RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LRPPRCP42704 1394 aaKnown RBP16.88■□□□□ 0.29
RFX1-204ENST00000588885 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
RFX1-204ENST00000588885 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
RFX1-204ENST00000588885 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
RFX1-204ENST00000588885 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
RFX1-204ENST00000588885 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
RFX1-204ENST00000588885 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
RFX1-204ENST00000588885 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
RFX1-204ENST00000588885 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
RFX1-204ENST00000588885 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
RFX1-204ENST00000588885 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
RFX1-204ENST00000588885 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
RFX1-204ENST00000588885 ASXL1Q8IXJ9 1541 aa16.84■□□□□ 0.29
RFX1-204ENST00000588885 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.28
RFX1-204ENST00000588885 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.28
RFX1-204ENST00000588885 NHSL1Q5SYE7 1610 aa16.82■□□□□ 0.28
RFX1-204ENST00000588885 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
RFX1-204ENST00000588885 POTEHQ6S545 545 aa16.82■□□□□ 0.28
RFX1-204ENST00000588885 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
RFX1-204ENST00000588885 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
RFX1-204ENST00000588885 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
RFX1-204ENST00000588885 PRAM1Q96QH2 718 aa16.81■□□□□ 0.28
RFX1-204ENST00000588885 NRXN1Q9ULB1 1477 aa16.8■□□□□ 0.28
RFX1-204ENST00000588885 POGKQ9P215 609 aa16.8■□□□□ 0.28
RFX1-204ENST00000588885 TRAK1Q9UPV9 953 aa16.8■□□□□ 0.28
RFX1-204ENST00000588885 MYOM2P54296 1465 aa16.8■□□□□ 0.28
RFX1-204ENST00000588885 TECPR2O15040 1411 aa16.79■□□□□ 0.28
RFX1-204ENST00000588885 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
RFX1-204ENST00000588885 XPCQ01831 940 aaPredicted RBP16.79■□□□□ 0.28
RFX1-204ENST00000588885 LRP6O75581 1613 aa16.78■□□□□ 0.28
RFX1-204ENST00000588885 SIRT1Q96EB6 747 aa16.78■□□□□ 0.28
RFX1-204ENST00000588885 FOXO3O43524 673 aa16.77■□□□□ 0.28
RFX1-204ENST00000588885 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
RFX1-204ENST00000588885 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
RFX1-204ENST00000588885 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
RFX1-204ENST00000588885 SOS2Q07890 1332 aaPredicted RBP16.74■□□□□ 0.27
RFX1-204ENST00000588885 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
RFX1-204ENST00000588885 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
RFX1-204ENST00000588885 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
RFX1-204ENST00000588885 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
RFX1-204ENST00000588885 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
RFX1-204ENST00000588885 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
RFX1-204ENST00000588885 MINK1Q8N4C8 1332 aaPredicted RBP16.72■□□□□ 0.27
RFX1-204ENST00000588885 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
RFX1-204ENST00000588885 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
RFX1-204ENST00000588885 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
RFX1-204ENST00000588885 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
RFX1-204ENST00000588885 NBPF1Q3BBV0 1214 aa16.69■□□□□ 0.26
RFX1-204ENST00000588885 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
RFX1-204ENST00000588885 AFF2P51816 1311 aa16.69■□□□□ 0.26
RFX1-204ENST00000588885 ADGRB1O14514 1584 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 RXRBP28702 533 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 L3MBTL2Q969R5 705 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 NGLY1Q96IV0 654 aa16.68■□□□□ 0.26
RFX1-204ENST00000588885 LAMC1P11047 1609 aa16.67■□□□□ 0.26
RFX1-204ENST00000588885 PSME1Q06323 249 aa16.65■□□□□ 0.26
RFX1-204ENST00000588885 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
RFX1-204ENST00000588885 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
RFX1-204ENST00000588885 WASLO00401 505 aaPredicted RBP16.64■□□□□ 0.25
RFX1-204ENST00000588885 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
RFX1-204ENST00000588885 PXDNQ92626 1479 aa16.63■□□□□ 0.25
RFX1-204ENST00000588885 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
RFX1-204ENST00000588885 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
RFX1-204ENST00000588885 RGPD8O14715 1765 aaPredicted RBP16.63■□□□□ 0.25
RFX1-204ENST00000588885 SPATA31A3Q5VYP0 1347 aa16.62■□□□□ 0.25
RFX1-204ENST00000588885 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
RFX1-204ENST00000588885 FMN2Q9NZ56 1722 aa16.61■□□□□ 0.25
RFX1-204ENST00000588885 KIF1AQ12756 1690 aa16.6■□□□□ 0.25
RFX1-204ENST00000588885 CABLES1Q8TDN4 633 aa16.6■□□□□ 0.25
RFX1-204ENST00000588885 CDK19Q9BWU1 502 aa16.6■□□□□ 0.25
RFX1-204ENST00000588885 USP21Q9UK80 565 aa16.6■□□□□ 0.25
RFX1-204ENST00000588885 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
RFX1-204ENST00000588885 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
RFX1-204ENST00000588885 COL22A1Q8NFW1 1626 aaPredicted RBP16.59■□□□□ 0.25
RFX1-204ENST00000588885 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
RFX1-204ENST00000588885 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
RFX1-204ENST00000588885 ANKARQ7Z5J8 1434 aa16.57■□□□□ 0.24
RFX1-204ENST00000588885 RBM6P78332 1123 aaKnown RBP16.57■□□□□ 0.24
RFX1-204ENST00000588885 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
RFX1-204ENST00000588885 EIF3AQ14152 1382 aaKnown RBP16.55■□□□□ 0.24
RFX1-204ENST00000588885 FNBP4Q8N3X1 1017 aaPredicted RBP16.55■□□□□ 0.24
RFX1-204ENST00000588885 GPRASP1Q5JY77 1395 aa16.54■□□□□ 0.24
RFX1-204ENST00000588885 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
RFX1-204ENST00000588885 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
RFX1-204ENST00000588885 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
RFX1-204ENST00000588885 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
RFX1-204ENST00000588885 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
RFX1-204ENST00000588885 CABP2Q9NPB3 220 aa16.53■□□□□ 0.24
RFX1-204ENST00000588885 TRPC5Q9UL62 973 aaPredicted RBP16.53■□□□□ 0.24
RFX1-204ENST00000588885 RGS12O14924 1447 aa16.53■□□□□ 0.24
RFX1-204ENST00000588885 TNS3Q68CZ2 1445 aa16.53■□□□□ 0.24
RFX1-204ENST00000588885 ADGRB2O60241 1585 aa16.52■□□□□ 0.24
RFX1-204ENST00000588885 TULP4Q9NRJ4 1543 aa16.52■□□□□ 0.24
RFX1-204ENST00000588885 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
RFX1-204ENST00000588885 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
RFX1-204ENST00000588885 ROCK2O75116 1388 aaKnown RBP16.51■□□□□ 0.23
RFX1-204ENST00000588885 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms