RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
TRIM47-205ENST00000587774 NUTM2BA6NNL0 878 aaPredicted RBP27.86■■■□□ 2.05
TRIM47-205ENST00000587774 NUTM2EB1AL46 878 aaPredicted RBP27.86■■■□□ 2.05
TRIM47-205ENST00000587774 NUTM2AQ8IVF1 878 aaPredicted RBP27.86■■■□□ 2.05
TRIM47-205ENST00000587774 LRRC59Q96AG4 307 aaKnown RBP27.86■■■□□ 2.05
TRIM47-205ENST00000587774 KIF1AQ12756 1690 aa27.84■■■□□ 2.05
TRIM47-205ENST00000587774 ORAI2Q96SN7 254 aa27.84■■■□□ 2.05
TRIM47-205ENST00000587774 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
TRIM47-205ENST00000587774 STK26Q9P289 416 aa27.82■■■□□ 2.04
TRIM47-205ENST00000587774 ABCC11Q96J66 1382 aa27.82■■■□□ 2.04
TRIM47-205ENST00000587774 ZNF772Q68DY9 489 aaPredicted RBP27.81■■■□□ 2.04
TRIM47-205ENST00000587774 TMEM132EQ6IEE7 984 aa27.81■■■□□ 2.04
TRIM47-205ENST00000587774 PLEKHH1Q9ULM0 1364 aa27.81■■■□□ 2.04
TRIM47-205ENST00000587774 PXDNQ92626 1479 aa27.79■■■□□ 2.04
TRIM47-205ENST00000587774 SOS2Q07890 1332 aaPredicted RBP27.79■■■□□ 2.04
TRIM47-205ENST00000587774 WAPLQ7Z5K2 1190 aa27.78■■■□□ 2.04
TRIM47-205ENST00000587774 AFF2P51816 1311 aa27.75■■■□□ 2.03
TRIM47-205ENST00000587774 ADGRB1O14514 1584 aa27.73■■■□□ 2.03
TRIM47-205ENST00000587774 C14orf93Q9H972 538 aaKnown RBP27.72■■■□□ 2.03
TRIM47-205ENST00000587774 DLC1Q96QB1 1528 aa27.72■■■□□ 2.03
TRIM47-205ENST00000587774 USP32Q8NFA0 1604 aa27.71■■■□□ 2.03
TRIM47-205ENST00000587774 ADGRB2O60241 1585 aa27.71■■■□□ 2.03
TRIM47-205ENST00000587774 ESCO1Q5FWF5 840 aa27.71■■■□□ 2.03
TRIM47-205ENST00000587774 C8orf37Q96NL8 207 aa27.71■■■□□ 2.03
TRIM47-205ENST00000587774 CDK12Q9NYV4 1490 aaPredicted RBP27.7■■■□□ 2.03
TRIM47-205ENST00000587774 NPHP3Q7Z494 1330 aa27.7■■■□□ 2.03
TRIM47-205ENST00000587774 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.02
TRIM47-205ENST00000587774 ARHGEF28Q8N1W1 1705 aaKnown RBP27.7■■■□□ 2.02
TRIM47-205ENST00000587774 ABCA3Q99758 1704 aa27.7■■■□□ 2.02
TRIM47-205ENST00000587774 NUTM2FA1L443 756 aa27.69■■■□□ 2.02
TRIM47-205ENST00000587774 DHX57Q6P158 1386 aaKnown RBP27.68■■■□□ 2.02
TRIM47-205ENST00000587774 ADAMTS2O95450 1211 aa27.66■■■□□ 2.02
TRIM47-205ENST00000587774 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.66■■■□□ 2.02
TRIM47-205ENST00000587774 RXRBP28702 533 aa27.65■■■□□ 2.02
TRIM47-205ENST00000587774 FOXO3O43524 673 aa27.63■■■□□ 2.01
TRIM47-205ENST00000587774 XPCQ01831 940 aaPredicted RBP27.63■■■□□ 2.01
TRIM47-205ENST00000587774 SIRT1Q96EB6 747 aa27.63■■■□□ 2.01
TRIM47-205ENST00000587774 RGS12O14924 1447 aa27.62■■■□□ 2.01
TRIM47-205ENST00000587774 ITSN1Q15811 1721 aa27.61■■■□□ 2.01
TRIM47-205ENST00000587774 KIAA1210Q9ULL0 1709 aa27.61■■■□□ 2.01
TRIM47-205ENST00000587774 HRCP23327 699 aa27.6■■■□□ 2.01
TRIM47-205ENST00000587774 TRPM3Q9HCF6 1732 aaPredicted RBP27.59■■■□□ 2.01
TRIM47-205ENST00000587774 NGLY1Q96IV0 654 aa27.59■■■□□ 2.01
TRIM47-205ENST00000587774 PRAM1Q96QH2 718 aa27.59■■■□□ 2.01
TRIM47-205ENST00000587774 PLCH1Q4KWH8 1693 aa27.58■■■□□ 2.01
TRIM47-205ENST00000587774 EP400Q96L91 3159 aa27.57■■■□□ 2
TRIM47-205ENST00000587774 SAFB2Q14151 953 aaKnown RBP eCLIP27.57■■■□□ 2
TRIM47-205ENST00000587774 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
TRIM47-205ENST00000587774 DCAF11Q8TEB1 546 aa27.55■■■□□ 2
TRIM47-205ENST00000587774 KDM2AQ9Y2K7 1162 aa27.54■■■□□ 2
TRIM47-205ENST00000587774 ALS2Q96Q42 1657 aa27.53■■■□□ 2
TRIM47-205ENST00000587774 RBM6P78332 1123 aaKnown RBP27.53■■■□□ 2
TRIM47-205ENST00000587774 NWD2Q9ULI1 1742 aa27.53■■■□□ 2
TRIM47-205ENST00000587774 ANKARQ7Z5J8 1434 aa27.52■■■□□ 2
TRIM47-205ENST00000587774 ATRNO75882 1429 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 TNS3Q68CZ2 1445 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 SPATA31A3Q5VYP0 1347 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 UPF1Q92900 1129 aaKnown RBP eCLIP27.51■■□□□ 1.99
TRIM47-205ENST00000587774 POGKQ9P215 609 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 USP21Q9UK80 565 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 TULP4Q9NRJ4 1543 aa27.51■■□□□ 1.99
TRIM47-205ENST00000587774 CRYBG1Q9Y4K1 1723 aa27.5■■□□□ 1.99
TRIM47-205ENST00000587774 FNBP4Q8N3X1 1017 aaPredicted RBP27.5■■□□□ 1.99
TRIM47-205ENST00000587774 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
TRIM47-205ENST00000587774 BRWD3Q6RI45 1802 aa27.49■■□□□ 1.99
TRIM47-205ENST00000587774 PHF8Q9UPP1 1060 aa27.49■■□□□ 1.99
TRIM47-205ENST00000587774 BCL9LQ86UU0 1499 aa27.49■■□□□ 1.99
TRIM47-205ENST00000587774 TOPAZ1Q8N9V7 1692 aa27.47■■□□□ 1.99
TRIM47-205ENST00000587774 KRT28Q7Z3Y7 464 aa27.47■■□□□ 1.99
TRIM47-205ENST00000587774 STAC3Q96MF2 364 aa27.46■■□□□ 1.99
TRIM47-205ENST00000587774 TRPC5Q9UL62 973 aaPredicted RBP27.45■■□□□ 1.98
TRIM47-205ENST00000587774 HIRIP3Q9BW71 556 aaPredicted RBP27.44■■□□□ 1.98
TRIM47-205ENST00000587774 GLI3P10071 1580 aa27.43■■□□□ 1.98
TRIM47-205ENST00000587774 MINK1Q8N4C8 1332 aaPredicted RBP27.43■■□□□ 1.98
TRIM47-205ENST00000587774 SLIT2O94813 1529 aa27.43■■□□□ 1.98
TRIM47-205ENST00000587774 NRAPQ86VF7 1730 aa27.43■■□□□ 1.98
TRIM47-205ENST00000587774 SBNO1A3KN83 1393 aa27.42■■□□□ 1.98
TRIM47-205ENST00000587774 EIF3AQ14152 1382 aaKnown RBP27.42■■□□□ 1.98
TRIM47-205ENST00000587774 QRICH2Q9H0J4 1663 aa27.4■■□□□ 1.98
TRIM47-205ENST00000587774 PSME1Q06323 249 aa27.39■■□□□ 1.98
TRIM47-205ENST00000587774 PMFBP1Q8TBY8 1022 aa27.39■■□□□ 1.98
TRIM47-205ENST00000587774 PRR36Q9H6K5 1346 aa27.39■■□□□ 1.97
TRIM47-205ENST00000587774 ATP7BP35670 1465 aa27.38■■□□□ 1.97
TRIM47-205ENST00000587774 ARHGEF10O15013 1369 aa27.37■■□□□ 1.97
TRIM47-205ENST00000587774 PHRF1Q9P1Y6 1649 aaKnown RBP27.37■■□□□ 1.97
TRIM47-205ENST00000587774 COL14A1Q05707 1796 aaKnown RBP27.35■■□□□ 1.97
TRIM47-205ENST00000587774 WASLO00401 505 aaPredicted RBP27.34■■□□□ 1.97
TRIM47-205ENST00000587774 CABLES1Q8TDN4 633 aa27.34■■□□□ 1.97
TRIM47-205ENST00000587774 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
TRIM47-205ENST00000587774 RALGAPBQ86X10 1494 aa27.33■■□□□ 1.97
TRIM47-205ENST00000587774 TRPM1Q7Z4N2 1603 aa27.33■■□□□ 1.97
TRIM47-205ENST00000587774 PLEKHG5O94827 1062 aa27.32■■□□□ 1.96
TRIM47-205ENST00000587774 HAP1P54257 671 aaPredicted RBP27.32■■□□□ 1.96
TRIM47-205ENST00000587774 LMOD2Q6P5Q4 547 aa27.32■■□□□ 1.96
TRIM47-205ENST00000587774 UNC5CLQ8IV45 518 aa27.3■■□□□ 1.96
TRIM47-205ENST00000587774 GJD4Q96KN9 370 aaPredicted RBP27.3■■□□□ 1.96
TRIM47-205ENST00000587774 GPRASP1Q5JY77 1395 aa27.3■■□□□ 1.96
TRIM47-205ENST00000587774 NBPF1Q3BBV0 1214 aa27.23■■□□□ 1.95
TRIM47-205ENST00000587774 NGDNQ8NEJ9 315 aaKnown RBP27.22■■□□□ 1.95
TRIM47-205ENST00000587774 NUDT16Q96DE0 195 aaKnown RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms