RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 MINK1Q8N4C8 1332 aaPredicted RBP34.43■■■■□ 3.1
RFX1-205ENST00000589239 PTCH1Q13635 1447 aa34.42■■■■□ 3.1
RFX1-205ENST00000589239 SLC24A1O60721 1099 aa34.42■■■■□ 3.1
RFX1-205ENST00000589239 DDX10Q13206 875 aaKnown RBP34.41■■■■□ 3.1
RFX1-205ENST00000589239 TULP4Q9NRJ4 1543 aa34.35■■■■□ 3.09
RFX1-205ENST00000589239 CDCA8Q53HL2 280 aa34.34■■■■□ 3.09
RFX1-205ENST00000589239 EVC2Q86UK5 1308 aa34.34■■■■□ 3.09
RFX1-205ENST00000589239 AEBP2Q6ZN18 517 aaPredicted RBP34.33■■■■□ 3.09
RFX1-205ENST00000589239 NWD1Q149M9 1564 aa34.33■■■■□ 3.09
RFX1-205ENST00000589239 DIEXFQ68CQ4 756 aaKnown RBP34.32■■■■□ 3.08
RFX1-205ENST00000589239 RBM33Q96EV2 1170 aaKnown RBP34.29■■■■□ 3.08
RFX1-205ENST00000589239 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.29■■■■□ 3.08
RFX1-205ENST00000589239 DMRT2Q9Y5R5 561 aa34.28■■■■□ 3.08
RFX1-205ENST00000589239 CABP2Q9NPB3 220 aa34.27■■■■□ 3.08
RFX1-205ENST00000589239 CDK19Q9BWU1 502 aa34.26■■■■□ 3.08
RFX1-205ENST00000589239 SRPK2P78362 688 aaKnown RBP34.25■■■■□ 3.07
RFX1-205ENST00000589239 STRCP1A6NGW2 1772 aa34.24■■■■□ 3.07
RFX1-205ENST00000589239 WASLO00401 505 aaPredicted RBP34.23■■■■□ 3.07
RFX1-205ENST00000589239 NKTRP30414 1462 aaKnown RBP34.22■■■■□ 3.07
RFX1-205ENST00000589239 ZNF335Q9H4Z2 1342 aaPredicted RBP34.21■■■■□ 3.07
RFX1-205ENST00000589239 PROSER2Q86WR7 435 aaPredicted RBP34.21■■■■□ 3.07
RFX1-205ENST00000589239 ADGRB2O60241 1585 aa34.19■■■■□ 3.06
RFX1-205ENST00000589239 PUS7Q96PZ0 661 aaKnown RBP34.19■■■■□ 3.06
RFX1-205ENST00000589239 MYT1Q01538 1121 aa34.15■■■■□ 3.06
RFX1-205ENST00000589239 MYOM1P52179 1685 aa34.14■■■■□ 3.06
RFX1-205ENST00000589239 TMC1Q8TDI8 760 aa34.14■■■■□ 3.06
RFX1-205ENST00000589239 NALCNQ8IZF0 1738 aa34.13■■■■□ 3.05
RFX1-205ENST00000589239 C14orf37Q86TY3 774 aa34.13■■■■□ 3.05
RFX1-205ENST00000589239 ATAD2Q6PL18 1390 aa34.13■■■■□ 3.05
RFX1-205ENST00000589239 ADGRL3Q9HAR2 1447 aa34.12■■■■□ 3.05
RFX1-205ENST00000589239 SLC12A5Q9H2X9 1139 aa34.12■■■■□ 3.05
RFX1-205ENST00000589239 TMEM94Q12767 1356 aa34.11■■■■□ 3.05
RFX1-205ENST00000589239 NUTM2FA1L443 756 aa34.1■■■■□ 3.05
RFX1-205ENST00000589239 PANK3Q9H999 370 aa34.1■■■■□ 3.05
RFX1-205ENST00000589239 NUDT16Q96DE0 195 aaKnown RBP34.07■■■■□ 3.05
RFX1-205ENST00000589239 PRR36Q9H6K5 1346 aa34.07■■■■□ 3.04
RFX1-205ENST00000589239 ATP7BP35670 1465 aa34.05■■■■□ 3.04
RFX1-205ENST00000589239 CDC42BPGQ6DT37 1551 aa34.04■■■■□ 3.04
RFX1-205ENST00000589239 CABP1Q9NZU7 370 aa34.04■■■■□ 3.04
RFX1-205ENST00000589239 LRRC7Q96NW7 1537 aa34.03■■■■□ 3.04
RFX1-205ENST00000589239 CCDC61Q9Y6R9 512 aa34.02■■■■□ 3.04
RFX1-205ENST00000589239 NINLQ9Y2I6 1382 aa34.01■■■■□ 3.04
RFX1-205ENST00000589239 NCOA3Q9Y6Q9 1424 aa34.01■■■■□ 3.03
RFX1-205ENST00000589239 C19orf44Q9H6X5 657 aa34.01■■■■□ 3.03
RFX1-205ENST00000589239 PPIP5K1Q6PFW1 1433 aa34■■■■□ 3.03
RFX1-205ENST00000589239 PER1O15534 1290 aaPredicted RBP34■■■■□ 3.03
RFX1-205ENST00000589239 USP32Q8NFA0 1604 aa33.98■■■■□ 3.03
RFX1-205ENST00000589239 FMN2Q9NZ56 1722 aa33.98■■■■□ 3.03
RFX1-205ENST00000589239 XIRP1Q702N8 1843 aaKnown RBP33.95■■■■□ 3.03
RFX1-205ENST00000589239 ANKRD36BQ8N2N9 1353 aa33.95■■■■□ 3.03
RFX1-205ENST00000589239 CARD14Q9BXL6 1004 aa33.95■■■■□ 3.03
RFX1-205ENST00000589239 CD163L1Q9NR16 1453 aa33.94■■■■□ 3.02
RFX1-205ENST00000589239 ANKARQ7Z5J8 1434 aa33.93■■■■□ 3.02
RFX1-205ENST00000589239 A0A1W2PP64 1363 aa33.93■■■■□ 3.02
RFX1-205ENST00000589239 CNGB1Q14028 1251 aaPredicted RBP33.92■■■■□ 3.02
RFX1-205ENST00000589239 TOPAZ1Q8N9V7 1692 aa33.92■■■■□ 3.02
RFX1-205ENST00000589239 MIER1Q8N108 512 aa33.91■■■■□ 3.02
RFX1-205ENST00000589239 TERF2IPQ9NYB0 399 aa33.91■■■■□ 3.02
RFX1-205ENST00000589239 MSH6P52701 1360 aa33.91■■■■□ 3.02
RFX1-205ENST00000589239 KNSTRNQ9Y448 316 aa33.91■■■■□ 3.02
RFX1-205ENST00000589239 RGPD8O14715 1765 aaPredicted RBP33.91■■■■□ 3.02
RFX1-205ENST00000589239 ATF3P18847 181 aa33.89■■■■□ 3.02
RFX1-205ENST00000589239 ANP32CO43423 234 aa33.89■■■■□ 3.02
RFX1-205ENST00000589239 DCCP43146 1447 aa33.88■■■■□ 3.01
RFX1-205ENST00000589239 HDGFL2Q7Z4V5 671 aaPredicted RBP33.88■■■■□ 3.01
RFX1-205ENST00000589239 NSD3Q9BZ95 1437 aa33.87■■■■□ 3.01
RFX1-205ENST00000589239 LTBP4Q8N2S1 1624 aa33.87■■■■□ 3.01
RFX1-205ENST00000589239 PMFBP1Q8TBY8 1022 aa33.87■■■■□ 3.01
RFX1-205ENST00000589239 PLEKHG3A1L390 1219 aa33.86■■■■□ 3.01
RFX1-205ENST00000589239 ITSN1Q15811 1721 aa33.85■■■■□ 3.01
RFX1-205ENST00000589239 CADPS2Q86UW7 1296 aa33.85■■■■□ 3.01
RFX1-205ENST00000589239 CPSF1Q10570 1443 aaKnown RBP33.84■■■■□ 3.01
RFX1-205ENST00000589239 ACEP12821 1306 aa33.83■■■■□ 3.01
RFX1-205ENST00000589239 AMER1Q5JTC6 1135 aaPredicted RBP33.82■■■■□ 3
RFX1-205ENST00000589239 CENPBP07199 599 aaPredicted RBP33.82■■■■□ 3
RFX1-205ENST00000589239 ESCO1Q5FWF5 840 aa33.82■■■■□ 3
RFX1-205ENST00000589239 MST1RQ04912 1400 aa33.81■■■■□ 3
RFX1-205ENST00000589239 CC2D1BQ5T0F9 858 aaKnown RBP33.81■■■■□ 3
RFX1-205ENST00000589239 KTN1Q86UP2 1357 aaKnown RBP33.8■■■■□ 3
RFX1-205ENST00000589239 PRKRIP1Q9H875 184 aaPredicted RBP33.8■■■■□ 3
RFX1-205ENST00000589239 C1orf167Q5SNV9 1468 aa33.8■■■■□ 3
RFX1-205ENST00000589239 ORAI2Q96SN7 254 aa33.79■■■■□ 3
RFX1-205ENST00000589239 NGDNQ8NEJ9 315 aaKnown RBP33.78■■■■□ 3
RFX1-205ENST00000589239 PHF8Q9UPP1 1060 aa33.78■■■■□ 3
RFX1-205ENST00000589239 ZNF692Q9BU19 519 aaPredicted RBP33.77■■■■□ 3
RFX1-205ENST00000589239 POLR3AO14802 1390 aaPredicted RBP33.77■■■■□ 3
RFX1-205ENST00000589239 AKAP12Q02952 1782 aa33.75■■■□□ 2.99
RFX1-205ENST00000589239 CGNL1Q0VF96 1302 aa33.74■■■□□ 2.99
RFX1-205ENST00000589239 MON2Q7Z3U7 1717 aa33.72■■■□□ 2.99
RFX1-205ENST00000589239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.72■■■□□ 2.99
RFX1-205ENST00000589239 GTF3C3Q9Y5Q9 886 aa33.72■■■□□ 2.99
RFX1-205ENST00000589239 EDC4Q6P2E9 1401 aaKnown RBP33.71■■■□□ 2.99
RFX1-205ENST00000589239 NPC1L1Q9UHC9 1359 aa33.71■■■□□ 2.99
RFX1-205ENST00000589239 USP6P35125 1406 aa33.71■■■□□ 2.99
RFX1-205ENST00000589239 SLAIN2Q9P270 581 aa33.68■■■□□ 2.98
RFX1-205ENST00000589239 PARD3Q8TEW0 1356 aa33.68■■■□□ 2.98
RFX1-205ENST00000589239 RALBP1Q15311 655 aa33.67■■■□□ 2.98
RFX1-205ENST00000589239 FYB1O15117 783 aa33.66■■■□□ 2.98
RFX1-205ENST00000589239 FOXO3O43524 673 aa33.66■■■□□ 2.98
RFX1-205ENST00000589239 GGNBP2Q9H3C7 697 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms