RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 KIF1BO60333 1816 aa33.12■■■□□ 2.89
CAPNS1-205ENST00000588780 GJD4Q96KN9 370 aaPredicted RBP33.11■■■□□ 2.89
CAPNS1-205ENST00000588780 COL22A1Q8NFW1 1626 aaPredicted RBP33.1■■■□□ 2.89
CAPNS1-205ENST00000588780 MYOM2P54296 1465 aa33.08■■■□□ 2.89
CAPNS1-205ENST00000588780 BCL9LQ86UU0 1499 aa33.08■■■□□ 2.89
CAPNS1-205ENST00000588780 FOXO3O43524 673 aa33.08■■■□□ 2.89
CAPNS1-205ENST00000588780 HFM1A2PYH4 1435 aa33.08■■■□□ 2.89
CAPNS1-205ENST00000588780 PPARGC1BQ86YN6 1023 aaKnown RBP33.04■■■□□ 2.88
CAPNS1-205ENST00000588780 NUTM2FA1L443 756 aa33.03■■■□□ 2.88
CAPNS1-205ENST00000588780 SF3B2Q13435 895 aaKnown RBP33.02■■■□□ 2.88
CAPNS1-205ENST00000588780 LRPPRCP42704 1394 aaKnown RBP33.01■■■□□ 2.88
CAPNS1-205ENST00000588780 RPGRIP1LQ68CZ1 1315 aa33■■■□□ 2.87
CAPNS1-205ENST00000588780 PXDNQ92626 1479 aa32.99■■■□□ 2.87
CAPNS1-205ENST00000588780 UNC5CLQ8IV45 518 aa32.99■■■□□ 2.87
CAPNS1-205ENST00000588780 EP400Q96L91 3159 aa32.99■■■□□ 2.87
CAPNS1-205ENST00000588780 BLMP54132 1417 aaPredicted RBP32.98■■■□□ 2.87
CAPNS1-205ENST00000588780 MARF1Q9Y4F3 1742 aaKnown RBP32.98■■■□□ 2.87
CAPNS1-205ENST00000588780 HAP1P54257 671 aaPredicted RBP32.96■■■□□ 2.87
CAPNS1-205ENST00000588780 DEFB132Q7Z7B7 95 aa32.96■■■□□ 2.87
CAPNS1-205ENST00000588780 STK26Q9P289 416 aa32.96■■■□□ 2.87
CAPNS1-205ENST00000588780 PRAG1Q86YV5 1406 aa32.95■■■□□ 2.87
CAPNS1-205ENST00000588780 CDC42BPGQ6DT37 1551 aa32.95■■■□□ 2.86
CAPNS1-205ENST00000588780 RALGAPBQ86X10 1494 aa32.93■■■□□ 2.86
CAPNS1-205ENST00000588780 PLEKHG5O94827 1062 aa32.92■■■□□ 2.86
CAPNS1-205ENST00000588780 NAIPQ13075 1403 aa32.92■■■□□ 2.86
CAPNS1-205ENST00000588780 CCDC9Q9Y3X0 531 aaKnown RBP32.91■■■□□ 2.86
CAPNS1-205ENST00000588780 WAPLQ7Z5K2 1190 aa32.9■■■□□ 2.86
CAPNS1-205ENST00000588780 SEPT12Q8IYM1 358 aa32.88■■■□□ 2.85
CAPNS1-205ENST00000588780 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.87■■■□□ 2.85
CAPNS1-205ENST00000588780 GLI3P10071 1580 aa32.87■■■□□ 2.85
CAPNS1-205ENST00000588780 SLC4A1APQ9BWU0 796 aaKnown RBP32.86■■■□□ 2.85
CAPNS1-205ENST00000588780 SPATA31A3Q5VYP0 1347 aa32.85■■■□□ 2.85
CAPNS1-205ENST00000588780 SLIT2O94813 1529 aa32.85■■■□□ 2.85
CAPNS1-205ENST00000588780 PPLO60437 1756 aa32.84■■■□□ 2.85
CAPNS1-205ENST00000588780 A0A0G2JS52 829 aa32.83■■■□□ 2.85
CAPNS1-205ENST00000588780 MYT1Q01538 1121 aa32.83■■■□□ 2.85
CAPNS1-205ENST00000588780 KRT28Q7Z3Y7 464 aa32.83■■■□□ 2.85
CAPNS1-205ENST00000588780 CCDC144AA2RUR9 1427 aa32.8■■■□□ 2.84
CAPNS1-205ENST00000588780 BRWD3Q6RI45 1802 aa32.8■■■□□ 2.84
CAPNS1-205ENST00000588780 LMOD2Q6P5Q4 547 aa32.8■■■□□ 2.84
CAPNS1-205ENST00000588780 ADGRF5Q8IZF2 1346 aa32.79■■■□□ 2.84
CAPNS1-205ENST00000588780 RGL3Q3MIN7 710 aa32.79■■■□□ 2.84
CAPNS1-205ENST00000588780 VPS72Q15906 364 aa32.78■■■□□ 2.84
CAPNS1-205ENST00000588780 KRT27Q7Z3Y8 459 aa32.78■■■□□ 2.84
CAPNS1-205ENST00000588780 CABLES1Q8TDN4 633 aa32.78■■■□□ 2.84
CAPNS1-205ENST00000588780 USP32Q8NFA0 1604 aa32.77■■■□□ 2.84
CAPNS1-205ENST00000588780 PSDA5PKW4 1024 aaPredicted RBP32.77■■■□□ 2.84
CAPNS1-205ENST00000588780 TMEM132EQ6IEE7 984 aa32.77■■■□□ 2.84
CAPNS1-205ENST00000588780 PSME1Q06323 249 aa32.76■■■□□ 2.83
CAPNS1-205ENST00000588780 PLEKHH1Q9ULM0 1364 aa32.75■■■□□ 2.83
CAPNS1-205ENST00000588780 RRBP1Q9P2E9 1410 aaKnown RBP32.75■■■□□ 2.83
CAPNS1-205ENST00000588780 BAG6P46379 1132 aa32.74■■■□□ 2.83
CAPNS1-205ENST00000588780 KIF1AQ12756 1690 aa32.73■■■□□ 2.83
CAPNS1-205ENST00000588780 TECPR2O15040 1411 aa32.71■■■□□ 2.83
CAPNS1-205ENST00000588780 PHF8Q9UPP1 1060 aa32.71■■■□□ 2.83
CAPNS1-205ENST00000588780 ABCC11Q96J66 1382 aa32.7■■■□□ 2.83
CAPNS1-205ENST00000588780 LRP5O75197 1615 aa32.69■■■□□ 2.82
CAPNS1-205ENST00000588780 TNS3Q68CZ2 1445 aa32.69■■■□□ 2.82
CAPNS1-205ENST00000588780 FMN2Q9NZ56 1722 aa32.69■■■□□ 2.82
CAPNS1-205ENST00000588780 ONECUT3O60422 494 aaPredicted RBP32.66■■■□□ 2.82
CAPNS1-205ENST00000588780 ANKRD30BQ9BXX2 1392 aa32.66■■■□□ 2.82
CAPNS1-205ENST00000588780 HRCP23327 699 aa32.64■■■□□ 2.82
CAPNS1-205ENST00000588780 PLCH1Q4KWH8 1693 aa32.64■■■□□ 2.82
CAPNS1-205ENST00000588780 FAM98CQ17RN3 349 aaKnown RBP32.63■■■□□ 2.81
CAPNS1-205ENST00000588780 YTHDC2Q9H6S0 1430 aaKnown RBP32.62■■■□□ 2.81
CAPNS1-205ENST00000588780 ARHGEF10O15013 1369 aa32.61■■■□□ 2.81
CAPNS1-205ENST00000588780 KNDC1Q76NI1 1749 aa32.61■■■□□ 2.81
CAPNS1-205ENST00000588780 NWD2Q9ULI1 1742 aa32.61■■■□□ 2.81
CAPNS1-205ENST00000588780 FAM83GA6ND36 823 aa32.61■■■□□ 2.81
CAPNS1-205ENST00000588780 SAFB2Q14151 953 aaKnown RBP eCLIP32.59■■■□□ 2.81
CAPNS1-205ENST00000588780 SBNO1A3KN83 1393 aa32.58■■■□□ 2.81
CAPNS1-205ENST00000588780 EN1Q05925 392 aaPredicted RBP32.58■■■□□ 2.81
CAPNS1-205ENST00000588780 RGPD8O14715 1765 aaPredicted RBP32.57■■■□□ 2.8
CAPNS1-205ENST00000588780 PMFBP1Q8TBY8 1022 aa32.56■■■□□ 2.8
CAPNS1-205ENST00000588780 BTG4Q9NY30 223 aa32.56■■■□□ 2.8
CAPNS1-205ENST00000588780 IFT172Q9UG01 1749 aa32.55■■■□□ 2.8
CAPNS1-205ENST00000588780 PIK3C2GO75747 1445 aa32.54■■■□□ 2.8
CAPNS1-205ENST00000588780 R3HDM1Q15032 1099 aaKnown RBP32.54■■■□□ 2.8
CAPNS1-205ENST00000588780 SPATA31E1Q6ZUB1 1445 aa32.53■■■□□ 2.8
CAPNS1-205ENST00000588780 FAM182BQ5T319 152 aa32.53■■■□□ 2.8
CAPNS1-205ENST00000588780 SIRT1Q96EB6 747 aa32.53■■■□□ 2.8
CAPNS1-205ENST00000588780 NRXN1Q9ULB1 1477 aa32.52■■■□□ 2.8
CAPNS1-205ENST00000588780 DHX57Q6P158 1386 aaKnown RBP32.5■■■□□ 2.79
CAPNS1-205ENST00000588780 PRAM1Q96QH2 718 aa32.5■■■□□ 2.79
CAPNS1-205ENST00000588780 POGKQ9P215 609 aa32.5■■■□□ 2.79
CAPNS1-205ENST00000588780 ABCA3Q99758 1704 aa32.5■■■□□ 2.79
CAPNS1-205ENST00000588780 C14orf93Q9H972 538 aaKnown RBP32.46■■■□□ 2.79
CAPNS1-205ENST00000588780 CFAP70Q5T0N1 1121 aa32.45■■■□□ 2.79
CAPNS1-205ENST00000588780 RGPD1P0DJD0 1748 aa32.44■■■□□ 2.78
CAPNS1-205ENST00000588780 MPHOSPH9Q99550 1183 aa32.44■■■□□ 2.78
CAPNS1-205ENST00000588780 GPRASP1Q5JY77 1395 aa32.44■■■□□ 2.78
CAPNS1-205ENST00000588780 NRAPQ86VF7 1730 aa32.41■■■□□ 2.78
CAPNS1-205ENST00000588780 EZH2Q15910 746 aaKnown RBP32.4■■■□□ 2.78
CAPNS1-205ENST00000588780 SPATA31A5Q5VU36 1347 aa32.4■■■□□ 2.78
CAPNS1-205ENST00000588780 SPATA31A7Q8IWB4 1347 aa32.4■■■□□ 2.78
CAPNS1-205ENST00000588780 COL14A1Q05707 1796 aaKnown RBP32.38■■■□□ 2.77
CAPNS1-205ENST00000588780 ANKARQ7Z5J8 1434 aa32.38■■■□□ 2.77
CAPNS1-205ENST00000588780 PAK3O75914 559 aaPredicted RBP32.38■■■□□ 2.77
CAPNS1-205ENST00000588780 PRDM11Q9NQV5 511 aa32.38■■■□□ 2.77
CAPNS1-205ENST00000588780 HIRIP3Q9BW71 556 aaPredicted RBP32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms