RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 MARF1Q9Y4F3 1742 aaKnown RBP22.96■■□□□ 1.27
SF3A2-204ENST00000589118 FOXO3O43524 673 aa22.95■■□□□ 1.26
SF3A2-204ENST00000589118 BCL9LQ86UU0 1499 aa22.95■■□□□ 1.26
SF3A2-204ENST00000589118 PPLO60437 1756 aa22.94■■□□□ 1.26
SF3A2-204ENST00000589118 ZRANB1Q9UGI0 708 aa22.94■■□□□ 1.26
SF3A2-204ENST00000589118 MYOM2P54296 1465 aa22.92■■□□□ 1.26
SF3A2-204ENST00000589118 PXDNQ92626 1479 aa22.92■■□□□ 1.26
SF3A2-204ENST00000589118 NAIPQ13075 1403 aa22.92■■□□□ 1.26
SF3A2-204ENST00000589118 FOXD1Q16676 465 aa22.91■■□□□ 1.26
SF3A2-204ENST00000589118 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
SF3A2-204ENST00000589118 STK26Q9P289 416 aa22.91■■□□□ 1.26
SF3A2-204ENST00000589118 PLEKHG5O94827 1062 aa22.89■■□□□ 1.25
SF3A2-204ENST00000589118 GJD4Q96KN9 370 aaPredicted RBP22.89■■□□□ 1.25
SF3A2-204ENST00000589118 HFM1A2PYH4 1435 aa22.89■■□□□ 1.25
SF3A2-204ENST00000589118 NPHP3Q7Z494 1330 aa22.87■■□□□ 1.25
SF3A2-204ENST00000589118 ADGRF5Q8IZF2 1346 aa22.87■■□□□ 1.25
SF3A2-204ENST00000589118 EP400Q96L91 3159 aa22.87■■□□□ 1.25
SF3A2-204ENST00000589118 BRWD3Q6RI45 1802 aa22.87■■□□□ 1.25
SF3A2-204ENST00000589118 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
SF3A2-204ENST00000589118 RPGRIP1LQ68CZ1 1315 aa22.85■■□□□ 1.25
SF3A2-204ENST00000589118 GLI3P10071 1580 aa22.85■■□□□ 1.25
SF3A2-204ENST00000589118 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
SF3A2-204ENST00000589118 PRAG1Q86YV5 1406 aa22.85■■□□□ 1.25
SF3A2-204ENST00000589118 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
SF3A2-204ENST00000589118 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
SF3A2-204ENST00000589118 RGL3Q3MIN7 710 aa22.84■■□□□ 1.25
SF3A2-204ENST00000589118 DEFB132Q7Z7B7 95 aa22.83■■□□□ 1.25
SF3A2-204ENST00000589118 RGPD8O14715 1765 aaPredicted RBP22.82■■□□□ 1.24
SF3A2-204ENST00000589118 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
SF3A2-204ENST00000589118 CCDC125Q86Z20 511 aa22.8■■□□□ 1.24
SF3A2-204ENST00000589118 UNC5CLQ8IV45 518 aa22.8■■□□□ 1.24
SF3A2-204ENST00000589118 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
SF3A2-204ENST00000589118 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.79■■□□□ 1.24
SF3A2-204ENST00000589118 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
SF3A2-204ENST00000589118 SPATA31A3Q5VYP0 1347 aa22.78■■□□□ 1.24
SF3A2-204ENST00000589118 SLIT2O94813 1529 aa22.77■■□□□ 1.24
SF3A2-204ENST00000589118 FMN2Q9NZ56 1722 aa22.77■■□□□ 1.24
SF3A2-204ENST00000589118 KRT28Q7Z3Y7 464 aa22.77■■□□□ 1.24
SF3A2-204ENST00000589118 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
SF3A2-204ENST00000589118 SEPT12Q8IYM1 358 aa22.74■■□□□ 1.23
SF3A2-204ENST00000589118 USP32Q8NFA0 1604 aa22.74■■□□□ 1.23
SF3A2-204ENST00000589118 LRPPRCP42704 1394 aaKnown RBP22.74■■□□□ 1.23
SF3A2-204ENST00000589118 BLMP54132 1417 aaPredicted RBP22.74■■□□□ 1.23
SF3A2-204ENST00000589118 CCDC9Q9Y3X0 531 aaKnown RBP22.71■■□□□ 1.23
SF3A2-204ENST00000589118 TECPR2O15040 1411 aa22.71■■□□□ 1.23
SF3A2-204ENST00000589118 PLCH1Q4KWH8 1693 aa22.71■■□□□ 1.23
SF3A2-204ENST00000589118 KNDC1Q76NI1 1749 aa22.71■■□□□ 1.23
SF3A2-204ENST00000589118 HAP1P54257 671 aaPredicted RBP22.7■■□□□ 1.22
SF3A2-204ENST00000589118 LMOD2Q6P5Q4 547 aa22.7■■□□□ 1.22
SF3A2-204ENST00000589118 ABCC11Q96J66 1382 aa22.7■■□□□ 1.22
SF3A2-204ENST00000589118 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
SF3A2-204ENST00000589118 SPATA31E1Q6ZUB1 1445 aa22.69■■□□□ 1.22
SF3A2-204ENST00000589118 PSDA5PKW4 1024 aaPredicted RBP22.68■■□□□ 1.22
SF3A2-204ENST00000589118 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
SF3A2-204ENST00000589118 YTHDC2Q9H6S0 1430 aaKnown RBP22.67■■□□□ 1.22
SF3A2-204ENST00000589118 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
SF3A2-204ENST00000589118 ABCA3Q99758 1704 aa22.67■■□□□ 1.22
SF3A2-204ENST00000589118 CCDC144AA2RUR9 1427 aa22.66■■□□□ 1.22
SF3A2-204ENST00000589118 VPS72Q15906 364 aa22.66■■□□□ 1.22
SF3A2-204ENST00000589118 SF3B2Q13435 895 aaKnown RBP22.65■■□□□ 1.22
SF3A2-204ENST00000589118 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
SF3A2-204ENST00000589118 FAM83GA6ND36 823 aa22.64■■□□□ 1.21
SF3A2-204ENST00000589118 KRT27Q7Z3Y8 459 aa22.64■■□□□ 1.21
SF3A2-204ENST00000589118 PMFBP1Q8TBY8 1022 aa22.64■■□□□ 1.21
SF3A2-204ENST00000589118 PIK3C2GO75747 1445 aa22.64■■□□□ 1.21
SF3A2-204ENST00000589118 FAM182BQ5T319 152 aa22.63■■□□□ 1.21
SF3A2-204ENST00000589118 ANKRD30BQ9BXX2 1392 aa22.63■■□□□ 1.21
SF3A2-204ENST00000589118 A0A0G2JS52 829 aa22.62■■□□□ 1.21
SF3A2-204ENST00000589118 MYT1Q01538 1121 aa22.62■■□□□ 1.21
SF3A2-204ENST00000589118 CFAP70Q5T0N1 1121 aa22.62■■□□□ 1.21
SF3A2-204ENST00000589118 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
SF3A2-204ENST00000589118 NWD2Q9ULI1 1742 aa22.62■■□□□ 1.21
SF3A2-204ENST00000589118 ONECUT3O60422 494 aaPredicted RBP22.61■■□□□ 1.21
SF3A2-204ENST00000589118 PSME1Q06323 249 aa22.61■■□□□ 1.21
SF3A2-204ENST00000589118 FAM98CQ17RN3 349 aaKnown RBP22.59■■□□□ 1.21
SF3A2-204ENST00000589118 PRAM1Q96QH2 718 aa22.58■■□□□ 1.21
SF3A2-204ENST00000589118 C14orf93Q9H972 538 aaKnown RBP22.58■■□□□ 1.21
SF3A2-204ENST00000589118 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
SF3A2-204ENST00000589118 NRAPQ86VF7 1730 aa22.57■■□□□ 1.2
SF3A2-204ENST00000589118 LRP5O75197 1615 aa22.56■■□□□ 1.2
SF3A2-204ENST00000589118 SBNO1A3KN83 1393 aa22.55■■□□□ 1.2
SF3A2-204ENST00000589118 EN1Q05925 392 aaPredicted RBP22.55■■□□□ 1.2
SF3A2-204ENST00000589118 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
SF3A2-204ENST00000589118 BTG4Q9NY30 223 aa22.55■■□□□ 1.2
SF3A2-204ENST00000589118 HRCP23327 699 aa22.54■■□□□ 1.2
SF3A2-204ENST00000589118 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
SF3A2-204ENST00000589118 DHX57Q6P158 1386 aaKnown RBP22.52■■□□□ 1.2
SF3A2-204ENST00000589118 TRPM3Q9HCF6 1732 aaPredicted RBP22.52■■□□□ 1.2
SF3A2-204ENST00000589118 BAG6P46379 1132 aa22.52■■□□□ 1.2
SF3A2-204ENST00000589118 POGKQ9P215 609 aa22.51■■□□□ 1.19
SF3A2-204ENST00000589118 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
SF3A2-204ENST00000589118 R3HDM1Q15032 1099 aaKnown RBP22.49■■□□□ 1.19
SF3A2-204ENST00000589118 MINK1Q8N4C8 1332 aaPredicted RBP22.48■■□□□ 1.19
SF3A2-204ENST00000589118 PRR36Q9H6K5 1346 aa22.48■■□□□ 1.19
SF3A2-204ENST00000589118 ALS2Q96Q42 1657 aa22.48■■□□□ 1.19
SF3A2-204ENST00000589118 TRAK1Q9UPV9 953 aa22.47■■□□□ 1.19
SF3A2-204ENST00000589118 COL14A1Q05707 1796 aaKnown RBP22.47■■□□□ 1.19
SF3A2-204ENST00000589118 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
SF3A2-204ENST00000589118 EZH2Q15910 746 aaKnown RBP22.45■■□□□ 1.18
SF3A2-204ENST00000589118 SPATA31A5Q5VU36 1347 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms