RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 NALCNQ8IZF0 1738 aa28.27■■■□□ 2.12
DNMT1-216ENST00000588952 EIF4G2P78344 907 aaKnown RBP eCLIP28.26■■■□□ 2.11
DNMT1-216ENST00000588952 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
DNMT1-216ENST00000588952 MINK1Q8N4C8 1332 aaPredicted RBP28.22■■■□□ 2.11
DNMT1-216ENST00000588952 TESK2Q96S53 571 aa28.22■■■□□ 2.11
DNMT1-216ENST00000588952 ADGRL3Q9HAR2 1447 aa28.22■■■□□ 2.11
DNMT1-216ENST00000588952 ADGRB2O60241 1585 aa28.2■■■□□ 2.11
DNMT1-216ENST00000588952 NCOA3Q9Y6Q9 1424 aa28.2■■■□□ 2.11
DNMT1-216ENST00000588952 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
DNMT1-216ENST00000588952 SBNO2Q9Y2G9 1366 aa28.18■■■□□ 2.1
DNMT1-216ENST00000588952 C14orf37Q86TY3 774 aa28.15■■■□□ 2.1
DNMT1-216ENST00000588952 CDC42BPGQ6DT37 1551 aa28.15■■■□□ 2.1
DNMT1-216ENST00000588952 DISP3Q9P2K9 1392 aa28.11■■■□□ 2.09
DNMT1-216ENST00000588952 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
DNMT1-216ENST00000588952 MSH6P52701 1360 aa28.11■■■□□ 2.09
DNMT1-216ENST00000588952 FMN2Q9NZ56 1722 aa28.09■■■□□ 2.09
DNMT1-216ENST00000588952 WASLO00401 505 aaPredicted RBP28.09■■■□□ 2.09
DNMT1-216ENST00000588952 DCCP43146 1447 aa28.09■■■□□ 2.09
DNMT1-216ENST00000588952 C11orf95C9JLR9 678 aaPredicted RBP28.07■■■□□ 2.08
DNMT1-216ENST00000588952 CDK19Q9BWU1 502 aa28.07■■■□□ 2.08
DNMT1-216ENST00000588952 CERKQ8TCT0 537 aa28.06■■■□□ 2.08
DNMT1-216ENST00000588952 EVC2Q86UK5 1308 aa28.05■■■□□ 2.08
DNMT1-216ENST00000588952 USP32Q8NFA0 1604 aa28.05■■■□□ 2.08
DNMT1-216ENST00000588952 IQSEC2Q5JU85 1478 aa28.04■■■□□ 2.08
DNMT1-216ENST00000588952 CABP2Q9NPB3 220 aa28.04■■■□□ 2.08
DNMT1-216ENST00000588952 PRR36Q9H6K5 1346 aa28.03■■■□□ 2.08
DNMT1-216ENST00000588952 NUTM2FA1L443 756 aa28.03■■■□□ 2.08
DNMT1-216ENST00000588952 TMF1P82094 1093 aa28.03■■■□□ 2.08
DNMT1-216ENST00000588952 MST1RQ04912 1400 aa28.02■■■□□ 2.08
DNMT1-216ENST00000588952 ATF3P18847 181 aa28.02■■■□□ 2.08
DNMT1-216ENST00000588952 ATP7BP35670 1465 aa28.02■■■□□ 2.08
DNMT1-216ENST00000588952 SRPK2P78362 688 aaKnown RBP28■■■□□ 2.07
DNMT1-216ENST00000588952 CADPS2Q86UW7 1296 aa27.99■■■□□ 2.07
DNMT1-216ENST00000588952 RGPD8O14715 1765 aaPredicted RBP27.98■■■□□ 2.07
DNMT1-216ENST00000588952 C1orf167Q5SNV9 1468 aa27.97■■■□□ 2.07
DNMT1-216ENST00000588952 SLC24A1O60721 1099 aa27.97■■■□□ 2.07
DNMT1-216ENST00000588952 ANKARQ7Z5J8 1434 aa27.97■■■□□ 2.07
DNMT1-216ENST00000588952 TOPAZ1Q8N9V7 1692 aa27.97■■■□□ 2.07
DNMT1-216ENST00000588952 NUDT16Q96DE0 195 aaKnown RBP27.96■■■□□ 2.07
DNMT1-216ENST00000588952 KIF7Q2M1P5 1343 aa27.95■■■□□ 2.07
DNMT1-216ENST00000588952 WASHC2AQ641Q2 1341 aa27.93■■■□□ 2.06
DNMT1-216ENST00000588952 CCDC7Q96M83 1385 aa27.92■■■□□ 2.06
DNMT1-216ENST00000588952 PUS7Q96PZ0 661 aaKnown RBP27.92■■■□□ 2.06
DNMT1-216ENST00000588952 MYOM1P52179 1685 aa27.91■■■□□ 2.06
DNMT1-216ENST00000588952 ATAD2Q6PL18 1390 aa27.91■■■□□ 2.06
DNMT1-216ENST00000588952 SLAIN2Q9P270 581 aa27.91■■■□□ 2.06
DNMT1-216ENST00000588952 ORAI2Q96SN7 254 aa27.9■■■□□ 2.06
DNMT1-216ENST00000588952 POLR3GLQ9BT43 218 aa27.9■■■□□ 2.06
DNMT1-216ENST00000588952 ITSN1Q15811 1721 aa27.89■■■□□ 2.06
DNMT1-216ENST00000588952 CDCA8Q53HL2 280 aa27.89■■■□□ 2.06
DNMT1-216ENST00000588952 PPIP5K1Q6PFW1 1433 aa27.88■■■□□ 2.05
DNMT1-216ENST00000588952 UBAP1LF5GYI3 381 aa27.87■■■□□ 2.05
DNMT1-216ENST00000588952 CCDC61Q9Y6R9 512 aa27.87■■■□□ 2.05
DNMT1-216ENST00000588952 ZNF316A6NFI3 1004 aaPredicted RBP27.86■■■□□ 2.05
DNMT1-216ENST00000588952 ESCO1Q5FWF5 840 aa27.86■■■□□ 2.05
DNMT1-216ENST00000588952 CABP1Q9NZU7 370 aa27.85■■■□□ 2.05
DNMT1-216ENST00000588952 TOM1O60784 492 aa27.84■■■□□ 2.05
DNMT1-216ENST00000588952 BRINP3Q76B58 766 aa27.84■■■□□ 2.05
DNMT1-216ENST00000588952 SLC12A5Q9H2X9 1139 aa27.84■■■□□ 2.05
DNMT1-216ENST00000588952 PMFBP1Q8TBY8 1022 aa27.83■■■□□ 2.05
DNMT1-216ENST00000588952 PHF8Q9UPP1 1060 aa27.83■■■□□ 2.05
DNMT1-216ENST00000588952 ROBO1Q9Y6N7 1651 aa27.83■■■□□ 2.05
DNMT1-216ENST00000588952 CD163L1Q9NR16 1453 aa27.83■■■□□ 2.04
DNMT1-216ENST00000588952 PLEKHG3A1L390 1219 aa27.82■■■□□ 2.04
DNMT1-216ENST00000588952 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
DNMT1-216ENST00000588952 KIF1AQ12756 1690 aa27.81■■■□□ 2.04
DNMT1-216ENST00000588952 PIP4K2BP78356 416 aa27.79■■■□□ 2.04
DNMT1-216ENST00000588952 POLR3AO14802 1390 aaPredicted RBP27.78■■■□□ 2.04
DNMT1-216ENST00000588952 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
DNMT1-216ENST00000588952 ACEP12821 1306 aa27.77■■■□□ 2.04
DNMT1-216ENST00000588952 DDX17Q92841 729 aaKnown RBP27.77■■■□□ 2.04
DNMT1-216ENST00000588952 CPSF1Q10570 1443 aaKnown RBP27.76■■■□□ 2.04
DNMT1-216ENST00000588952 AKAP12Q02952 1782 aa27.76■■■□□ 2.03
DNMT1-216ENST00000588952 A0A1W2PP64 1363 aa27.75■■■□□ 2.03
DNMT1-216ENST00000588952 NHSL1Q5SYE7 1610 aa27.74■■■□□ 2.03
DNMT1-216ENST00000588952 FOXO3O43524 673 aa27.74■■■□□ 2.03
DNMT1-216ENST00000588952 SCAF1Q9H7N4 1312 aaKnown RBP27.73■■■□□ 2.03
DNMT1-216ENST00000588952 NGDNQ8NEJ9 315 aaKnown RBP27.73■■■□□ 2.03
DNMT1-216ENST00000588952 ANKRD36BQ8N2N9 1353 aa27.73■■■□□ 2.03
DNMT1-216ENST00000588952 MON2Q7Z3U7 1717 aa27.71■■■□□ 2.03
DNMT1-216ENST00000588952 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
DNMT1-216ENST00000588952 XPCQ01831 940 aaPredicted RBP27.7■■■□□ 2.02
DNMT1-216ENST00000588952 PXDNQ92626 1479 aa27.7■■■□□ 2.02
DNMT1-216ENST00000588952 PANK3Q9H999 370 aa27.69■■■□□ 2.02
DNMT1-216ENST00000588952 NRKQ7Z2Y5 1582 aa27.69■■■□□ 2.02
DNMT1-216ENST00000588952 USP6P35125 1406 aa27.68■■■□□ 2.02
DNMT1-216ENST00000588952 CARD14Q9BXL6 1004 aa27.68■■■□□ 2.02
DNMT1-216ENST00000588952 TERF2IPQ9NYB0 399 aa27.68■■■□□ 2.02
DNMT1-216ENST00000588952 HDGFL2Q7Z4V5 671 aaPredicted RBP27.67■■■□□ 2.02
DNMT1-216ENST00000588952 KTN1Q86UP2 1357 aaKnown RBP27.67■■■□□ 2.02
DNMT1-216ENST00000588952 TRPM3Q9HCF6 1732 aaPredicted RBP27.67■■■□□ 2.02
DNMT1-216ENST00000588952 SSH2Q76I76 1423 aa27.67■■■□□ 2.02
DNMT1-216ENST00000588952 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
DNMT1-216ENST00000588952 DDX10Q13206 875 aaKnown RBP27.65■■■□□ 2.02
DNMT1-216ENST00000588952 KRT28Q7Z3Y7 464 aa27.65■■■□□ 2.02
DNMT1-216ENST00000588952 PSME1Q06323 249 aa27.64■■■□□ 2.02
DNMT1-216ENST00000588952 ZNF692Q9BU19 519 aaPredicted RBP27.64■■■□□ 2.02
DNMT1-216ENST00000588952 SOS2Q07890 1332 aaPredicted RBP27.64■■■□□ 2.01
DNMT1-216ENST00000588952 NSD3Q9BZ95 1437 aa27.63■■■□□ 2.01
DNMT1-216ENST00000588952 PHLPP1O60346 1717 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms