RNA–Protein interactions for RNA: ENST00000589053.1

INO80C-208, Transcript of INO80 complex subunit C, human

Gene INO80C, Length 434 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80C-208	ENST00000589053	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.46	■■■□□ 2.79
INO80C-208	ENST00000589053	SHPRH	Q149N8	1683 aa		32.45	■■■□□ 2.79
INO80C-208	ENST00000589053	LRRC59	Q96AG4	307 aa	Known RBP	32.44	■■■□□ 2.78
INO80C-208	ENST00000589053	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.4	■■■□□ 2.78
INO80C-208	ENST00000589053	NUTM2E	B1AL46	878 aa	Predicted RBP	32.4	■■■□□ 2.78
INO80C-208	ENST00000589053	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.4	■■■□□ 2.78
INO80C-208	ENST00000589053	KDM2A	Q9Y2K7	1162 aa		32.39	■■■□□ 2.78
INO80C-208	ENST00000589053	CDC42BPG	Q6DT37	1551 aa		32.39	■■■□□ 2.78
INO80C-208	ENST00000589053	KNDC1	Q76NI1	1749 aa		32.39	■■■□□ 2.78
INO80C-208	ENST00000589053	MEX3C	Q5U5Q3	659 aa	Known RBP	32.38	■■■□□ 2.77
INO80C-208	ENST00000589053	DCAF11	Q8TEB1	546 aa		32.38	■■■□□ 2.77
INO80C-208	ENST00000589053	SIRT1	Q96EB6	747 aa		32.38	■■■□□ 2.77
INO80C-208	ENST00000589053	DHX57	Q6P158	1386 aa	Known RBP	32.37	■■■□□ 2.77
INO80C-208	ENST00000589053	SOS2	Q07890	1332 aa	Predicted RBP	32.36	■■■□□ 2.77
INO80C-208	ENST00000589053	NUTM2F	A1L443	756 aa		32.36	■■■□□ 2.77
INO80C-208	ENST00000589053	ESCO1	Q5FWF5	840 aa		32.36	■■■□□ 2.77
INO80C-208	ENST00000589053	PNPLA6	Q8IY17	1366 aa		32.35	■■■□□ 2.77
INO80C-208	ENST00000589053	LAMC1	P11047	1609 aa		32.34	■■■□□ 2.77
INO80C-208	ENST00000589053	PRAM1	Q96QH2	718 aa		32.3	■■■□□ 2.76
INO80C-208	ENST00000589053	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
INO80C-208	ENST00000589053	ADGRB1	O14514	1584 aa		32.28	■■■□□ 2.76
INO80C-208	ENST00000589053	FOXO3	O43524	673 aa		32.27	■■■□□ 2.76
INO80C-208	ENST00000589053	ZNF772	Q68DY9	489 aa	Predicted RBP	32.25	■■■□□ 2.75
INO80C-208	ENST00000589053	STAC3	Q96MF2	364 aa		32.25	■■■□□ 2.75
INO80C-208	ENST00000589053	NPHP3	Q7Z494	1330 aa		32.25	■■■□□ 2.75
INO80C-208	ENST00000589053	XPC	Q01831	940 aa	Predicted RBP	32.24	■■■□□ 2.75
INO80C-208	ENST00000589053	TRAK1	Q9UPV9	953 aa		32.24	■■■□□ 2.75
INO80C-208	ENST00000589053	FMN2	Q9NZ56	1722 aa		32.22	■■■□□ 2.75
INO80C-208	ENST00000589053	DLC1	Q96QB1	1528 aa		32.21	■■■□□ 2.75
INO80C-208	ENST00000589053	POGK	Q9P215	609 aa		32.21	■■■□□ 2.75
INO80C-208	ENST00000589053	PXDN	Q92626	1479 aa		32.21	■■■□□ 2.75
INO80C-208	ENST00000589053	AFF2	P51816	1311 aa		32.21	■■■□□ 2.75
INO80C-208	ENST00000589053	C8orf37	Q96NL8	207 aa		32.19	■■■□□ 2.74
INO80C-208	ENST00000589053	ADAMTS2	O95450	1211 aa		32.18	■■■□□ 2.74
INO80C-208	ENST00000589053	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.13	■■■□□ 2.73
INO80C-208	ENST00000589053	PHF8	Q9UPP1	1060 aa		32.12	■■■□□ 2.73
INO80C-208	ENST00000589053	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.1	■■■□□ 2.73
INO80C-208	ENST00000589053	NGLY1	Q96IV0	654 aa		32.1	■■■□□ 2.73
INO80C-208	ENST00000589053	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.09	■■■□□ 2.73
INO80C-208	ENST00000589053	RXRB	P28702	533 aa		32.09	■■■□□ 2.73
INO80C-208	ENST00000589053	KRT28	Q7Z3Y7	464 aa		32.09	■■■□□ 2.73
INO80C-208	ENST00000589053	RGPD8	O14715	1765 aa	Predicted RBP	32.09	■■■□□ 2.73
INO80C-208	ENST00000589053	SPATA31A3	Q5VYP0	1347 aa		32.06	■■■□□ 2.72
INO80C-208	ENST00000589053	KIF1A	Q12756	1690 aa		32.06	■■■□□ 2.72
INO80C-208	ENST00000589053	QTRT2	Q9H974	415 aa	Known RBP	32.06	■■■□□ 2.72
INO80C-208	ENST00000589053	ADGRB2	O60241	1585 aa		32.06	■■■□□ 2.72
INO80C-208	ENST00000589053	PMFBP1	Q8TBY8	1022 aa		32.04	■■■□□ 2.72
INO80C-208	ENST00000589053	USP32	Q8NFA0	1604 aa		32.04	■■■□□ 2.72
INO80C-208	ENST00000589053	NBPF1	Q3BBV0	1214 aa		32.03	■■■□□ 2.72
INO80C-208	ENST00000589053	PRR36	Q9H6K5	1346 aa		32.02	■■■□□ 2.72
INO80C-208	ENST00000589053	ANKAR	Q7Z5J8	1434 aa		32.02	■■■□□ 2.72
INO80C-208	ENST00000589053	WASL	O00401	505 aa	Predicted RBP	32.02	■■■□□ 2.72
INO80C-208	ENST00000589053	SIN3A	Q96ST3	1273 aa		32.02	■■■□□ 2.72
INO80C-208	ENST00000589053	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32	■■■□□ 2.71
INO80C-208	ENST00000589053	USP21	Q9UK80	565 aa		31.99	■■■□□ 2.71
INO80C-208	ENST00000589053	PSME1	Q06323	249 aa		31.98	■■■□□ 2.71
INO80C-208	ENST00000589053	L3MBTL2	Q969R5	705 aa		31.97	■■■□□ 2.71
INO80C-208	ENST00000589053	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.97	■■■□□ 2.71
INO80C-208	ENST00000589053	RBM6	P78332	1123 aa	Known RBP	31.96	■■■□□ 2.71
INO80C-208	ENST00000589053	TNS3	Q68CZ2	1445 aa		31.94	■■■□□ 2.7
INO80C-208	ENST00000589053	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.94	■■■□□ 2.7
INO80C-208	ENST00000589053	KIAA1210	Q9ULL0	1709 aa		31.94	■■■□□ 2.7
INO80C-208	ENST00000589053	TULP4	Q9NRJ4	1543 aa		31.94	■■■□□ 2.7
INO80C-208	ENST00000589053	SBNO1	A3KN83	1393 aa		31.94	■■■□□ 2.7
INO80C-208	ENST00000589053	NEUROD1	Q13562	356 aa		31.92	■■■□□ 2.7
INO80C-208	ENST00000589053	CABLES1	Q8TDN4	633 aa		31.92	■■■□□ 2.7
INO80C-208	ENST00000589053	EIF3A	Q14152	1382 aa	Known RBP	31.92	■■■□□ 2.7
INO80C-208	ENST00000589053	BCL9L	Q86UU0	1499 aa		31.9	■■■□□ 2.7
INO80C-208	ENST00000589053	PLEKHG5	O94827	1062 aa		31.89	■■■□□ 2.7
INO80C-208	ENST00000589053	LMOD2	Q6P5Q4	547 aa		31.89	■■■□□ 2.7
INO80C-208	ENST00000589053	TRPC5	Q9UL62	973 aa	Predicted RBP	31.89	■■■□□ 2.7
INO80C-208	ENST00000589053	RGS12	O14924	1447 aa		31.89	■■■□□ 2.7
INO80C-208	ENST00000589053	CDK19	Q9BWU1	502 aa		31.88	■■■□□ 2.69
INO80C-208	ENST00000589053	ATRN	O75882	1429 aa		31.87	■■■□□ 2.69
INO80C-208	ENST00000589053	NUDT16	Q96DE0	195 aa	Known RBP	31.87	■■■□□ 2.69
INO80C-208	ENST00000589053	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.85	■■■□□ 2.69
INO80C-208	ENST00000589053	MARF1	Q9Y4F3	1742 aa	Known RBP	31.85	■■■□□ 2.69
INO80C-208	ENST00000589053	ATP7B	P35670	1465 aa		31.84	■■■□□ 2.69
INO80C-208	ENST00000589053	ARHGEF10	O15013	1369 aa		31.83	■■■□□ 2.69
INO80C-208	ENST00000589053	NGDN	Q8NEJ9	315 aa	Known RBP	31.83	■■■□□ 2.69
INO80C-208	ENST00000589053	GPRASP1	Q5JY77	1395 aa		31.82	■■■□□ 2.69
INO80C-208	ENST00000589053	HAP1	P54257	671 aa	Predicted RBP	31.81	■■■□□ 2.68
INO80C-208	ENST00000589053	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.8	■■■□□ 2.68
INO80C-208	ENST00000589053	SLIT2	O94813	1529 aa		31.8	■■■□□ 2.68
INO80C-208	ENST00000589053	UNC5CL	Q8IV45	518 aa		31.78	■■■□□ 2.68
INO80C-208	ENST00000589053	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.77	■■■□□ 2.68
INO80C-208	ENST00000589053	GJD4	Q96KN9	370 aa	Predicted RBP	31.76	■■■□□ 2.67
INO80C-208	ENST00000589053	TRIM26	Q12899	539 aa	Predicted RBP	31.75	■■■□□ 2.67
INO80C-208	ENST00000589053	CCDC61	Q9Y6R9	512 aa		31.75	■■■□□ 2.67
INO80C-208	ENST00000589053	PAK3	O75914	559 aa	Predicted RBP	31.74	■■■□□ 2.67
INO80C-208	ENST00000589053	ALS2	Q96Q42	1657 aa		31.73	■■■□□ 2.67
INO80C-208	ENST00000589053	FAM83G	A6ND36	823 aa		31.73	■■■□□ 2.67
INO80C-208	ENST00000589053	ABCA3	Q99758	1704 aa		31.72	■■■□□ 2.67
INO80C-208	ENST00000589053	PLEKHG3	A1L390	1219 aa		31.71	■■■□□ 2.67
INO80C-208	ENST00000589053	NBPF8	Q3BBV2	869 aa		31.71	■■■□□ 2.67
INO80C-208	ENST00000589053	ACE	P12821	1306 aa		31.71	■■■□□ 2.67
INO80C-208	ENST00000589053	TRPM1	Q7Z4N2	1603 aa		31.71	■■■□□ 2.67
INO80C-208	ENST00000589053	ITSN1	Q15811	1721 aa		31.7	■■■□□ 2.67
INO80C-208	ENST00000589053	CABP2	Q9NPB3	220 aa		31.7	■■■□□ 2.67
INO80C-208	ENST00000589053	POLR3A	O14802	1390 aa	Predicted RBP	31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms