RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
CACNA1A-209ENST00000587525 GOLGA6L22H0YM25 854 aa17.22■□□□□ 0.35
CACNA1A-209ENST00000587525 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.35
CACNA1A-209ENST00000587525 FBXO31Q5XUX0 539 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 PRAG1Q86YV5 1406 aa17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 KIF14Q15058 1648 aa17.2■□□□□ 0.34
CACNA1A-209ENST00000587525 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
CACNA1A-209ENST00000587525 LRRIQ1Q96JM4 1722 aa17.19■□□□□ 0.34
CACNA1A-209ENST00000587525 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
CACNA1A-209ENST00000587525 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
CACNA1A-209ENST00000587525 RALGAPBQ86X10 1494 aa17.17■□□□□ 0.34
CACNA1A-209ENST00000587525 MPNDQ8N594 471 aa17.17■□□□□ 0.34
CACNA1A-209ENST00000587525 PTMAP06454 111 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 PDE3AQ14432 1141 aa17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 RTF1Q92541 710 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 ERCC6L2Q5T890 1561 aa17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
CACNA1A-209ENST00000587525 SYCP2Q9BX26 1530 aa17.15■□□□□ 0.34
CACNA1A-209ENST00000587525 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
CACNA1A-209ENST00000587525 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-209ENST00000587525 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-209ENST00000587525 CDK19Q9BWU1 502 aa17.14■□□□□ 0.33
CACNA1A-209ENST00000587525 RNF123Q5XPI4 1314 aa17.14■□□□□ 0.33
CACNA1A-209ENST00000587525 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
CACNA1A-209ENST00000587525 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-209ENST00000587525 IDI1Q13907 227 aa17.13■□□□□ 0.33
CACNA1A-209ENST00000587525 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
CACNA1A-209ENST00000587525 EMILIN1Q9Y6C2 1016 aa17.13■□□□□ 0.33
CACNA1A-209ENST00000587525 TRIM27P14373 513 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 NGDNQ8NEJ9 315 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 PANK2Q9BZ23 570 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
CACNA1A-209ENST00000587525 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 COG3Q96JB2 828 aa17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
CACNA1A-209ENST00000587525 AMPHP49418 695 aa17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 A2MP01023 1474 aa17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 NOS1P29475 1434 aa17.1■□□□□ 0.33
CACNA1A-209ENST00000587525 TRAK2O60296 914 aa17.09■□□□□ 0.33
CACNA1A-209ENST00000587525 RBM10P98175 930 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-209ENST00000587525 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-209ENST00000587525 KCNJ4P48050 445 aa17.08■□□□□ 0.32
CACNA1A-209ENST00000587525 NME9Q86XW9 330 aa17.08■□□□□ 0.32
CACNA1A-209ENST00000587525 NAP1L2Q9ULW6 460 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-209ENST00000587525 GBP4Q96PP9 640 aa17.08■□□□□ 0.32
CACNA1A-209ENST00000587525 DNMT1P26358 1616 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 KRT24Q2M2I5 525 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 FAM13BQ9NYF5 915 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
CACNA1A-209ENST00000587525 NKTRP30414 1462 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 MCM10Q7L590 875 aa17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 ABCA8O94911 1581 aa17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 TSHZ3Q63HK5 1081 aa17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
CACNA1A-209ENST00000587525 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
CACNA1A-209ENST00000587525 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
CACNA1A-209ENST00000587525 DTNBO60941 627 aa17.05■□□□□ 0.32
CACNA1A-209ENST00000587525 BCORL1Q5H9F3 1711 aa17.04■□□□□ 0.32
CACNA1A-209ENST00000587525 MCTP1Q6DN14 999 aa17.04■□□□□ 0.32
CACNA1A-209ENST00000587525 BCL11BQ9C0K0 894 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-209ENST00000587525 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-209ENST00000587525 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
CACNA1A-209ENST00000587525 UBE2Q2Q8WVN8 375 aa17.03■□□□□ 0.32
CACNA1A-209ENST00000587525 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
CACNA1A-209ENST00000587525 ZNF330Q9Y3S2 320 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-209ENST00000587525 MAP4K4O95819 1239 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-209ENST00000587525 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
CACNA1A-209ENST00000587525 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-209ENST00000587525 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
CACNA1A-209ENST00000587525 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-209ENST00000587525 F6X3S4 739 aa17.02■□□□□ 0.32
CACNA1A-209ENST00000587525 CALD1Q05682 793 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-209ENST00000587525 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
CACNA1A-209ENST00000587525 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
CACNA1A-209ENST00000587525 MCM4P33991 863 aa17■□□□□ 0.31
CACNA1A-209ENST00000587525 ABCF1Q8NE71 845 aaKnown RBP eCLIP17■□□□□ 0.31
CACNA1A-209ENST00000587525 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms