RNA–Protein interactions for RNA: ENST00000587563.5

RPRD1A-205, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-205ENST00000587563 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
RPRD1A-205ENST00000587563 DDX11L8A8MPP1 907 aa11.3□□□□□ -0.6
RPRD1A-205ENST00000587563 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
RPRD1A-205ENST00000587563 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
RPRD1A-205ENST00000587563 GCGRP47871 477 aa11.29□□□□□ -0.6
RPRD1A-205ENST00000587563 TRIM32Q13049 653 aa11.29□□□□□ -0.6
RPRD1A-205ENST00000587563 P3H3Q8IVL6 736 aa11.29□□□□□ -0.6
RPRD1A-205ENST00000587563 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
RPRD1A-205ENST00000587563 Q3C1V9 767 aa11.26□□□□□ -0.61
RPRD1A-205ENST00000587563 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
RPRD1A-205ENST00000587563 FECHP22830 423 aa11.25□□□□□ -0.61
RPRD1A-205ENST00000587563 J3QL48 77 aa11.23□□□□□ -0.61
RPRD1A-205ENST00000587563 GNPATO15228 680 aa11.23□□□□□ -0.61
RPRD1A-205ENST00000587563 MMP16P51512 607 aa11.22□□□□□ -0.61
RPRD1A-205ENST00000587563 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
RPRD1A-205ENST00000587563 NPAS3Q8IXF0 933 aa11.21□□□□□ -0.61
RPRD1A-205ENST00000587563 LCE2CQ5TA81 110 aa11.2□□□□□ -0.62
RPRD1A-205ENST00000587563 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
RPRD1A-205ENST00000587563 HPS1Q92902 700 aa11.2□□□□□ -0.62
RPRD1A-205ENST00000587563 SEMA3EO15041 775 aa11.19□□□□□ -0.62
RPRD1A-205ENST00000587563 NXF1Q9UBU9 619 aaKnown RBP11.19□□□□□ -0.62
RPRD1A-205ENST00000587563 WNT7BP56706 349 aa11.18□□□□□ -0.62
RPRD1A-205ENST00000587563 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
RPRD1A-205ENST00000587563 IRF7Q92985 503 aa11.17□□□□□ -0.62
RPRD1A-205ENST00000587563 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
RPRD1A-205ENST00000587563 RC3H1Q5TC82 1133 aaKnown RBP11.15□□□□□ -0.62
RPRD1A-205ENST00000587563 USB1Q9BQ65 265 aaKnown RBP11.15□□□□□ -0.62
RPRD1A-205ENST00000587563 DXOO77932 396 aaKnown RBP11.14□□□□□ -0.63
RPRD1A-205ENST00000587563 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
RPRD1A-205ENST00000587563 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
RPRD1A-205ENST00000587563 ALDH1A1P00352 501 aa11.1□□□□□ -0.63
RPRD1A-205ENST00000587563 GMPRP36959 345 aa11.1□□□□□ -0.63
RPRD1A-205ENST00000587563 RBM26Q5T8P6 1007 aaKnown RBP11.1□□□□□ -0.63
RPRD1A-205ENST00000587563 NLRP7Q8WX94 980 aa11.1□□□□□ -0.63
RPRD1A-205ENST00000587563 LOC100996750A0A140TA64 210 aa11.07□□□□□ -0.64
RPRD1A-205ENST00000587563 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
RPRD1A-205ENST00000587563 USP46P62068 366 aa11.07□□□□□ -0.64
RPRD1A-205ENST00000587563 KRTAP4-6Q9BYQ5 205 aa11.07□□□□□ -0.64
RPRD1A-205ENST00000587563 KDM4AO75164 1064 aa11.06□□□□□ -0.64
RPRD1A-205ENST00000587563 SKOR1P84550 965 aa11.06□□□□□ -0.64
RPRD1A-205ENST00000587563 GPR37O15354 613 aa11.05□□□□□ -0.64
RPRD1A-205ENST00000587563 CAPN5O15484 640 aaPredicted RBP11.05□□□□□ -0.64
RPRD1A-205ENST00000587563 WASF2Q9Y6W5 498 aa11.05□□□□□ -0.64
RPRD1A-205ENST00000587563 H3BM21 787 aa11.04□□□□□ -0.64
RPRD1A-205ENST00000587563 CD46P15529 392 aa11.04□□□□□ -0.64
RPRD1A-205ENST00000587563 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
RPRD1A-205ENST00000587563 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
RPRD1A-205ENST00000587563 EHBP1Q8NDI1 1231 aa11.03□□□□□ -0.64
RPRD1A-205ENST00000587563 TRIM46Q7Z4K8 759 aa11.01□□□□□ -0.65
RPRD1A-205ENST00000587563 SIAH2O43255 324 aa11□□□□□ -0.65
RPRD1A-205ENST00000587563 BMP1P13497 986 aa11□□□□□ -0.65
RPRD1A-205ENST00000587563 JUNDP17535 347 aa11□□□□□ -0.65
RPRD1A-205ENST00000587563 VEGFBP49765 207 aa10.96□□□□□ -0.65
RPRD1A-205ENST00000587563 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
RPRD1A-205ENST00000587563 HOXA2O43364 376 aa10.95□□□□□ -0.66
RPRD1A-205ENST00000587563 GPIHBP1Q8IV16 184 aa10.95□□□□□ -0.66
RPRD1A-205ENST00000587563 ERBB4Q15303 1308 aa10.94□□□□□ -0.66
RPRD1A-205ENST00000587563 ZFP42Q96MM3 310 aa10.94□□□□□ -0.66
RPRD1A-205ENST00000587563 SCARF1Q14162 830 aa10.93□□□□□ -0.66
RPRD1A-205ENST00000587563 RETREG3Q86VR2 466 aa10.93□□□□□ -0.66
RPRD1A-205ENST00000587563 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
RPRD1A-205ENST00000587563 RTN4Q9NQC3 1192 aaKnown RBP10.9□□□□□ -0.66
RPRD1A-205ENST00000587563 VSIG8P0DPA2 414 aa10.89□□□□□ -0.67
RPRD1A-205ENST00000587563 SH3BP2P78314 561 aa10.89□□□□□ -0.67
RPRD1A-205ENST00000587563 SUZ12Q15022 739 aaKnown RBP10.89□□□□□ -0.67
RPRD1A-205ENST00000587563 HLA-CQ95604 372 aa10.89□□□□□ -0.67
RPRD1A-205ENST00000587563 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
RPRD1A-205ENST00000587563 PTCRAQ6ISU1 281 aaPredicted RBP10.88□□□□□ -0.67
RPRD1A-205ENST00000587563 MPNDQ8N594 471 aa10.88□□□□□ -0.67
RPRD1A-205ENST00000587563 CCNYL3P0C7X3 344 aa10.87□□□□□ -0.67
RPRD1A-205ENST00000587563 MRPL14Q6P1L8 145 aaKnown RBP10.87□□□□□ -0.67
RPRD1A-205ENST00000587563 MS4A1P11836 297 aa10.86□□□□□ -0.67
RPRD1A-205ENST00000587563 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
RPRD1A-205ENST00000587563 VARSP26640 1264 aaKnown RBP10.85□□□□□ -0.67
RPRD1A-205ENST00000587563 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
RPRD1A-205ENST00000587563 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
RPRD1A-205ENST00000587563 SYMPKQ92797 1274 aaKnown RBP10.84□□□□□ -0.67
RPRD1A-205ENST00000587563 ADH1CP00326 375 aa10.83□□□□□ -0.68
RPRD1A-205ENST00000587563 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
RPRD1A-205ENST00000587563 NNTQ13423 1086 aa10.83□□□□□ -0.68
RPRD1A-205ENST00000587563 PTPRNQ16849 979 aa10.83□□□□□ -0.68
RPRD1A-205ENST00000587563 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
RPRD1A-205ENST00000587563 IRF6O14896 467 aa10.81□□□□□ -0.68
RPRD1A-205ENST00000587563 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
RPRD1A-205ENST00000587563 EVA1BQ9NVM1 165 aa10.81□□□□□ -0.68
RPRD1A-205ENST00000587563 TLL2Q9Y6L7 1015 aa10.81□□□□□ -0.68
RPRD1A-205ENST00000587563 C6orf229H3BNL8 230 aa10.8□□□□□ -0.68
RPRD1A-205ENST00000587563 CLCN1P35523 988 aa10.8□□□□□ -0.68
RPRD1A-205ENST00000587563 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
RPRD1A-205ENST00000587563 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
RPRD1A-205ENST00000587563 RNF225M0QZC1 329 aaPredicted RBP10.79□□□□□ -0.68
RPRD1A-205ENST00000587563 FDX1P10109 184 aa10.79□□□□□ -0.68
RPRD1A-205ENST00000587563 TIMP2P16035 220 aa10.79□□□□□ -0.68
RPRD1A-205ENST00000587563 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
RPRD1A-205ENST00000587563 KCNH2Q12809 1159 aa10.78□□□□□ -0.68
RPRD1A-205ENST00000587563 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
RPRD1A-205ENST00000587563 MAN1A2O60476 641 aa10.77□□□□□ -0.69
RPRD1A-205ENST00000587563 LINC01559Q495D7 138 aa10.77□□□□□ -0.69
RPRD1A-205ENST00000587563 TMEM151AQ8N4L1 468 aa10.77□□□□□ -0.69
RPRD1A-205ENST00000587563 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms