RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 MORC1Q86VD1 984 aa25.85■■□□□ 1.73
MBD1-216ENST00000587605 ARHGEF28Q8N1W1 1705 aaKnown RBP25.85■■□□□ 1.73
MBD1-216ENST00000587605 ZFYVE9O95405 1425 aa25.84■■□□□ 1.73
MBD1-216ENST00000587605 CGNL1Q0VF96 1302 aa25.82■■□□□ 1.72
MBD1-216ENST00000587605 EVC2Q86UK5 1308 aa25.82■■□□□ 1.72
MBD1-216ENST00000587605 RICTORQ6R327 1708 aa25.81■■□□□ 1.72
MBD1-216ENST00000587605 NCBP3Q53F19 620 aaKnown RBP25.81■■□□□ 1.72
MBD1-216ENST00000587605 ANKRD36BQ8N2N9 1353 aa25.79■■□□□ 1.72
MBD1-216ENST00000587605 RUNDC1Q96C34 613 aa25.78■■□□□ 1.72
MBD1-216ENST00000587605 CFAP53Q96M91 514 aa25.78■■□□□ 1.72
MBD1-216ENST00000587605 IQSEC2Q5JU85 1478 aa25.78■■□□□ 1.72
MBD1-216ENST00000587605 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
MBD1-216ENST00000587605 DDRGK1Q96HY6 314 aa25.77■■□□□ 1.72
MBD1-216ENST00000587605 SLC12A5Q9H2X9 1139 aa25.77■■□□□ 1.72
MBD1-216ENST00000587605 SLC52A1Q9NWF4 448 aa25.76■■□□□ 1.72
MBD1-216ENST00000587605 PDE3AQ14432 1141 aa25.76■■□□□ 1.71
MBD1-216ENST00000587605 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
MBD1-216ENST00000587605 WWC1Q8IX03 1113 aa25.75■■□□□ 1.71
MBD1-216ENST00000587605 SPINK5Q9NQ38 1064 aaPredicted RBP25.75■■□□□ 1.71
MBD1-216ENST00000587605 NPM2Q86SE8 214 aaKnown RBP25.73■■□□□ 1.71
MBD1-216ENST00000587605 CCDC27Q2M243 656 aa25.72■■□□□ 1.71
MBD1-216ENST00000587605 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
MBD1-216ENST00000587605 AAMPQ13685 434 aa25.71■■□□□ 1.71
MBD1-216ENST00000587605 WDR63Q8IWG1 891 aa25.71■■□□□ 1.71
MBD1-216ENST00000587605 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
MBD1-216ENST00000587605 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
MBD1-216ENST00000587605 FAM161AQ3B820 660 aa25.68■■□□□ 1.7
MBD1-216ENST00000587605 RTL5Q5HYW3 569 aaPredicted RBP25.68■■□□□ 1.7
MBD1-216ENST00000587605 TMEM131LA2VDJ0 1609 aa25.67■■□□□ 1.7
MBD1-216ENST00000587605 BCAR3O75815 825 aa25.67■■□□□ 1.7
MBD1-216ENST00000587605 MTHFSP49914 203 aa25.66■■□□□ 1.7
MBD1-216ENST00000587605 DMRT2Q9Y5R5 561 aa25.65■■□□□ 1.7
MBD1-216ENST00000587605 CLTCQ00610 1675 aaKnown RBP25.65■■□□□ 1.7
MBD1-216ENST00000587605 IDI1Q13907 227 aa25.65■■□□□ 1.7
MBD1-216ENST00000587605 NBR1Q14596 966 aa25.65■■□□□ 1.7
MBD1-216ENST00000587605 TCP11L2Q8N4U5 519 aa25.65■■□□□ 1.7
MBD1-216ENST00000587605 ATAD2Q6PL18 1390 aa25.64■■□□□ 1.69
MBD1-216ENST00000587605 ABCC11Q96J66 1382 aa25.64■■□□□ 1.69
MBD1-216ENST00000587605 ADGRB2O60241 1585 aa25.63■■□□□ 1.69
MBD1-216ENST00000587605 MED14O60244 1454 aa25.63■■□□□ 1.69
MBD1-216ENST00000587605 ANKRD26Q9UPS8 1709 aa25.62■■□□□ 1.69
MBD1-216ENST00000587605 PPM1GO15355 546 aaPredicted RBP25.61■■□□□ 1.69
MBD1-216ENST00000587605 DEKP35659 375 aaKnown RBP25.61■■□□□ 1.69
MBD1-216ENST00000587605 USP35Q9P2H5 1018 aa25.61■■□□□ 1.69
MBD1-216ENST00000587605 MYO5BQ9ULV0 1848 aa25.61■■□□□ 1.69
MBD1-216ENST00000587605 YEATS2Q9ULM3 1422 aa25.61■■□□□ 1.69
MBD1-216ENST00000587605 CANXP27824 592 aaKnown RBP25.61■■□□□ 1.69
MBD1-216ENST00000587605 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
MBD1-216ENST00000587605 PTPRMP28827 1452 aa25.6■■□□□ 1.69
MBD1-216ENST00000587605 MYH16Q9H6N6 1097 aa25.59■■□□□ 1.69
MBD1-216ENST00000587605 CLUAP1Q96AJ1 413 aa25.58■■□□□ 1.69
MBD1-216ENST00000587605 RARSP54136 660 aaKnown RBP25.57■■□□□ 1.68
MBD1-216ENST00000587605 C8orf34Q49A92 452 aa25.57■■□□□ 1.68
MBD1-216ENST00000587605 SKAP1Q86WV1 359 aa25.57■■□□□ 1.68
MBD1-216ENST00000587605 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
MBD1-216ENST00000587605 CT47B1P0C2W7 299 aaPredicted RBP25.57■■□□□ 1.68
MBD1-216ENST00000587605 CABP2Q9NPB3 220 aa25.57■■□□□ 1.68
MBD1-216ENST00000587605 VIRMAQ69YN4 1812 aaKnown RBP25.57■■□□□ 1.68
MBD1-216ENST00000587605 A0A1W2PP64 1363 aa25.56■■□□□ 1.68
MBD1-216ENST00000587605 MAPK8IP3Q9UPT6 1336 aa25.56■■□□□ 1.68
MBD1-216ENST00000587605 BCL11AQ9H165 835 aa25.55■■□□□ 1.68
MBD1-216ENST00000587605 TERF2IPQ9NYB0 399 aa25.55■■□□□ 1.68
MBD1-216ENST00000587605 YTHDC2Q9H6S0 1430 aaKnown RBP25.55■■□□□ 1.68
MBD1-216ENST00000587605 NUTM2DQ5VT03 806 aaPredicted RBP25.55■■□□□ 1.68
MBD1-216ENST00000587605 PPP6R1Q9UPN7 881 aa25.55■■□□□ 1.68
MBD1-216ENST00000587605 ZMYM3Q14202 1370 aa25.53■■□□□ 1.68
MBD1-216ENST00000587605 PMFBP1Q8TBY8 1022 aa25.53■■□□□ 1.68
MBD1-216ENST00000587605 U2AF1L5P0DN76 240 aaPredicted RBP25.52■■□□□ 1.68
MBD1-216ENST00000587605 SRPK2P78362 688 aaKnown RBP25.52■■□□□ 1.68
MBD1-216ENST00000587605 U2AF1Q01081 240 aaKnown RBP eCLIP25.52■■□□□ 1.68
MBD1-216ENST00000587605 NEUROD2Q15784 382 aa25.52■■□□□ 1.68
MBD1-216ENST00000587605 RRP7AQ9Y3A4 280 aaKnown RBP25.52■■□□□ 1.68
MBD1-216ENST00000587605 COL3A1P02461 1466 aaPredicted RBP25.51■■□□□ 1.67
MBD1-216ENST00000587605 AGLP35573 1532 aa25.51■■□□□ 1.67
MBD1-216ENST00000587605 ALKQ9UM73 1620 aa25.51■■□□□ 1.67
MBD1-216ENST00000587605 DLC1Q96QB1 1528 aa25.49■■□□□ 1.67
MBD1-216ENST00000587605 RGS3P49796 1198 aa25.49■■□□□ 1.67
MBD1-216ENST00000587605 PANK1Q8TE04 598 aa25.49■■□□□ 1.67
MBD1-216ENST00000587605 COG6Q9Y2V7 657 aa25.49■■□□□ 1.67
MBD1-216ENST00000587605 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
MBD1-216ENST00000587605 IGHDP01880 384 aa25.47■■□□□ 1.67
MBD1-216ENST00000587605 PNNQ9H307 717 aaKnown RBP25.47■■□□□ 1.67
MBD1-216ENST00000587605 POGKQ9P215 609 aa25.47■■□□□ 1.67
MBD1-216ENST00000587605 STK26Q9P289 416 aa25.47■■□□□ 1.67
MBD1-216ENST00000587605 NLRP1Q9C000 1473 aa25.47■■□□□ 1.67
MBD1-216ENST00000587605 CD163L1Q9NR16 1453 aa25.47■■□□□ 1.67
MBD1-216ENST00000587605 IL16Q14005 1332 aa25.46■■□□□ 1.67
MBD1-216ENST00000587605 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
MBD1-216ENST00000587605 FRAT1Q92837 279 aaPredicted RBP25.46■■□□□ 1.67
MBD1-216ENST00000587605 KIF20BQ96Q89 1820 aa25.46■■□□□ 1.67
MBD1-216ENST00000587605 PRAM1Q96QH2 718 aa25.45■■□□□ 1.67
MBD1-216ENST00000587605 ARHGEF40Q8TER5 1519 aa25.45■■□□□ 1.66
MBD1-216ENST00000587605 SAFB2Q14151 953 aaKnown RBP eCLIP25.44■■□□□ 1.66
MBD1-216ENST00000587605 PLEKHF1Q96S99 279 aa25.43■■□□□ 1.66
MBD1-216ENST00000587605 MINK1Q8N4C8 1332 aaPredicted RBP25.42■■□□□ 1.66
MBD1-216ENST00000587605 CDC42BPGQ6DT37 1551 aa25.41■■□□□ 1.66
MBD1-216ENST00000587605 FYB1O15117 783 aa25.41■■□□□ 1.66
MBD1-216ENST00000587605 NEFMP07197 916 aa25.41■■□□□ 1.66
MBD1-216ENST00000587605 LAS1LQ9Y4W2 734 aaKnown RBP25.41■■□□□ 1.66
MBD1-216ENST00000587605 PNPLA6Q8IY17 1366 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms