RNA–Protein interactions for RNA: ENST00000588027.5

LINC00662-204, long intergenic non-protein coding RNA 662, humanhuman

TSL 5 BASIC

Gene LINC00662, Length 562 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-204ENST00000588027 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
LINC00662-204ENST00000588027 NUTM2EB1AL46 878 aaPredicted RBP17.93■□□□□ 0.46
LINC00662-204ENST00000588027 NUTM2AQ8IVF1 878 aaPredicted RBP17.93■□□□□ 0.46
LINC00662-204ENST00000588027 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
LINC00662-204ENST00000588027 YTHDC2Q9H6S0 1430 aaKnown RBP17.89■□□□□ 0.46
LINC00662-204ENST00000588027 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
LINC00662-204ENST00000588027 DDX17Q92841 729 aaKnown RBP17.89■□□□□ 0.45
LINC00662-204ENST00000588027 SOS2Q07890 1332 aaPredicted RBP17.89■□□□□ 0.45
LINC00662-204ENST00000588027 ORAI2Q96SN7 254 aa17.88■□□□□ 0.45
LINC00662-204ENST00000588027 STK26Q9P289 416 aa17.88■□□□□ 0.45
LINC00662-204ENST00000588027 AFF2P51816 1311 aa17.88■□□□□ 0.45
LINC00662-204ENST00000588027 NPHP3Q7Z494 1330 aa17.88■□□□□ 0.45
LINC00662-204ENST00000588027 DHX57Q6P158 1386 aaKnown RBP17.88■□□□□ 0.45
LINC00662-204ENST00000588027 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
LINC00662-204ENST00000588027 RXRBP28702 533 aa17.85■□□□□ 0.45
LINC00662-204ENST00000588027 ESCO1Q5FWF5 840 aa17.85■□□□□ 0.45
LINC00662-204ENST00000588027 COL22A1Q8NFW1 1626 aaPredicted RBP17.85■□□□□ 0.45
LINC00662-204ENST00000588027 C8orf37Q96NL8 207 aa17.85■□□□□ 0.45
LINC00662-204ENST00000588027 KIF1AQ12756 1690 aa17.84■□□□□ 0.45
LINC00662-204ENST00000588027 FMN2Q9NZ56 1722 aa17.84■□□□□ 0.45
LINC00662-204ENST00000588027 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.44
LINC00662-204ENST00000588027 C14orf93Q9H972 538 aaKnown RBP17.83■□□□□ 0.44
LINC00662-204ENST00000588027 PXDNQ92626 1479 aa17.82■□□□□ 0.44
LINC00662-204ENST00000588027 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
LINC00662-204ENST00000588027 WAPLQ7Z5K2 1190 aa17.82■□□□□ 0.44
LINC00662-204ENST00000588027 SIRT1Q96EB6 747 aa17.82■□□□□ 0.44
LINC00662-204ENST00000588027 DLC1Q96QB1 1528 aa17.81■□□□□ 0.44
LINC00662-204ENST00000588027 ADAMTS2O95450 1211 aa17.8■□□□□ 0.44
LINC00662-204ENST00000588027 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
LINC00662-204ENST00000588027 RBM6P78332 1123 aaKnown RBP17.78■□□□□ 0.44
LINC00662-204ENST00000588027 CFAP70Q5T0N1 1121 aa17.78■□□□□ 0.44
LINC00662-204ENST00000588027 NUTM2FA1L443 756 aa17.77■□□□□ 0.44
LINC00662-204ENST00000588027 FOXO3O43524 673 aa17.77■□□□□ 0.44
LINC00662-204ENST00000588027 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
LINC00662-204ENST00000588027 ADGRB1O14514 1584 aa17.76■□□□□ 0.43
LINC00662-204ENST00000588027 ADGRB2O60241 1585 aa17.76■□□□□ 0.43
LINC00662-204ENST00000588027 RGS12O14924 1447 aa17.76■□□□□ 0.43
LINC00662-204ENST00000588027 STAC3Q96MF2 364 aa17.76■□□□□ 0.43
LINC00662-204ENST00000588027 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
LINC00662-204ENST00000588027 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
LINC00662-204ENST00000588027 ANKARQ7Z5J8 1434 aa17.74■□□□□ 0.43
LINC00662-204ENST00000588027 XPCQ01831 940 aaPredicted RBP17.74■□□□□ 0.43
LINC00662-204ENST00000588027 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
LINC00662-204ENST00000588027 PRAM1Q96QH2 718 aa17.74■□□□□ 0.43
LINC00662-204ENST00000588027 POGKQ9P215 609 aa17.74■□□□□ 0.43
LINC00662-204ENST00000588027 USP21Q9UK80 565 aa17.74■□□□□ 0.43
LINC00662-204ENST00000588027 TRPC5Q9UL62 973 aaPredicted RBP17.73■□□□□ 0.43
LINC00662-204ENST00000588027 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
LINC00662-204ENST00000588027 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
LINC00662-204ENST00000588027 SAFB2Q14151 953 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■■□ 19.5
LINC00662-204ENST00000588027 FNBP4Q8N3X1 1017 aaPredicted RBP17.71■□□□□ 0.43
LINC00662-204ENST00000588027 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
LINC00662-204ENST00000588027 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00662-204ENST00000588027 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
LINC00662-204ENST00000588027 ATRNO75882 1429 aa17.71■□□□□ 0.43
LINC00662-204ENST00000588027 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
LINC00662-204ENST00000588027 PSME1Q06323 249 aa17.7■□□□□ 0.42
LINC00662-204ENST00000588027 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
LINC00662-204ENST00000588027 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
LINC00662-204ENST00000588027 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
LINC00662-204ENST00000588027 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
LINC00662-204ENST00000588027 ARHGEF10O15013 1369 aa17.68■□□□□ 0.42
LINC00662-204ENST00000588027 KRT28Q7Z3Y7 464 aa17.68■□□□□ 0.42
LINC00662-204ENST00000588027 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
LINC00662-204ENST00000588027 TULP4Q9NRJ4 1543 aa17.67■□□□□ 0.42
LINC00662-204ENST00000588027 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.67■□□□□ 0.42
LINC00662-204ENST00000588027 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
LINC00662-204ENST00000588027 TRAK1Q9UPV9 953 aa17.67■□□□□ 0.42
LINC00662-204ENST00000588027 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
LINC00662-204ENST00000588027 L3MBTL2Q969R5 705 aa17.66■□□□□ 0.42
LINC00662-204ENST00000588027 RGPD8O14715 1765 aaPredicted RBP17.66■□□□□ 0.42
LINC00662-204ENST00000588027 BCL9LQ86UU0 1499 aa17.65■□□□□ 0.42
LINC00662-204ENST00000588027 ARHGEF28Q8N1W1 1705 aaKnown RBP17.64■□□□□ 0.41
LINC00662-204ENST00000588027 SLIT2O94813 1529 aa17.63■□□□□ 0.41
LINC00662-204ENST00000588027 MINK1Q8N4C8 1332 aaPredicted RBP17.63■□□□□ 0.41
LINC00662-204ENST00000588027 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
LINC00662-204ENST00000588027 KIAA1210Q9ULL0 1709 aa17.62■□□□□ 0.41
LINC00662-204ENST00000588027 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
LINC00662-204ENST00000588027 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
LINC00662-204ENST00000588027 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
LINC00662-204ENST00000588027 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
LINC00662-204ENST00000588027 WASLO00401 505 aaPredicted RBP17.6■□□□□ 0.41
LINC00662-204ENST00000588027 UNC5CLQ8IV45 518 aa17.6■□□□□ 0.41
LINC00662-204ENST00000588027 PMFBP1Q8TBY8 1022 aa17.6■□□□□ 0.41
LINC00662-204ENST00000588027 TONSLQ96HA7 1378 aa17.6■□□□□ 0.41
LINC00662-204ENST00000588027 TRPM3Q9HCF6 1732 aaPredicted RBP17.59■□□□□ 0.41
LINC00662-204ENST00000588027 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
LINC00662-204ENST00000588027 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
LINC00662-204ENST00000588027 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
LINC00662-204ENST00000588027 ATP7BP35670 1465 aa17.57■□□□□ 0.4
LINC00662-204ENST00000588027 RALGAPBQ86X10 1494 aa17.57■□□□□ 0.4
LINC00662-204ENST00000588027 PRR36Q9H6K5 1346 aa17.57■□□□□ 0.4
LINC00662-204ENST00000588027 ALS2Q96Q42 1657 aa17.56■□□□□ 0.4
LINC00662-204ENST00000588027 TIMELESSQ9UNS1 1208 aa17.56■□□□□ 0.4
LINC00662-204ENST00000588027 GLI3P10071 1580 aa17.56■□□□□ 0.4
LINC00662-204ENST00000588027 NGDNQ8NEJ9 315 aaKnown RBP17.55■□□□□ 0.4
LINC00662-204ENST00000588027 CABLES1Q8TDN4 633 aa17.54■□□□□ 0.4
LINC00662-204ENST00000588027 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
LINC00662-204ENST00000588027 VPS72Q15906 364 aa17.53■□□□□ 0.4
LINC00662-204ENST00000588027 TOPAZ1Q8N9V7 1692 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms