ENST00000589455 WAPLQ7Z5K2 1190 aa23.62■■□□□ 1.37
LINC01140-209ENST00000589455 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
LINC01140-209ENST00000589455 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
LINC01140-209ENST00000589455 EP400Q96L91 3159 aa23.6■■□□□ 1.37
LINC01140-209ENST00000589455 BLMP54132 1417 aaPredicted RBP23.6■■□□□ 1.37
LINC01140-209ENST00000589455 SIRT1Q96EB6 747 aa23.6■■□□□ 1.37
LINC01140-209ENST00000589455 STK26Q9P289 416 aa23.6■■□□□ 1.37
LINC01140-209ENST00000589455 SLIT2O94813 1529 aa23.59■■□□□ 1.37
LINC01140-209ENST00000589455 NUTM2FA1L443 756 aa23.58■■□□□ 1.37
LINC01140-209ENST00000589455 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.36
LINC01140-209ENST00000589455 RALGAPBQ86X10 1494 aa23.57■■□□□ 1.36
LINC01140-209ENST00000589455 PPLO60437 1756 aa23.57■■□□□ 1.36
LINC01140-209ENST00000589455 KRT28Q7Z3Y7 464 aa23.56■■□□□ 1.36
LINC01140-209ENST00000589455 ONECUT3O60422 494 aaPredicted RBP23.55■■□□□ 1.36
LINC01140-209ENST00000589455 PSME1Q06323 249 aa23.55■■□□□ 1.36
LINC01140-209ENST00000589455 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
LINC01140-209ENST00000589455 SF3B2Q13435 895 aaKnown RBP23.54■■□□□ 1.36
LINC01140-209ENST00000589455 VPS72Q15906 364 aa23.54■■□□□ 1.36
LINC01140-209ENST00000589455 RGL3Q3MIN7 710 aa23.54■■□□□ 1.36
LINC01140-209ENST00000589455 TMEM132EQ6IEE7 984 aa23.53■■□□□ 1.36
LINC01140-209ENST00000589455 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
LINC01140-209ENST00000589455 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
LINC01140-209ENST00000589455 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.52■■□□□ 1.36
LINC01140-209ENST00000589455 MARF1Q9Y4F3 1742 aaKnown RBP23.51■■□□□ 1.35
LINC01140-209ENST00000589455 PHF8Q9UPP1 1060 aa23.51■■□□□ 1.35
LINC01140-209ENST00000589455 GLI3P10071 1580 aa23.5■■□□□ 1.35
LINC01140-209ENST00000589455 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
LINC01140-209ENST00000589455 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
LINC01140-209ENST00000589455 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
LINC01140-209ENST00000589455 DEFB132Q7Z7B7 95 aa23.48■■□□□ 1.35
LINC01140-209ENST00000589455 SBNO1A3KN83 1393 aa23.48■■□□□ 1.35
LINC01140-209ENST00000589455 TNS3Q68CZ2 1445 aa23.48■■□□□ 1.35
LINC01140-209ENST00000589455 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
LINC01140-209ENST00000589455 KIF1AQ12756 1690 aa23.47■■□□□ 1.35
LINC01140-209ENST00000589455 KRT27Q7Z3Y8 459 aa23.46■■□□□ 1.35
LINC01140-209ENST00000589455 MPHOSPH9Q99550 1183 aa23.46■■□□□ 1.35
LINC01140-209ENST00000589455 USP32Q8NFA0 1604 aa23.45■■□□□ 1.34
LINC01140-209ENST00000589455 ARHGEF10O15013 1369 aa23.45■■□□□ 1.34
LINC01140-209ENST00000589455 CABLES1Q8TDN4 633 aa23.44■■□□□ 1.34
LINC01140-209ENST00000589455 KNDC1Q76NI1 1749 aa23.43■■□□□ 1.34
LINC01140-209ENST00000589455 FMN2Q9NZ56 1722 aa23.43■■□□□ 1.34
LINC01140-209ENST00000589455 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
LINC01140-209ENST00000589455 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
LINC01140-209ENST00000589455 ACIN1Q9UKV3 1341 aaKnown RBP23.41■■□□□ 1.34
LINC01140-209ENST00000589455 NRXN1Q9ULB1 1477 aa23.41■■□□□ 1.34
LINC01140-209ENST00000589455 FAM83GA6ND36 823 aa23.4■■□□□ 1.34
LINC01140-209ENST00000589455 BAG6P46379 1132 aa23.39■■□□□ 1.33
LINC01140-209ENST00000589455 LMOD2Q6P5Q4 547 aa23.39■■□□□ 1.33
LINC01140-209ENST00000589455 PRAM1Q96QH2 718 aa23.37■■□□□ 1.33
LINC01140-209ENST00000589455 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
LINC01140-209ENST00000589455 CFAP70Q5T0N1 1121 aa23.36■■□□□ 1.33
LINC01140-209ENST00000589455 IFT172Q9UG01 1749 aa23.35■■□□□ 1.33
LINC01140-209ENST00000589455 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
LINC01140-209ENST00000589455 POGKQ9P215 609 aa23.33■■□□□ 1.33
LINC01140-209ENST00000589455 A0A0G2JS52 829 aa23.32■■□□□ 1.32
LINC01140-209ENST00000589455 PLEKHG5O94827 1062 aa23.32■■□□□ 1.32
LINC01140-209ENST00000589455 MYT1Q01538 1121 aa23.32■■□□□ 1.32
LINC01140-209ENST00000589455 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
LINC01140-209ENST00000589455 PMFBP1Q8TBY8 1022 aa23.32■■□□□ 1.32
LINC01140-209ENST00000589455 BTG4Q9NY30 223 aa23.32■■□□□ 1.32
LINC01140-209ENST00000589455 HRCP23327 699 aa23.31■■□□□ 1.32
LINC01140-209ENST00000589455 SAFB2Q14151 953 aaKnown RBP eCLIP23.31■■□□□ 1.32
LINC01140-209ENST00000589455 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
LINC01140-209ENST00000589455 LRP5O75197 1615 aa23.3■■□□□ 1.32
LINC01140-209ENST00000589455 GPRASP1Q5JY77 1395 aa23.3■■□□□ 1.32
LINC01140-209ENST00000589455 DLC1Q96QB1 1528 aa23.29■■□□□ 1.32
LINC01140-209ENST00000589455 EIF3AQ14152 1382 aaKnown RBP23.28■■□□□ 1.32
LINC01140-209ENST00000589455 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
LINC01140-209ENST00000589455 PSDA5PKW4 1024 aaPredicted RBP23.27■■□□□ 1.32
LINC01140-209ENST00000589455 SPATA31A5Q5VU36 1347 aa23.27■■□□□ 1.32
LINC01140-209ENST00000589455 SPATA31A7Q8IWB4 1347 aa23.27■■□□□ 1.32
LINC01140-209ENST00000589455 EN1Q05925 392 aaPredicted RBP23.24■■□□□ 1.31
LINC01140-209ENST00000589455 DISP2A7MBM2 1401 aa23.24■■□□□ 1.31
LINC01140-209ENST00000589455 ADGRB2O60241 1585 aa23.22■■□□□ 1.31
LINC01140-209ENST00000589455 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
LINC01140-209ENST00000589455 RGPD8O14715 1765 aaPredicted RBP23.22■■□□□ 1.31
LINC01140-209ENST00000589455 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
LINC01140-209ENST00000589455 PRR36Q9H6K5 1346 aa23.2■■□□□ 1.3
LINC01140-209ENST00000589455 NGDNQ8NEJ9 315 aaKnown RBP23.2■■□□□ 1.3
LINC01140-209ENST00000589455 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms