RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 C19orf44Q9H6X5 657 aa12.54□□□□□ -0.4
NEDD4L-218ENST00000587547 ASXL1Q8IXJ9 1541 aa12.52□□□□□ -0.4
NEDD4L-218ENST00000587547 UNC13BO14795 1591 aa12.52□□□□□ -0.4
NEDD4L-218ENST00000587547 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.41
NEDD4L-218ENST00000587547 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.41
NEDD4L-218ENST00000587547 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
NEDD4L-218ENST00000587547 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
NEDD4L-218ENST00000587547 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
NEDD4L-218ENST00000587547 PPP1R15AO75807 674 aaPredicted RBP12.5□□□□□ -0.41
NEDD4L-218ENST00000587547 DDX17Q92841 729 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-218ENST00000587547 TBX22Q9Y458 520 aa12.5□□□□□ -0.41
NEDD4L-218ENST00000587547 KANK1Q14678 1352 aa12.5□□□□□ -0.41
NEDD4L-218ENST00000587547 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
NEDD4L-218ENST00000587547 EP400Q96L91 3159 aa12.49□□□□□ -0.41
NEDD4L-218ENST00000587547 SLC52A1Q9NWF4 448 aa12.49□□□□□ -0.41
NEDD4L-218ENST00000587547 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
NEDD4L-218ENST00000587547 ADAMTS2O95450 1211 aa12.48□□□□□ -0.41
NEDD4L-218ENST00000587547 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
NEDD4L-218ENST00000587547 IQGAP3Q86VI3 1631 aa12.48□□□□□ -0.41
NEDD4L-218ENST00000587547 MST1RQ04912 1400 aa12.47□□□□□ -0.41
NEDD4L-218ENST00000587547 MYO5BQ9ULV0 1848 aa12.47□□□□□ -0.41
NEDD4L-218ENST00000587547 MIER1Q8N108 512 aa12.47□□□□□ -0.41
NEDD4L-218ENST00000587547 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
NEDD4L-218ENST00000587547 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
NEDD4L-218ENST00000587547 DCCP43146 1447 aa12.45□□□□□ -0.42
NEDD4L-218ENST00000587547 USP21Q9UK80 565 aa12.45□□□□□ -0.42
NEDD4L-218ENST00000587547 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
NEDD4L-218ENST00000587547 NUP155O75694 1391 aa12.44□□□□□ -0.42
NEDD4L-218ENST00000587547 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
NEDD4L-218ENST00000587547 AMOTL2Q9Y2J4 779 aa12.44□□□□□ -0.42
NEDD4L-218ENST00000587547 ATRNO75882 1429 aa12.44□□□□□ -0.42
NEDD4L-218ENST00000587547 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
NEDD4L-218ENST00000587547 TRPC5Q9UL62 973 aaPredicted RBP12.43□□□□□ -0.42
NEDD4L-218ENST00000587547 TRPM2O94759 1503 aa12.42□□□□□ -0.42
NEDD4L-218ENST00000587547 E9PCH4 1651 aa12.42□□□□□ -0.42
NEDD4L-218ENST00000587547 HDGFP51858 240 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-218ENST00000587547 LRP5O75197 1615 aa12.41□□□□□ -0.42
NEDD4L-218ENST00000587547 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
NEDD4L-218ENST00000587547 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-218ENST00000587547 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
NEDD4L-218ENST00000587547 HRCP23327 699 aa12.4□□□□□ -0.42
NEDD4L-218ENST00000587547 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEDD4L-218ENST00000587547 RPRD2Q5VT52 1461 aaKnown RBP12.4□□□□□ -0.43
NEDD4L-218ENST00000587547 ECM2O94769 699 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-218ENST00000587547 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
NEDD4L-218ENST00000587547 SPHKAPQ2M3C7 1700 aa12.39□□□□□ -0.43
NEDD4L-218ENST00000587547 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-218ENST00000587547 ACIN1Q9UKV3 1341 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-218ENST00000587547 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
NEDD4L-218ENST00000587547 BCL9LQ86UU0 1499 aa12.37□□□□□ -0.43
NEDD4L-218ENST00000587547 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
NEDD4L-218ENST00000587547 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
NEDD4L-218ENST00000587547 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
NEDD4L-218ENST00000587547 C1orf167Q5SNV9 1468 aa12.35□□□□□ -0.43
NEDD4L-218ENST00000587547 NRXN3Q9Y4C0 1643 aa12.35□□□□□ -0.43
NEDD4L-218ENST00000587547 SOS2Q07890 1332 aaPredicted RBP12.35□□□□□ -0.43
NEDD4L-218ENST00000587547 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-218ENST00000587547 PLEKHG5O94827 1062 aa12.34□□□□□ -0.43
NEDD4L-218ENST00000587547 NALCNQ8IZF0 1738 aa12.34□□□□□ -0.43
NEDD4L-218ENST00000587547 LAMC1P11047 1609 aa12.33□□□□□ -0.43
NEDD4L-218ENST00000587547 METP08581 1390 aa12.33□□□□□ -0.44
NEDD4L-218ENST00000587547 KIF1BO60333 1816 aa12.33□□□□□ -0.44
NEDD4L-218ENST00000587547 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-218ENST00000587547 GJD4Q96KN9 370 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-218ENST00000587547 MYOM2P54296 1465 aa12.33□□□□□ -0.44
NEDD4L-218ENST00000587547 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
NEDD4L-218ENST00000587547 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
NEDD4L-218ENST00000587547 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-218ENST00000587547 RALGAPBQ86X10 1494 aa12.3□□□□□ -0.44
NEDD4L-218ENST00000587547 CCER1Q8TC90 406 aaPredicted RBP12.3□□□□□ -0.44
NEDD4L-218ENST00000587547 GLI3P10071 1580 aa12.3□□□□□ -0.44
NEDD4L-218ENST00000587547 CLTCL1P53675 1640 aa12.29□□□□□ -0.44
NEDD4L-218ENST00000587547 RGL2O15211 777 aa12.27□□□□□ -0.45
NEDD4L-218ENST00000587547 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
NEDD4L-218ENST00000587547 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
NEDD4L-218ENST00000587547 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
NEDD4L-218ENST00000587547 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
NEDD4L-218ENST00000587547 UNC5CLQ8IV45 518 aa12.25□□□□□ -0.45
NEDD4L-218ENST00000587547 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-218ENST00000587547 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
NEDD4L-218ENST00000587547 SLIT2O94813 1529 aa12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 YY1P25490 414 aa12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 XPCQ01831 940 aaPredicted RBP12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 PXDNQ92626 1479 aa12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 ANKRD30BQ9BXX2 1392 aa12.24□□□□□ -0.45
NEDD4L-218ENST00000587547 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
NEDD4L-218ENST00000587547 ROBO2Q9HCK4 1378 aa12.23□□□□□ -0.45
NEDD4L-218ENST00000587547 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
NEDD4L-218ENST00000587547 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-218ENST00000587547 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
NEDD4L-218ENST00000587547 NEUROD1Q13562 356 aa12.21□□□□□ -0.45
NEDD4L-218ENST00000587547 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
NEDD4L-218ENST00000587547 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
NEDD4L-218ENST00000587547 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
NEDD4L-218ENST00000587547 BAG6P46379 1132 aa12.2□□□□□ -0.46
NEDD4L-218ENST00000587547 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
NEDD4L-218ENST00000587547 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
NEDD4L-218ENST00000587547 PPLO60437 1756 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms