RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
RETREG3-206ENST00000588423 PHLPP1O60346 1717 aa23.17■■□□□ 1.3
RETREG3-206ENST00000588423 PRAM1Q96QH2 718 aa23.16■■□□□ 1.3
RETREG3-206ENST00000588423 TRAK1Q9UPV9 953 aa23.14■■□□□ 1.29
RETREG3-206ENST00000588423 COL16A1Q07092 1604 aaPredicted RBP23.14■■□□□ 1.29
RETREG3-206ENST00000588423 POGKQ9P215 609 aa23.13■■□□□ 1.29
RETREG3-206ENST00000588423 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
RETREG3-206ENST00000588423 NHSL1Q5SYE7 1610 aa23.11■■□□□ 1.29
RETREG3-206ENST00000588423 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
RETREG3-206ENST00000588423 JCADQ9P266 1359 aa23.1■■□□□ 1.29
RETREG3-206ENST00000588423 MED1Q15648 1581 aaPredicted RBP23.1■■□□□ 1.29
RETREG3-206ENST00000588423 FMN2Q9NZ56 1722 aa23.09■■□□□ 1.29
RETREG3-206ENST00000588423 ARHGEF28Q8N1W1 1705 aaKnown RBP23.08■■□□□ 1.29
RETREG3-206ENST00000588423 NBPF1Q3BBV0 1214 aa23.08■■□□□ 1.29
RETREG3-206ENST00000588423 ORAI2Q96SN7 254 aa23.08■■□□□ 1.29
RETREG3-206ENST00000588423 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
RETREG3-206ENST00000588423 DISP3Q9P2K9 1392 aa23.07■■□□□ 1.28
RETREG3-206ENST00000588423 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
RETREG3-206ENST00000588423 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
RETREG3-206ENST00000588423 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
RETREG3-206ENST00000588423 CLSPNQ9HAW4 1339 aa23.03■■□□□ 1.28
RETREG3-206ENST00000588423 ANKARQ7Z5J8 1434 aa23.02■■□□□ 1.28
RETREG3-206ENST00000588423 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
RETREG3-206ENST00000588423 SHPRHQ149N8 1683 aa23.02■■□□□ 1.28
RETREG3-206ENST00000588423 SOS2Q07890 1332 aaPredicted RBP23.02■■□□□ 1.28
RETREG3-206ENST00000588423 EIF3AQ14152 1382 aaKnown RBP23.01■■□□□ 1.27
RETREG3-206ENST00000588423 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
RETREG3-206ENST00000588423 SPATA31A6Q5VVP1 1343 aa23.01■■□□□ 1.27
RETREG3-206ENST00000588423 NPHP3Q7Z494 1330 aa23.01■■□□□ 1.27
RETREG3-206ENST00000588423 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
RETREG3-206ENST00000588423 DDX17Q92841 729 aaKnown RBP23■■□□□ 1.27
RETREG3-206ENST00000588423 KIF1AQ12756 1690 aa23■■□□□ 1.27
RETREG3-206ENST00000588423 WASLO00401 505 aaPredicted RBP22.99■■□□□ 1.27
RETREG3-206ENST00000588423 ROCK2O75116 1388 aaKnown RBP22.99■■□□□ 1.27
RETREG3-206ENST00000588423 NBPF8Q3BBV2 869 aa22.98■■□□□ 1.27
RETREG3-206ENST00000588423 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
RETREG3-206ENST00000588423 GPRASP1Q5JY77 1395 aa22.98■■□□□ 1.27
RETREG3-206ENST00000588423 TULP4Q9NRJ4 1543 aa22.98■■□□□ 1.27
RETREG3-206ENST00000588423 USP32Q8NFA0 1604 aa22.96■■□□□ 1.27
RETREG3-206ENST00000588423 PXDNQ92626 1479 aa22.95■■□□□ 1.26
RETREG3-206ENST00000588423 CENPJQ9HC77 1338 aaPredicted RBP22.95■■□□□ 1.26
RETREG3-206ENST00000588423 FOXO3O43524 673 aa22.94■■□□□ 1.26
RETREG3-206ENST00000588423 PHF8Q9UPP1 1060 aa22.94■■□□□ 1.26
RETREG3-206ENST00000588423 RALGAPBQ86X10 1494 aa22.93■■□□□ 1.26
RETREG3-206ENST00000588423 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
RETREG3-206ENST00000588423 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
RETREG3-206ENST00000588423 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
RETREG3-206ENST00000588423 RGPD8O14715 1765 aaPredicted RBP22.91■■□□□ 1.26
RETREG3-206ENST00000588423 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
RETREG3-206ENST00000588423 LRP6O75581 1613 aa22.9■■□□□ 1.26
RETREG3-206ENST00000588423 ATP7BP35670 1465 aa22.89■■□□□ 1.25
RETREG3-206ENST00000588423 QRICH2Q9H0J4 1663 aa22.88■■□□□ 1.25
RETREG3-206ENST00000588423 CDK19Q9BWU1 502 aa22.88■■□□□ 1.25
RETREG3-206ENST00000588423 COL22A1Q8NFW1 1626 aaPredicted RBP22.86■■□□□ 1.25
RETREG3-206ENST00000588423 PSME1Q06323 249 aa22.86■■□□□ 1.25
RETREG3-206ENST00000588423 KRT28Q7Z3Y7 464 aa22.86■■□□□ 1.25
RETREG3-206ENST00000588423 NUDT16Q96DE0 195 aaKnown RBP22.86■■□□□ 1.25
RETREG3-206ENST00000588423 CARD11Q9BXL7 1154 aa22.86■■□□□ 1.25
RETREG3-206ENST00000588423 XPCQ01831 940 aaPredicted RBP22.85■■□□□ 1.25
RETREG3-206ENST00000588423 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
RETREG3-206ENST00000588423 PMFBP1Q8TBY8 1022 aa22.84■■□□□ 1.25
RETREG3-206ENST00000588423 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
RETREG3-206ENST00000588423 SPATA31A3Q5VYP0 1347 aa22.83■■□□□ 1.25
RETREG3-206ENST00000588423 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
RETREG3-206ENST00000588423 RGS17Q9UGC6 210 aaPredicted RBP22.83■■□□□ 1.25
RETREG3-206ENST00000588423 TOPAZ1Q8N9V7 1692 aa22.82■■□□□ 1.24
RETREG3-206ENST00000588423 SBNO2Q9Y2G9 1366 aa22.82■■□□□ 1.24
RETREG3-206ENST00000588423 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
RETREG3-206ENST00000588423 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
RETREG3-206ENST00000588423 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
RETREG3-206ENST00000588423 ILDR2Q71H61 639 aa22.82■■□□□ 1.24
RETREG3-206ENST00000588423 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
RETREG3-206ENST00000588423 CCDC61Q9Y6R9 512 aa22.82■■□□□ 1.24
RETREG3-206ENST00000588423 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
RETREG3-206ENST00000588423 EVC2Q86UK5 1308 aa22.81■■□□□ 1.24
RETREG3-206ENST00000588423 PLEKHG3A1L390 1219 aa22.79■■□□□ 1.24
RETREG3-206ENST00000588423 SRPK2P78362 688 aaKnown RBP22.79■■□□□ 1.24
RETREG3-206ENST00000588423 POLR3AO14802 1390 aaPredicted RBP22.78■■□□□ 1.24
RETREG3-206ENST00000588423 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
RETREG3-206ENST00000588423 ARHGEF10O15013 1369 aa22.77■■□□□ 1.24
RETREG3-206ENST00000588423 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.23
RETREG3-206ENST00000588423 CABP2Q9NPB3 220 aa22.76■■□□□ 1.23
RETREG3-206ENST00000588423 ZNF772Q68DY9 489 aaPredicted RBP22.74■■□□□ 1.23
RETREG3-206ENST00000588423 PPIP5K1Q6PFW1 1433 aa22.74■■□□□ 1.23
RETREG3-206ENST00000588423 ACEP12821 1306 aa22.73■■□□□ 1.23
RETREG3-206ENST00000588423 ALS2Q96Q42 1657 aa22.71■■□□□ 1.23
RETREG3-206ENST00000588423 POTEAQ6S8J7 498 aa22.71■■□□□ 1.23
RETREG3-206ENST00000588423 SLC24A1O60721 1099 aa22.7■■□□□ 1.22
RETREG3-206ENST00000588423 ADAMTS2O95450 1211 aa22.7■■□□□ 1.22
RETREG3-206ENST00000588423 C8orf37Q96NL8 207 aa22.7■■□□□ 1.22
RETREG3-206ENST00000588423 ATAD2Q6PL18 1390 aa22.7■■□□□ 1.22
RETREG3-206ENST00000588423 BRD4O60885 1362 aaPredicted RBP22.69■■□□□ 1.22
RETREG3-206ENST00000588423 AFF2P51816 1311 aa22.69■■□□□ 1.22
RETREG3-206ENST00000588423 LMOD2Q6P5Q4 547 aa22.68■■□□□ 1.22
RETREG3-206ENST00000588423 CABP1Q9NZU7 370 aa22.68■■□□□ 1.22
RETREG3-206ENST00000588423 NGLY1Q96IV0 654 aa22.67■■□□□ 1.22
RETREG3-206ENST00000588423 PUS7Q96PZ0 661 aaKnown RBP22.67■■□□□ 1.22
RETREG3-206ENST00000588423 MARF1Q9Y4F3 1742 aaKnown RBP22.66■■□□□ 1.22
RETREG3-206ENST00000588423 ST20-MTHFSA0A0A6YYL1 179 aa22.66■■□□□ 1.22
RETREG3-206ENST00000588423 PAK3O75914 559 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms