RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 VGFO15240 615 aaPredicted RBP26.98■■□□□ 1.91
SOCS3-202ENST00000587578 SRCAPQ6ZRS2 3230 aa26.94■■□□□ 1.9
SOCS3-202ENST00000587578 COL22A1Q8NFW1 1626 aaPredicted RBP26.93■■□□□ 1.9
SOCS3-202ENST00000587578 PCGF6Q9BYE7 350 aa26.92■■□□□ 1.9
SOCS3-202ENST00000587578 RPGRIP1LQ68CZ1 1315 aa26.91■■□□□ 1.9
SOCS3-202ENST00000587578 CDC42BPGQ6DT37 1551 aa26.9■■□□□ 1.9
SOCS3-202ENST00000587578 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SOCS3-202ENST00000587578 MYOM2P54296 1465 aa26.88■■□□□ 1.89
SOCS3-202ENST00000587578 FOXD1Q16676 465 aa26.88■■□□□ 1.89
SOCS3-202ENST00000587578 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
SOCS3-202ENST00000587578 EP400Q96L91 3159 aa26.87■■□□□ 1.89
SOCS3-202ENST00000587578 PXDNQ92626 1479 aa26.87■■□□□ 1.89
SOCS3-202ENST00000587578 ATRNO75882 1429 aa26.86■■□□□ 1.89
SOCS3-202ENST00000587578 TRPC5Q9UL62 973 aaPredicted RBP26.85■■□□□ 1.89
SOCS3-202ENST00000587578 ANKRD30BQ9BXX2 1392 aa26.84■■□□□ 1.89
SOCS3-202ENST00000587578 XPCQ01831 940 aaPredicted RBP26.84■■□□□ 1.89
SOCS3-202ENST00000587578 ESCO1Q5FWF5 840 aa26.84■■□□□ 1.89
SOCS3-202ENST00000587578 ADGRF5Q8IZF2 1346 aa26.84■■□□□ 1.89
SOCS3-202ENST00000587578 ATAD2Q6PL18 1390 aa26.84■■□□□ 1.89
SOCS3-202ENST00000587578 CCDC144AA2RUR9 1427 aa26.83■■□□□ 1.89
SOCS3-202ENST00000587578 MARF1Q9Y4F3 1742 aaKnown RBP26.82■■□□□ 1.88
SOCS3-202ENST00000587578 NPHP3Q7Z494 1330 aa26.82■■□□□ 1.88
SOCS3-202ENST00000587578 BCL9LQ86UU0 1499 aa26.81■■□□□ 1.88
SOCS3-202ENST00000587578 IFT172Q9UG01 1749 aa26.8■■□□□ 1.88
SOCS3-202ENST00000587578 DHX57Q6P158 1386 aaKnown RBP26.8■■□□□ 1.88
SOCS3-202ENST00000587578 NUTM2FA1L443 756 aa26.79■■□□□ 1.88
SOCS3-202ENST00000587578 FOXO3O43524 673 aa26.79■■□□□ 1.88
SOCS3-202ENST00000587578 WAPLQ7Z5K2 1190 aa26.79■■□□□ 1.88
SOCS3-202ENST00000587578 STK26Q9P289 416 aa26.79■■□□□ 1.88
SOCS3-202ENST00000587578 TECPR2O15040 1411 aa26.79■■□□□ 1.88
SOCS3-202ENST00000587578 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
SOCS3-202ENST00000587578 PLEKHH1Q9ULM0 1364 aa26.77■■□□□ 1.88
SOCS3-202ENST00000587578 RGL3Q3MIN7 710 aa26.76■■□□□ 1.87
SOCS3-202ENST00000587578 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
SOCS3-202ENST00000587578 LRPPRCP42704 1394 aaKnown RBP26.75■■□□□ 1.87
SOCS3-202ENST00000587578 TMEM132EQ6IEE7 984 aa26.74■■□□□ 1.87
SOCS3-202ENST00000587578 FMN2Q9NZ56 1722 aa26.73■■□□□ 1.87
SOCS3-202ENST00000587578 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
SOCS3-202ENST00000587578 PIK3C2GO75747 1445 aa26.71■■□□□ 1.87
SOCS3-202ENST00000587578 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.7■■□□□ 1.87
SOCS3-202ENST00000587578 GJD4Q96KN9 370 aaPredicted RBP26.68■■□□□ 1.86
SOCS3-202ENST00000587578 GLI3P10071 1580 aa26.67■■□□□ 1.86
SOCS3-202ENST00000587578 KIF1AQ12756 1690 aa26.67■■□□□ 1.86
SOCS3-202ENST00000587578 SPATA31A3Q5VYP0 1347 aa26.66■■□□□ 1.86
SOCS3-202ENST00000587578 YTHDC2Q9H6S0 1430 aaKnown RBP26.66■■□□□ 1.86
SOCS3-202ENST00000587578 SLIT2O94813 1529 aa26.66■■□□□ 1.86
SOCS3-202ENST00000587578 RGPD8O14715 1765 aaPredicted RBP26.66■■□□□ 1.86
SOCS3-202ENST00000587578 USP32Q8NFA0 1604 aa26.65■■□□□ 1.86
SOCS3-202ENST00000587578 RALGAPBQ86X10 1494 aa26.65■■□□□ 1.86
SOCS3-202ENST00000587578 ZRANB1Q9UGI0 708 aa26.62■■□□□ 1.85
SOCS3-202ENST00000587578 BRWD3Q6RI45 1802 aa26.62■■□□□ 1.85
SOCS3-202ENST00000587578 UNC5CLQ8IV45 518 aa26.61■■□□□ 1.85
SOCS3-202ENST00000587578 KRT28Q7Z3Y7 464 aa26.6■■□□□ 1.85
SOCS3-202ENST00000587578 CLSPNQ9HAW4 1339 aa26.58■■□□□ 1.85
SOCS3-202ENST00000587578 TNS3Q68CZ2 1445 aa26.57■■□□□ 1.84
SOCS3-202ENST00000587578 ABCA3Q99758 1704 aa26.57■■□□□ 1.84
SOCS3-202ENST00000587578 CCDC125Q86Z20 511 aa26.57■■□□□ 1.84
SOCS3-202ENST00000587578 PLCH1Q4KWH8 1693 aa26.57■■□□□ 1.84
SOCS3-202ENST00000587578 NRXN1Q9ULB1 1477 aa26.56■■□□□ 1.84
SOCS3-202ENST00000587578 CABLES1Q8TDN4 633 aa26.56■■□□□ 1.84
SOCS3-202ENST00000587578 STAC3Q96MF2 364 aa26.56■■□□□ 1.84
SOCS3-202ENST00000587578 PLEKHG5O94827 1062 aa26.55■■□□□ 1.84
SOCS3-202ENST00000587578 C14orf93Q9H972 538 aaKnown RBP26.55■■□□□ 1.84
SOCS3-202ENST00000587578 CFAP70Q5T0N1 1121 aa26.54■■□□□ 1.84
SOCS3-202ENST00000587578 PHF8Q9UPP1 1060 aa26.54■■□□□ 1.84
SOCS3-202ENST00000587578 SIRT1Q96EB6 747 aa26.53■■□□□ 1.84
SOCS3-202ENST00000587578 BLMP54132 1417 aaPredicted RBP26.53■■□□□ 1.84
SOCS3-202ENST00000587578 SAFB2Q14151 953 aaKnown RBP eCLIP26.52■■□□□ 1.84
SOCS3-202ENST00000587578 NWD2Q9ULI1 1742 aa26.51■■□□□ 1.83
SOCS3-202ENST00000587578 HAP1P54257 671 aaPredicted RBP26.5■■□□□ 1.83
SOCS3-202ENST00000587578 SEPT12Q8IYM1 358 aa26.49■■□□□ 1.83
SOCS3-202ENST00000587578 PRAM1Q96QH2 718 aa26.49■■□□□ 1.83
SOCS3-202ENST00000587578 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
SOCS3-202ENST00000587578 VPS72Q15906 364 aa26.48■■□□□ 1.83
SOCS3-202ENST00000587578 DEFB132Q7Z7B7 95 aa26.48■■□□□ 1.83
SOCS3-202ENST00000587578 SBNO1A3KN83 1393 aa26.47■■□□□ 1.83
SOCS3-202ENST00000587578 PSME1Q06323 249 aa26.47■■□□□ 1.83
SOCS3-202ENST00000587578 LMOD2Q6P5Q4 547 aa26.47■■□□□ 1.83
SOCS3-202ENST00000587578 PMFBP1Q8TBY8 1022 aa26.45■■□□□ 1.82
SOCS3-202ENST00000587578 DLC1Q96QB1 1528 aa26.44■■□□□ 1.82
SOCS3-202ENST00000587578 ADGRB2O60241 1585 aa26.44■■□□□ 1.82
SOCS3-202ENST00000587578 ARHGEF10O15013 1369 aa26.44■■□□□ 1.82
SOCS3-202ENST00000587578 TRPM3Q9HCF6 1732 aaPredicted RBP26.43■■□□□ 1.82
SOCS3-202ENST00000587578 CCDC9Q9Y3X0 531 aaKnown RBP26.43■■□□□ 1.82
SOCS3-202ENST00000587578 NRAPQ86VF7 1730 aa26.42■■□□□ 1.82
SOCS3-202ENST00000587578 ADGRB1O14514 1584 aa26.42■■□□□ 1.82
SOCS3-202ENST00000587578 ANKARQ7Z5J8 1434 aa26.42■■□□□ 1.82
SOCS3-202ENST00000587578 DCAF11Q8TEB1 546 aa26.42■■□□□ 1.82
SOCS3-202ENST00000587578 FAM83GA6ND36 823 aa26.41■■□□□ 1.82
SOCS3-202ENST00000587578 ONECUT3O60422 494 aaPredicted RBP26.41■■□□□ 1.82
SOCS3-202ENST00000587578 NEUROD1Q13562 356 aa26.41■■□□□ 1.82
SOCS3-202ENST00000587578 ALS2Q96Q42 1657 aa26.39■■□□□ 1.82
SOCS3-202ENST00000587578 KRT27Q7Z3Y8 459 aa26.39■■□□□ 1.82
SOCS3-202ENST00000587578 CCER1Q8TC90 406 aaPredicted RBP26.39■■□□□ 1.82
SOCS3-202ENST00000587578 POGKQ9P215 609 aa26.39■■□□□ 1.82
SOCS3-202ENST00000587578 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
SOCS3-202ENST00000587578 L3MBTL2Q969R5 705 aa26.37■■□□□ 1.81
SOCS3-202ENST00000587578 SF3B2Q13435 895 aaKnown RBP26.36■■□□□ 1.81
SOCS3-202ENST00000587578 PRR36Q9H6K5 1346 aa26.36■■□□□ 1.81
SOCS3-202ENST00000587578 TRAK1Q9UPV9 953 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms