RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
SDHDP1-201ENST00000588055 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
SDHDP1-201ENST00000588055 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
SDHDP1-201ENST00000588055 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
SDHDP1-201ENST00000588055 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
SDHDP1-201ENST00000588055 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.3
SDHDP1-201ENST00000588055 ADGRB2O60241 1585 aa16.89■□□□□ 0.3
SDHDP1-201ENST00000588055 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDHDP1-201ENST00000588055 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
SDHDP1-201ENST00000588055 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
SDHDP1-201ENST00000588055 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
SDHDP1-201ENST00000588055 NBPF8Q3BBV2 869 aa16.87■□□□□ 0.29
SDHDP1-201ENST00000588055 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
SDHDP1-201ENST00000588055 QRICH2Q9H0J4 1663 aa16.87■□□□□ 0.29
SDHDP1-201ENST00000588055 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
SDHDP1-201ENST00000588055 MST1RQ04912 1400 aa16.86■□□□□ 0.29
SDHDP1-201ENST00000588055 FMN2Q9NZ56 1722 aa16.85■□□□□ 0.29
SDHDP1-201ENST00000588055 ILDR1Q86SU0 546 aaPredicted RBP16.85■□□□□ 0.29
SDHDP1-201ENST00000588055 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
SDHDP1-201ENST00000588055 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.28
SDHDP1-201ENST00000588055 C1orf167Q5SNV9 1468 aa16.82■□□□□ 0.28
SDHDP1-201ENST00000588055 HIRIP3Q9BW71 556 aaPredicted RBP16.81■□□□□ 0.28
SDHDP1-201ENST00000588055 KIF1AQ12756 1690 aa16.8■□□□□ 0.28
SDHDP1-201ENST00000588055 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
SDHDP1-201ENST00000588055 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
SDHDP1-201ENST00000588055 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
SDHDP1-201ENST00000588055 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
SDHDP1-201ENST00000588055 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
SDHDP1-201ENST00000588055 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
SDHDP1-201ENST00000588055 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
SDHDP1-201ENST00000588055 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
SDHDP1-201ENST00000588055 WASLO00401 505 aaPredicted RBP16.76■□□□□ 0.27
SDHDP1-201ENST00000588055 ESCO1Q5FWF5 840 aa16.76■□□□□ 0.27
SDHDP1-201ENST00000588055 USP47Q96K76 1375 aa16.76■□□□□ 0.27
SDHDP1-201ENST00000588055 HSPA1LP34931 641 aa16.75■□□□□ 0.27
SDHDP1-201ENST00000588055 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
SDHDP1-201ENST00000588055 EVC2Q86UK5 1308 aa16.74■□□□□ 0.27
SDHDP1-201ENST00000588055 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
SDHDP1-201ENST00000588055 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
SDHDP1-201ENST00000588055 RGPD8O14715 1765 aaPredicted RBP16.73■□□□□ 0.27
SDHDP1-201ENST00000588055 ATP7BP35670 1465 aa16.73■□□□□ 0.27
SDHDP1-201ENST00000588055 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
SDHDP1-201ENST00000588055 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
SDHDP1-201ENST00000588055 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
SDHDP1-201ENST00000588055 ORAI2Q96SN7 254 aa16.71■□□□□ 0.27
SDHDP1-201ENST00000588055 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
SDHDP1-201ENST00000588055 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
SDHDP1-201ENST00000588055 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
SDHDP1-201ENST00000588055 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
SDHDP1-201ENST00000588055 ATAD2Q6PL18 1390 aa16.67■□□□□ 0.26
SDHDP1-201ENST00000588055 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
SDHDP1-201ENST00000588055 PRR36Q9H6K5 1346 aa16.67■□□□□ 0.26
SDHDP1-201ENST00000588055 JCADQ9P266 1359 aa16.66■□□□□ 0.26
SDHDP1-201ENST00000588055 CABP2Q9NPB3 220 aa16.66■□□□□ 0.26
SDHDP1-201ENST00000588055 CCDC61Q9Y6R9 512 aa16.66■□□□□ 0.26
SDHDP1-201ENST00000588055 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 PPIP5K1Q6PFW1 1433 aa16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 FOXO3O43524 673 aa16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 PXDNQ92626 1479 aa16.65■□□□□ 0.26
SDHDP1-201ENST00000588055 TMF1P82094 1093 aa16.64■□□□□ 0.25
SDHDP1-201ENST00000588055 PMFBP1Q8TBY8 1022 aa16.64■□□□□ 0.25
SDHDP1-201ENST00000588055 DDX17Q92841 729 aaKnown RBP16.64■□□□□ 0.25
SDHDP1-201ENST00000588055 LRRC59Q96AG4 307 aaKnown RBP16.64■□□□□ 0.25
SDHDP1-201ENST00000588055 PSME1Q06323 249 aa16.63■□□□□ 0.25
SDHDP1-201ENST00000588055 SOS2Q07890 1332 aaPredicted RBP16.63■□□□□ 0.25
SDHDP1-201ENST00000588055 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
SDHDP1-201ENST00000588055 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
SDHDP1-201ENST00000588055 TESK2Q96S53 571 aa16.61■□□□□ 0.25
SDHDP1-201ENST00000588055 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
SDHDP1-201ENST00000588055 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
SDHDP1-201ENST00000588055 NINLQ9Y2I6 1382 aa16.6■□□□□ 0.25
SDHDP1-201ENST00000588055 SPATA31A6Q5VVP1 1343 aa16.59■□□□□ 0.25
SDHDP1-201ENST00000588055 SBNO1A3KN83 1393 aa16.59■□□□□ 0.25
SDHDP1-201ENST00000588055 POLR3AO14802 1390 aaPredicted RBP16.59■□□□□ 0.25
SDHDP1-201ENST00000588055 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 ACEP12821 1306 aa16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 PNPLA6Q8IY17 1366 aa16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 DISP3Q9P2K9 1392 aa16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 MED1Q15648 1581 aaPredicted RBP16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 TRPM3Q9HCF6 1732 aaPredicted RBP16.58■□□□□ 0.24
SDHDP1-201ENST00000588055 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
SDHDP1-201ENST00000588055 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
SDHDP1-201ENST00000588055 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
SDHDP1-201ENST00000588055 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
SDHDP1-201ENST00000588055 TMC1Q8TDI8 760 aa16.56■□□□□ 0.24
SDHDP1-201ENST00000588055 CABP1Q9NZU7 370 aa16.56■□□□□ 0.24
SDHDP1-201ENST00000588055 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
SDHDP1-201ENST00000588055 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
SDHDP1-201ENST00000588055 SPATA31A3Q5VYP0 1347 aa16.55■□□□□ 0.24
SDHDP1-201ENST00000588055 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
SDHDP1-201ENST00000588055 ALS2Q96Q42 1657 aa16.54■□□□□ 0.24
SDHDP1-201ENST00000588055 MEX3CQ5U5Q3 659 aaKnown RBP16.54■□□□□ 0.24
SDHDP1-201ENST00000588055 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
SDHDP1-201ENST00000588055 USP6P35125 1406 aa16.53■□□□□ 0.24
SDHDP1-201ENST00000588055 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
SDHDP1-201ENST00000588055 HAP1P54257 671 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms