RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 GAS2L3Q86XJ1 694 aa21.2■□□□□ 0.99
SSC5D-203ENST00000588254 ZKSCAN2Q63HK3 967 aa21.2■□□□□ 0.98
SSC5D-203ENST00000588254 KIF3BO15066 747 aa21.2■□□□□ 0.98
SSC5D-203ENST00000588254 NSD3Q9BZ95 1437 aa21.19■□□□□ 0.98
SSC5D-203ENST00000588254 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
SSC5D-203ENST00000588254 RBM42Q9BTD8 480 aaKnown RBP21.19■□□□□ 0.98
SSC5D-203ENST00000588254 C1orf115Q9H7X2 142 aa21.19■□□□□ 0.98
SSC5D-203ENST00000588254 CDC42BPBQ9Y5S2 1711 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 CLCN1P35523 988 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 ESPNB1AK53 854 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 TRIM27P14373 513 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 ZMYND15Q9H091 742 aa21.18■□□□□ 0.98
SSC5D-203ENST00000588254 MRE11P49959 708 aa21.17■□□□□ 0.98
SSC5D-203ENST00000588254 TNPO1Q92973 898 aaKnown RBP21.17■□□□□ 0.98
SSC5D-203ENST00000588254 NUP160Q12769 1436 aa21.17■□□□□ 0.98
SSC5D-203ENST00000588254 ARHGEF5Q12774 1597 aa21.16■□□□□ 0.98
SSC5D-203ENST00000588254 GLIPR1L2Q4G1C9 344 aa21.15■□□□□ 0.98
SSC5D-203ENST00000588254 SSH1Q8WYL5 1049 aa21.15■□□□□ 0.98
SSC5D-203ENST00000588254 NOB1Q9ULX3 412 aaKnown RBP21.15■□□□□ 0.98
SSC5D-203ENST00000588254 CD2BP2O95400 341 aaKnown RBP21.15■□□□□ 0.98
SSC5D-203ENST00000588254 NCLP19338 710 aaKnown RBP21.15■□□□□ 0.98
SSC5D-203ENST00000588254 ABCC2Q92887 1545 aa21.15■□□□□ 0.98
SSC5D-203ENST00000588254 SPAG9O60271 1321 aaKnown RBP21.14■□□□□ 0.98
SSC5D-203ENST00000588254 TMEM57Q8N5G2 664 aa21.14■□□□□ 0.98
SSC5D-203ENST00000588254 ELL2O00472 640 aaPredicted RBP21.13■□□□□ 0.97
SSC5D-203ENST00000588254 TTC37Q6PGP7 1564 aa21.13■□□□□ 0.97
SSC5D-203ENST00000588254 SYNMO15061 1565 aa21.13■□□□□ 0.97
SSC5D-203ENST00000588254 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
SSC5D-203ENST00000588254 UGGT1Q9NYU2 1555 aa21.11■□□□□ 0.97
SSC5D-203ENST00000588254 VIRMAQ69YN4 1812 aaKnown RBP21.11■□□□□ 0.97
SSC5D-203ENST00000588254 TRAPPC8Q9Y2L5 1435 aa21.11■□□□□ 0.97
SSC5D-203ENST00000588254 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
SSC5D-203ENST00000588254 DDX11L8A8MPP1 907 aa21.1■□□□□ 0.97
SSC5D-203ENST00000588254 ERVK-7P63135 1459 aa21.1■□□□□ 0.97
SSC5D-203ENST00000588254 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
SSC5D-203ENST00000588254 MADDQ8WXG6 1647 aa21.09■□□□□ 0.97
SSC5D-203ENST00000588254 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
SSC5D-203ENST00000588254 ANKRD45Q5TZF3 282 aa21.09■□□□□ 0.97
SSC5D-203ENST00000588254 GGNBP2Q9H3C7 697 aa21.09■□□□□ 0.97
SSC5D-203ENST00000588254 LAMC1P11047 1609 aa21.08■□□□□ 0.97
SSC5D-203ENST00000588254 SSFA2P28290 1259 aa21.08■□□□□ 0.97
SSC5D-203ENST00000588254 RBM10P98175 930 aaKnown RBP21.08■□□□□ 0.97
SSC5D-203ENST00000588254 CABP2Q9NPB3 220 aa21.08■□□□□ 0.96
SSC5D-203ENST00000588254 UNC13BO14795 1591 aa21.07■□□□□ 0.96
SSC5D-203ENST00000588254 ZNF692Q9BU19 519 aaPredicted RBP21.07■□□□□ 0.96
SSC5D-203ENST00000588254 MAST1Q9Y2H9 1570 aa21.07■□□□□ 0.96
SSC5D-203ENST00000588254 FBLN1P23142 703 aa21.07■□□□□ 0.96
SSC5D-203ENST00000588254 WDR63Q8IWG1 891 aa21.07■□□□□ 0.96
SSC5D-203ENST00000588254 MYOM1P52179 1685 aa21.06■□□□□ 0.96
SSC5D-203ENST00000588254 POLR3AO14802 1390 aaPredicted RBP21.06■□□□□ 0.96
SSC5D-203ENST00000588254 PREX2Q70Z35 1606 aa21.06■□□□□ 0.96
SSC5D-203ENST00000588254 IQGAP3Q86VI3 1631 aa21.06■□□□□ 0.96
SSC5D-203ENST00000588254 ATF7IPQ6VMQ6 1270 aa21.06■□□□□ 0.96
SSC5D-203ENST00000588254 STK26Q9P289 416 aa21.06■□□□□ 0.96
SSC5D-203ENST00000588254 RTEL1-TNFRSF6BF6WH68 1400 aa21.05■□□□□ 0.96
SSC5D-203ENST00000588254 ATP10AO60312 1499 aa21.05■□□□□ 0.96
SSC5D-203ENST00000588254 RNF17Q9BXT8 1623 aaKnown RBP21.05■□□□□ 0.96
SSC5D-203ENST00000588254 APBB1O00213 710 aa21.05■□□□□ 0.96
SSC5D-203ENST00000588254 FOXD4L5Q5VV16 416 aaPredicted RBP21.05■□□□□ 0.96
SSC5D-203ENST00000588254 FOXD4L4Q8WXT5 416 aaPredicted RBP21.05■□□□□ 0.96
SSC5D-203ENST00000588254 NPC1L1Q9UHC9 1359 aa21.04■□□□□ 0.96
SSC5D-203ENST00000588254 CHAMP1Q96JM3 812 aa21.04■□□□□ 0.96
SSC5D-203ENST00000588254 DDX19BQ9UMR2 479 aa21.04■□□□□ 0.96
SSC5D-203ENST00000588254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.04■□□□□ 0.96
SSC5D-203ENST00000588254 TPRNQ4KMQ1 711 aa21.03■□□□□ 0.96
SSC5D-203ENST00000588254 THUMPD2Q9BTF0 503 aaKnown RBP21.03■□□□□ 0.96
SSC5D-203ENST00000588254 IQGAP1P46940 1657 aa21.03■□□□□ 0.96
SSC5D-203ENST00000588254 GBP4Q96PP9 640 aa21.03■□□□□ 0.96
SSC5D-203ENST00000588254 DDX49Q9Y6V7 483 aaKnown RBP21.03■□□□□ 0.96
SSC5D-203ENST00000588254 KDM5AP29375 1690 aaKnown RBP21.02■□□□□ 0.96
SSC5D-203ENST00000588254 DUOX2Q9NRD8 1548 aa21.02■□□□□ 0.96
SSC5D-203ENST00000588254 KIAA1211Q6ZU35 1233 aa21.01■□□□□ 0.95
SSC5D-203ENST00000588254 RIPK4P57078 832 aa21.01■□□□□ 0.95
SSC5D-203ENST00000588254 NGEFQ8N5V2 710 aa21.01■□□□□ 0.95
SSC5D-203ENST00000588254 GAS2L2Q8NHY3 880 aa21.01■□□□□ 0.95
SSC5D-203ENST00000588254 NASPP49321 788 aaPredicted RBP20.99■□□□□ 0.95
SSC5D-203ENST00000588254 CHD1LQ86WJ1 897 aa20.99■□□□□ 0.95
SSC5D-203ENST00000588254 TMPOP42166 694 aaKnown RBP20.98■□□□□ 0.95
SSC5D-203ENST00000588254 CLTCL1P53675 1640 aa20.98■□□□□ 0.95
SSC5D-203ENST00000588254 RRP9O43818 475 aaKnown RBP20.98■□□□□ 0.95
SSC5D-203ENST00000588254 MCTP1Q6DN14 999 aa20.98■□□□□ 0.95
SSC5D-203ENST00000588254 GGT6Q6P531 493 aa20.97■□□□□ 0.95
SSC5D-203ENST00000588254 CAVIN1Q6NZI2 390 aaKnown RBP20.97■□□□□ 0.95
SSC5D-203ENST00000588254 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
SSC5D-203ENST00000588254 CFAP65Q6ZU64 1925 aaKnown RBP20.97■□□□□ 0.95
SSC5D-203ENST00000588254 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
SSC5D-203ENST00000588254 SMC5Q8IY18 1101 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 MPNDQ8N594 471 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 CEP152O94986 1710 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 TRIM35Q9UPQ4 493 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 PTPRTO14522 1441 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 HDAC1Q13547 482 aaPredicted RBP20.96■□□□□ 0.95
SSC5D-203ENST00000588254 PKP1Q13835 747 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 ZBTB40Q9NUA8 1239 aa20.96■□□□□ 0.95
SSC5D-203ENST00000588254 TBC1D9Q6ZT07 1266 aa20.95■□□□□ 0.94
SSC5D-203ENST00000588254 FAM13BQ9NYF5 915 aa20.95■□□□□ 0.94
SSC5D-203ENST00000588254 AK9Q5TCS8 1911 aa20.95■□□□□ 0.94
SSC5D-203ENST00000588254 NOS1P29475 1434 aa20.95■□□□□ 0.94
SSC5D-203ENST00000588254 RAB3GAP1Q15042 981 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms