RNA–Protein interactions for RNA: ENST00000589140.1

SEPT9-223, Transcript of septin 9, human

TSL 4

Gene SEPT9, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-223	ENST00000589140	MEX3C	Q5U5Q3	659 aa	Known RBP	28.94	■■■□□ 2.22
SEPT9-223	ENST00000589140	ORAI2	Q96SN7	254 aa		28.94	■■■□□ 2.22
SEPT9-223	ENST00000589140	C14orf93	Q9H972	538 aa	Known RBP	28.94	■■■□□ 2.22
SEPT9-223	ENST00000589140	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.94	■■■□□ 2.22
SEPT9-223	ENST00000589140	WAPL	Q7Z5K2	1190 aa		28.93	■■■□□ 2.22
SEPT9-223	ENST00000589140	PNPLA6	Q8IY17	1366 aa		28.89	■■■□□ 2.22
SEPT9-223	ENST00000589140	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.89	■■■□□ 2.22
SEPT9-223	ENST00000589140	NUTM2E	B1AL46	878 aa	Predicted RBP	28.89	■■■□□ 2.22
SEPT9-223	ENST00000589140	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.89	■■■□□ 2.22
SEPT9-223	ENST00000589140	PLEKHH1	Q9ULM0	1364 aa		28.88	■■■□□ 2.21
SEPT9-223	ENST00000589140	CFAP70	Q5T0N1	1121 aa		28.88	■■■□□ 2.21
SEPT9-223	ENST00000589140	SOS2	Q07890	1332 aa	Predicted RBP	28.88	■■■□□ 2.21
SEPT9-223	ENST00000589140	SIRT1	Q96EB6	747 aa		28.87	■■■□□ 2.21
SEPT9-223	ENST00000589140	ZNF772	Q68DY9	489 aa	Predicted RBP	28.86	■■■□□ 2.21
SEPT9-223	ENST00000589140	DHX57	Q6P158	1386 aa	Known RBP	28.86	■■■□□ 2.21
SEPT9-223	ENST00000589140	ESCO1	Q5FWF5	840 aa		28.83	■■■□□ 2.21
SEPT9-223	ENST00000589140	FMN2	Q9NZ56	1722 aa		28.83	■■■□□ 2.21
SEPT9-223	ENST00000589140	NPHP3	Q7Z494	1330 aa		28.79	■■■□□ 2.2
SEPT9-223	ENST00000589140	NUTM2F	A1L443	756 aa		28.78	■■■□□ 2.2
SEPT9-223	ENST00000589140	ADGRB1	O14514	1584 aa		28.77	■■■□□ 2.2
SEPT9-223	ENST00000589140	DLC1	Q96QB1	1528 aa		28.77	■■■□□ 2.2
SEPT9-223	ENST00000589140	AFF2	P51816	1311 aa		28.76	■■■□□ 2.19
SEPT9-223	ENST00000589140	DCAF11	Q8TEB1	546 aa		28.76	■■■□□ 2.19
SEPT9-223	ENST00000589140	STAC3	Q96MF2	364 aa		28.76	■■■□□ 2.19
SEPT9-223	ENST00000589140	PXDN	Q92626	1479 aa		28.76	■■■□□ 2.19
SEPT9-223	ENST00000589140	KDM2A	Q9Y2K7	1162 aa		28.75	■■■□□ 2.19
SEPT9-223	ENST00000589140	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.75	■■■□□ 2.19
SEPT9-223	ENST00000589140	FOXO3	O43524	673 aa		28.74	■■■□□ 2.19
SEPT9-223	ENST00000589140	PRAM1	Q96QH2	718 aa		28.74	■■■□□ 2.19
SEPT9-223	ENST00000589140	KIF1A	Q12756	1690 aa		28.74	■■■□□ 2.19
SEPT9-223	ENST00000589140	RGPD8	O14715	1765 aa	Predicted RBP	28.73	■■■□□ 2.19
SEPT9-223	ENST00000589140	C8orf37	Q96NL8	207 aa		28.72	■■■□□ 2.19
SEPT9-223	ENST00000589140	ADAMTS2	O95450	1211 aa		28.7	■■■□□ 2.18
SEPT9-223	ENST00000589140	RXRB	P28702	533 aa		28.69	■■■□□ 2.18
SEPT9-223	ENST00000589140	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
SEPT9-223	ENST00000589140	XPC	Q01831	940 aa	Predicted RBP	28.68	■■■□□ 2.18
SEPT9-223	ENST00000589140	POGK	Q9P215	609 aa		28.68	■■■□□ 2.18
SEPT9-223	ENST00000589140	ADGRB2	O60241	1585 aa		28.67	■■■□□ 2.18
SEPT9-223	ENST00000589140	NGLY1	Q96IV0	654 aa		28.66	■■■□□ 2.18
SEPT9-223	ENST00000589140	TRAK1	Q9UPV9	953 aa		28.66	■■■□□ 2.18
SEPT9-223	ENST00000589140	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.65	■■■□□ 2.18
SEPT9-223	ENST00000589140	PHF8	Q9UPP1	1060 aa		28.62	■■■□□ 2.17
SEPT9-223	ENST00000589140	MARF1	Q9Y4F3	1742 aa	Known RBP	28.61	■■■□□ 2.17
SEPT9-223	ENST00000589140	QTRT2	Q9H974	415 aa	Known RBP	28.61	■■■□□ 2.17
SEPT9-223	ENST00000589140	USP32	Q8NFA0	1604 aa		28.61	■■■□□ 2.17
SEPT9-223	ENST00000589140	ANKAR	Q7Z5J8	1434 aa		28.6	■■■□□ 2.17
SEPT9-223	ENST00000589140	KRT28	Q7Z3Y7	464 aa		28.6	■■■□□ 2.17
SEPT9-223	ENST00000589140	SPATA31A3	Q5VYP0	1347 aa		28.6	■■■□□ 2.17
SEPT9-223	ENST00000589140	RBM6	P78332	1123 aa	Known RBP	28.58	■■■□□ 2.17
SEPT9-223	ENST00000589140	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.58	■■■□□ 2.17
SEPT9-223	ENST00000589140	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.57	■■■□□ 2.16
SEPT9-223	ENST00000589140	USP21	Q9UK80	565 aa		28.56	■■■□□ 2.16
SEPT9-223	ENST00000589140	KIAA1210	Q9ULL0	1709 aa		28.56	■■■□□ 2.16
SEPT9-223	ENST00000589140	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.55	■■■□□ 2.16
SEPT9-223	ENST00000589140	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.55	■■■□□ 2.16
SEPT9-223	ENST00000589140	EIF3A	Q14152	1382 aa	Known RBP	28.54	■■■□□ 2.16
SEPT9-223	ENST00000589140	PSME1	Q06323	249 aa		28.54	■■■□□ 2.16
SEPT9-223	ENST00000589140	TNS3	Q68CZ2	1445 aa		28.52	■■■□□ 2.16
SEPT9-223	ENST00000589140	TULP4	Q9NRJ4	1543 aa		28.52	■■■□□ 2.16
SEPT9-223	ENST00000589140	RGS12	O14924	1447 aa		28.52	■■■□□ 2.16
SEPT9-223	ENST00000589140	SBNO1	A3KN83	1393 aa		28.51	■■■□□ 2.16
SEPT9-223	ENST00000589140	WASL	O00401	505 aa	Predicted RBP	28.51	■■■□□ 2.15
SEPT9-223	ENST00000589140	TRPC5	Q9UL62	973 aa	Predicted RBP	28.51	■■■□□ 2.15
SEPT9-223	ENST00000589140	PMFBP1	Q8TBY8	1022 aa		28.5	■■■□□ 2.15
SEPT9-223	ENST00000589140	PRR36	Q9H6K5	1346 aa		28.49	■■■□□ 2.15
SEPT9-223	ENST00000589140	ATRN	O75882	1429 aa		28.48	■■■□□ 2.15
SEPT9-223	ENST00000589140	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.47	■■■□□ 2.15
SEPT9-223	ENST00000589140	BCL9L	Q86UU0	1499 aa		28.46	■■■□□ 2.15
SEPT9-223	ENST00000589140	ARHGEF10	O15013	1369 aa		28.45	■■■□□ 2.14
SEPT9-223	ENST00000589140	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.44	■■■□□ 2.14
SEPT9-223	ENST00000589140	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.44	■■■□□ 2.14
SEPT9-223	ENST00000589140	ABCA3	Q99758	1704 aa		28.43	■■■□□ 2.14
SEPT9-223	ENST00000589140	ITSN1	Q15811	1721 aa		28.43	■■■□□ 2.14
SEPT9-223	ENST00000589140	NBPF1	Q3BBV0	1214 aa		28.41	■■■□□ 2.14
SEPT9-223	ENST00000589140	LMOD2	Q6P5Q4	547 aa		28.41	■■■□□ 2.14
SEPT9-223	ENST00000589140	SLIT2	O94813	1529 aa		28.41	■■■□□ 2.14
SEPT9-223	ENST00000589140	GPRASP1	Q5JY77	1395 aa		28.4	■■■□□ 2.14
SEPT9-223	ENST00000589140	HAP1	P54257	671 aa	Predicted RBP	28.4	■■■□□ 2.14
SEPT9-223	ENST00000589140	CABLES1	Q8TDN4	633 aa		28.4	■■■□□ 2.14
SEPT9-223	ENST00000589140	ATP7B	P35670	1465 aa		28.4	■■■□□ 2.14
SEPT9-223	ENST00000589140	ALS2	Q96Q42	1657 aa		28.39	■■■□□ 2.14
SEPT9-223	ENST00000589140	L3MBTL2	Q969R5	705 aa		28.37	■■■□□ 2.13
SEPT9-223	ENST00000589140	NUDT16	Q96DE0	195 aa	Known RBP	28.37	■■■□□ 2.13
SEPT9-223	ENST00000589140	UNC5CL	Q8IV45	518 aa		28.36	■■■□□ 2.13
SEPT9-223	ENST00000589140	NGDN	Q8NEJ9	315 aa	Known RBP	28.36	■■■□□ 2.13
SEPT9-223	ENST00000589140	PLEKHG5	O94827	1062 aa		28.35	■■■□□ 2.13
SEPT9-223	ENST00000589140	GJD4	Q96KN9	370 aa	Predicted RBP	28.35	■■■□□ 2.13
SEPT9-223	ENST00000589140	SIN3A	Q96ST3	1273 aa		28.35	■■■□□ 2.13
SEPT9-223	ENST00000589140	CDK19	Q9BWU1	502 aa		28.35	■■■□□ 2.13
SEPT9-223	ENST00000589140	NWD2	Q9ULI1	1742 aa		28.34	■■■□□ 2.13
SEPT9-223	ENST00000589140	PLCH1	Q4KWH8	1693 aa		28.33	■■■□□ 2.13
SEPT9-223	ENST00000589140	TOPAZ1	Q8N9V7	1692 aa		28.32	■■■□□ 2.12
SEPT9-223	ENST00000589140	GLI3	P10071	1580 aa		28.3	■■■□□ 2.12
SEPT9-223	ENST00000589140	ATAD2	Q6PL18	1390 aa		28.3	■■■□□ 2.12
SEPT9-223	ENST00000589140	CCDC61	Q9Y6R9	512 aa		28.29	■■■□□ 2.12
SEPT9-223	ENST00000589140	RALGAPB	Q86X10	1494 aa		28.28	■■■□□ 2.12
SEPT9-223	ENST00000589140	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.28	■■■□□ 2.12
SEPT9-223	ENST00000589140	NEUROD1	Q13562	356 aa		28.28	■■■□□ 2.12
SEPT9-223	ENST00000589140	CRYBG1	Q9Y4K1	1723 aa		28.28	■■■□□ 2.12
SEPT9-223	ENST00000589140	TRPM1	Q7Z4N2	1603 aa		28.28	■■■□□ 2.12

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms