RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 GPATCH8Q9UKJ3 1502 aaKnown RBP9.1□□□□□ -0.95
CHUK-203ENST00000588656 TIAM1Q13009 1591 aa9.09□□□□□ -0.95
CHUK-203ENST00000588656 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
CHUK-203ENST00000588656 CRISPLD2Q9H0B8 497 aa9.09□□□□□ -0.95
CHUK-203ENST00000588656 SPAG9O60271 1321 aaKnown RBP9.08□□□□□ -0.96
CHUK-203ENST00000588656 GGT6Q6P531 493 aa9.08□□□□□ -0.96
CHUK-203ENST00000588656 OXER1Q8TDS5 423 aa9.08□□□□□ -0.96
CHUK-203ENST00000588656 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
CHUK-203ENST00000588656 A2MP01023 1474 aa9.08□□□□□ -0.96
CHUK-203ENST00000588656 ZNF644Q9H582 1327 aaPredicted RBP9.07□□□□□ -0.96
CHUK-203ENST00000588656 TK2O00142 265 aa9.07□□□□□ -0.96
CHUK-203ENST00000588656 ADGRD1Q6QNK2 874 aa9.07□□□□□ -0.96
CHUK-203ENST00000588656 CNTLNQ9NXG0 1405 aa9.06□□□□□ -0.96
CHUK-203ENST00000588656 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
CHUK-203ENST00000588656 GTPBP6O43824 516 aaPredicted RBP9.06□□□□□ -0.96
CHUK-203ENST00000588656 PPP1R15BQ5SWA1 713 aa9.06□□□□□ -0.96
CHUK-203ENST00000588656 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
CHUK-203ENST00000588656 UBAP1LF5GYI3 381 aa9.05□□□□□ -0.96
CHUK-203ENST00000588656 SOCS7O14512 581 aa9.05□□□□□ -0.96
CHUK-203ENST00000588656 CFDP1Q9UEE9 299 aaPredicted RBP9.05□□□□□ -0.96
CHUK-203ENST00000588656 PTPRKQ15262 1439 aa9.05□□□□□ -0.96
CHUK-203ENST00000588656 NPATQ14207 1427 aa9.04□□□□□ -0.96
CHUK-203ENST00000588656 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
CHUK-203ENST00000588656 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
CHUK-203ENST00000588656 CEP152O94986 1710 aa9.03□□□□□ -0.96
CHUK-203ENST00000588656 MTUS2Q5JR59 1369 aa9.03□□□□□ -0.96
CHUK-203ENST00000588656 PSEN2P49810 448 aa9.03□□□□□ -0.96
CHUK-203ENST00000588656 PIP4K2BP78356 416 aa9.03□□□□□ -0.96
CHUK-203ENST00000588656 UPF1Q92900 1129 aaKnown RBP eCLIP9.03□□□□□ -0.96
CHUK-203ENST00000588656 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
CHUK-203ENST00000588656 FBXO31Q5XUX0 539 aaPredicted RBP9.02□□□□□ -0.97
CHUK-203ENST00000588656 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
CHUK-203ENST00000588656 HCSTQ9UBK5 93 aa9.02□□□□□ -0.97
CHUK-203ENST00000588656 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.97
CHUK-203ENST00000588656 MED1Q15648 1581 aaPredicted RBP9.01□□□□□ -0.97
CHUK-203ENST00000588656 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
CHUK-203ENST00000588656 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
CHUK-203ENST00000588656 IQSEC2Q5JU85 1478 aa9.01□□□□□ -0.97
CHUK-203ENST00000588656 PLEKHH2Q8IVE3 1493 aa9.01□□□□□ -0.97
CHUK-203ENST00000588656 HRO43593 1189 aa9□□□□□ -0.97
CHUK-203ENST00000588656 CAMSAP2Q08AD1 1489 aa9□□□□□ -0.97
CHUK-203ENST00000588656 PLA2R1Q13018 1463 aa9□□□□□ -0.97
CHUK-203ENST00000588656 KIAA1107Q9UPP5 1409 aa8.99□□□□□ -0.97
CHUK-203ENST00000588656 ZNF454Q8N9F8 522 aa8.99□□□□□ -0.97
CHUK-203ENST00000588656 DDX27Q96GQ7 796 aaKnown RBP8.99□□□□□ -0.97
CHUK-203ENST00000588656 ANO8Q9HCE9 1232 aaPredicted RBP8.99□□□□□ -0.97
CHUK-203ENST00000588656 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
CHUK-203ENST00000588656 MBD5Q9P267 1494 aa8.99□□□□□ -0.97
CHUK-203ENST00000588656 KDM5DQ9BY66 1539 aa8.99□□□□□ -0.97
CHUK-203ENST00000588656 IQGAP1P46940 1657 aa8.98□□□□□ -0.97
CHUK-203ENST00000588656 KIF3BO15066 747 aa8.98□□□□□ -0.97
CHUK-203ENST00000588656 KCNK17Q96T54 332 aa8.98□□□□□ -0.97
CHUK-203ENST00000588656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHUK-203ENST00000588656 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
CHUK-203ENST00000588656 HSPA1LP34931 641 aa8.97□□□□□ -0.97
CHUK-203ENST00000588656 BCL2L12Q9HB09 334 aa8.97□□□□□ -0.97
CHUK-203ENST00000588656 VWDEQ8N2E2 1590 aa8.97□□□□□ -0.97
CHUK-203ENST00000588656 ALKQ9UM73 1620 aa8.97□□□□□ -0.97
CHUK-203ENST00000588656 TNRQ92752 1358 aa8.97□□□□□ -0.97
CHUK-203ENST00000588656 NCOA2Q15596 1464 aa8.96□□□□□ -0.97
CHUK-203ENST00000588656 CCDC141Q6ZP82 1450 aa8.96□□□□□ -0.97
CHUK-203ENST00000588656 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
CHUK-203ENST00000588656 MFSD10Q14728 455 aa8.96□□□□□ -0.98
CHUK-203ENST00000588656 CEP162Q5TB80 1403 aa8.96□□□□□ -0.98
CHUK-203ENST00000588656 UGGT1Q9NYU2 1555 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 EVI5O60447 810 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 FOSBP53539 338 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 VPS9D1Q9Y2B5 631 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 PZPP20742 1482 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 SHANK2Q9UPX8 1470 aa8.95□□□□□ -0.98
CHUK-203ENST00000588656 UBR1Q8IWV7 1749 aa8.94□□□□□ -0.98
CHUK-203ENST00000588656 PTPREP23469 700 aa8.94□□□□□ -0.98
CHUK-203ENST00000588656 DHX29Q7Z478 1369 aaKnown RBP8.94□□□□□ -0.98
CHUK-203ENST00000588656 ZC3H13Q5T200 1668 aaKnown RBP8.94□□□□□ -0.98
CHUK-203ENST00000588656 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
CHUK-203ENST00000588656 CPS1P31327 1500 aa8.93□□□□□ -0.98
CHUK-203ENST00000588656 MROH1Q8NDA8 1641 aa8.93□□□□□ -0.98
CHUK-203ENST00000588656 RNF17Q9BXT8 1623 aaKnown RBP8.93□□□□□ -0.98
CHUK-203ENST00000588656 DEPDC5O75140 1603 aa8.92□□□□□ -0.98
CHUK-203ENST00000588656 ZDHHC16Q969W1 377 aa8.92□□□□□ -0.98
CHUK-203ENST00000588656 PLA2G2EQ9NZK7 142 aa8.92□□□□□ -0.98
CHUK-203ENST00000588656 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
CHUK-203ENST00000588656 ARHGEF5Q12774 1597 aa8.91□□□□□ -0.98
CHUK-203ENST00000588656 ABCC3O15438 1527 aa8.91□□□□□ -0.98
CHUK-203ENST00000588656 RTEL1-TNFRSF6BF6WH68 1400 aa8.91□□□□□ -0.98
CHUK-203ENST00000588656 NPHP4O75161 1426 aaPredicted RBP8.91□□□□□ -0.98
CHUK-203ENST00000588656 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
CHUK-203ENST00000588656 MYO5BQ9ULV0 1848 aa8.91□□□□□ -0.98
CHUK-203ENST00000588656 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.98
CHUK-203ENST00000588656 MIA2Q96PC5 1412 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 SETD1AO15047 1707 aaKnown RBP8.89□□□□□ -0.99
CHUK-203ENST00000588656 TOM1O60784 492 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 ANKLE2Q86XL3 938 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 PIK3C2BO00750 1634 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 EIF2AK4Q9P2K8 1649 aaKnown RBP8.89□□□□□ -0.99
CHUK-203ENST00000588656 SYNMO15061 1565 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 LRRC7Q96NW7 1537 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 ERVK-7P63135 1459 aa8.89□□□□□ -0.99
CHUK-203ENST00000588656 MAST1Q9Y2H9 1570 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms